FFCP PHASE1:Hg19::chr2:85360499..85360598,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11640 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCS4 | |||
|association_with_transcript=0bp_to_ENST00000282111,NM_031283_5end | |||
|cluster_id=chr2:85360499..85360598,+ | |||
|description=CAGE_peak_1_at_TCF7L1_5end | |||
|id=chr2:85360499..85360598,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.01e-18!248;CL:0000220!1.54e-17!246;CL:0000222!5.99e-13!119;CL:0002139!4.44e-11!24;CL:0000115!1.18e-10!35;CL:0002078!1.29e-10!44;CL:0000055!2.99e-10!180;CL:0000213!2.47e-09!57;CL:0000215!2.47e-09!57;CL:0000071!2.77e-09!18;CL:0002546!2.77e-09!18;CL:0000183!3.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.03e-11;24!CL:0000115;1.61e-09;36!CL:0000071;1.95e-09;18!CL:0002078;7.88e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.47e-18,250;CL:0000222,9.50e-14,121;CL:0000115,1.91e-11,36;CL:0002078,2.30e-11,45;CL:0002139,3.13e-11,24;CL:0000213,5.44e-10,58;CL:0000215,5.44e-10,58;CL:0000071,2.08e-09,18;CL:0002546,2.08e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.95e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.35e-19!312;UBERON:0000483!1.92e-18!309;UBERON:0004872!3.09e-17!84;UBERON:0000468!4.93e-17!659;UBERON:0004111!3.00e-16!241;UBERON:0002049!4.60e-16!79;UBERON:0007798!4.60e-16!79;UBERON:0000055!1.23e-15!69;UBERON:0000477!2.47e-15!286;UBERON:0001981!8.54e-15!60;UBERON:0007500!8.54e-15!60;UBERON:0004537!8.54e-15!60;UBERON:0006965!8.54e-15!60;UBERON:0000475!2.72e-14!365;UBERON:0003914!2.99e-14!118;UBERON:0000481!6.67e-14!347;UBERON:0000025!9.34e-12!194;UBERON:0000922!1.34e-11!612;UBERON:0000467!2.05e-11!625;UBERON:0000480!3.81e-11!626;UBERON:0002100!4.17e-11!216;UBERON:0001009!6.04e-11!113;UBERON:0004535!2.33e-10!110;UBERON:0000490!2.46e-10!138;UBERON:0006914!3.99e-10!25;UBERON:0003103!5.69e-10!69;UBERON:0005256!1.12e-09!143;UBERON:0001986!2.77e-09!18;UBERON:0004638!2.77e-09!18;UBERON:0004852!2.77e-09!18;UBERON:0002050!3.27e-09!605;UBERON:0005423!3.27e-09!605;UBERON:0000923!6.58e-09!604;UBERON:0005291!6.58e-09!604;UBERON:0006598!6.58e-09!604;UBERON:0002532!6.58e-09!604;UBERON:0000487!7.12e-09!22;UBERON:0001637!1.07e-08!42;UBERON:0003509!1.07e-08!42;UBERON:0004572!1.07e-08!42;UBERON:0003104!2.39e-08!238;UBERON:0009142!2.39e-08!238;UBERON:0000486!1.20e-07!82;UBERON:0004573!4.69e-07!33;UBERON:0004571!4.69e-07!33;UBERON:0000064!8.86e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.23e-10;25!UBERON:0004638;1.95e-09;18!UBERON:0001986;1.95e-09;18!UBERON:0004852;1.95e-09;18!UBERON:0000487;4.23e-09;22!UBERON:0007500;2.43e-08;56!UBERON:0001981;2.43e-08;56!UBERON:0004537;2.43e-08;56!UBERON:0000055;4.74e-08;65!UBERON:0000490;5.09e-08;33!UBERON:0001637;5.13e-07;42!UBERON:0003509;5.13e-07;42!UBERON:0004572;5.13e-07;42!UBERON:0004573;8.82e-07;33!UBERON:0004571;8.82e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.44e-17,83;UBERON:0000119,5.70e-17,309;UBERON:0000483,2.34e-16,306;UBERON:0002049,7.76e-16,78;UBERON:0007798,7.76e-16,78;UBERON:0000055,1.88e-15,68;UBERON:0004111,2.62e-15,240;UBERON:0007500,1.56e-14,59;UBERON:0001981,1.56e-14,59;UBERON:0004537,1.56e-14,59;UBERON:0006965,1.56e-14,59;UBERON:0003914,8.04e-14,117;UBERON:0001009,3.34e-11,112;UBERON:0004535,1.32e-10,109;UBERON:0000922,1.35e-10,592;UBERON:0003104,1.58e-10,160;UBERON:0009142,1.58e-10,160;UBERON:0000025,1.60e-10,192;UBERON:0006914,2.45e-10,25;UBERON:0003103,1.02e-09,68;UBERON:0000490,1.16e-09,148;UBERON:0004638,2.08e-09,18;UBERON:0001986,2.08e-09,18;UBERON:0004852,2.08e-09,18;UBERON:0000487,4.58e-09,22;UBERON:0001637,8.19e-09,42;UBERON:0003509,8.19e-09,42;UBERON:0004572,8.19e-09,42;UBERON:0002100,1.12e-08,199;UBERON:0005423,2.05e-08,581;UBERON:0005256,2.30e-08,122;UBERON:0002050,5.10e-08,564;UBERON:0000486,1.40e-07,83;UBERON:0007503,1.58e-07,78;UBERON:0000923,1.99e-07,560;UBERON:0010316,1.99e-07,560;UBERON:0005291,1.99e-07,560;UBERON:0006598,1.99e-07,560;UBERON:0010317,1.99e-07,560;UBERON:0002532,1.99e-07,560;UBERON:0004573,3.83e-07,33;UBERON:0004571,3.83e-07,33 | |||
|phase1_expression=6.17706489519893,5.78071414505655,4.93340414335899,7.00513088471913,6.25745532198203,6.97870819280295,7.59899634504932,3.79031924056099,16.4546945765898,6.38908234903923,18.8406315352555,7.20856528029568,13.4521158896511,8.04481294240303,9.94192127183747,8.74022690387308,8.43772339233568,10.9546513558106,9.27072317701963,16.1288586080592,11.4240387096782,16.6131002383387,10.304495536718,6.43309797842556,10.168953807179,0,0,0,0,0,0.154816123316076,6.43594857135249,34.6386806594988,6.65557218300218,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0.569212969109448,1.76171156811282,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,5.36560687762909,10.612592633013,9.03597880961416,11.0294340339896,7.09747942908036,2.3858578411533,8.75942766544745,2.6469748805939,3.76939975686359,5.00658278450818,10.478326039817,23.6791937390152,18.9100065820059,0,0,0,0.238490624305342,0,0,14.3108933304028,12.0432843314857,19.4398680900253,14.6980064900242,20.9749718104953,24.485505732666,25.7063808840277,16.2802558276677,12.4518191940349,27.447090246703,21.3499538067848,15.9657142200888,25.6265160425578,8.08858776760911,18.6332648012805,15.5381527214299,17.2887616922151,9.57197584108239,16.8648301212472,35.1228294040208,23.6330249670225,0,0,34.8875241714027,10.4364109856017,10.5103324681601,7.28250494472703,7.74458876021797,7.4480360261655,9.53151920241922,14.9448594021587,11.8400423240237,18.9838731593857,9.83387906108723,8.50001896189985,19.9791804491309,8.64263886719998,8.20125011418288,0.936480230490962,5.70471821544449,0.896692083310806,4.22764195117554,4.20869655357142,2.38766371393822,3.47062091133319,3.4393608847295,10.0226007740492,3.56400857184616,10.8797448882565,6.37112953356618,3.59309070908119,6.90178067211671,7.88246675193374,3.3247693858102,4.38977620880838,7.04921930337745,7.51190294532984,4.8775838758809,8.25192324168765,11.1049842185655,6.78182083710598,3.60109315301283,6.59536187126009,7.21393512127762,9.30584281657949,4.38818463827292,6.9180273664451,4.29137416214995,10.4016385465798,11.4768700341356,6.39017266529906,5.23910910783729,10.0040749463188,5.9910864480622,15.2737827530867,7.4569194801141,40.8611915534145,46.3854189125198,40.4354921185924,25.2932974237504,37.0911650787174,57.6664227339811,4.69348596989448,16.724264393015,11.0507937081984,6.03678306441573,2.16563844500876,0.828147600278907,0.168584690078102,0.482022059766964,0.772057809126758,0,0.237270619111097,0.269662616320329,0.784885860501384,0,26.5735963664873,22.4386838085513,16.0513864419246,14.7008711385542,5.07020139287323,3.9313088667105,8.86184860022106,0,12.2988438543114,5.66173773985134,8.67027254728142,7.86812272803337,5.12697759299317,29.6283024507295,5.86454949558584,1.03993478527958,0,12.1726925223831,9.97973901004484,11.4049493731248,6.94478268864916,14.0788072653603,3.95102198979638,5.15091697256924,0,0,0,4.68669169933885,9.57498130733499,9.92425680696705,4.47792613514241,4.35950907770943,22.6195780707475,0,4.0502279646084,4.76854665743776,3.747118788841,1.2624243342638,5.14332943766569,6.875791660049,4.68869788840188,13.6857956818164,3.70178973731965,3.00343057843917,12.862189468376,15.4740896396598,13.5147621338317,5.06034172164555,6.72212921940444,25.0359512096318,1.690605505112,16.2222251116771,8.32059495290929,3.85811061393213,4.25547396069835,2.66422179016099,3.43147184779554,2.71310802695722,7.40916303102692,1.30294473717494,3.19852753868291,1.58390374586686,3.61727252471503,2.61460037580088,9.19751518874925,0,0,0,5.99062138728957,19.5265290917994,2.85273810081437,1.59259437334337,2.26023954805422,2.50685348535854,0,0,0,0.128343036279748,7.6228387266739,3.90419561572865,2.31986643833309,1.67516265334349,1.27587750330633,0,0,0,14.3549045311394,13.0044335475516,8.95174578209127,29.3238914758438,16.4154669693389,19.397397049174,16.6340809289653,15.9501432855691,15.9185252839189,12.4167685551006,8.63493278096067,12.5371034608358,3.47534457872331,16.0556949119447,19.2160317334079,0,0,0,5.15316871458641,13.3148351608398,19.3529787730995,3.2254015016441,7.05925077125087,7.01650236082684,5.63812256725084,6.14048698880044,9.49038134747284,8.90508398669946,3.08419387605311,3.19611105563629,2.7101961484557,3.63478100428535,4.53220475993841,10.9982099128376,16.0405176242628,4.78821142466661,3.09999010044438,3.45973219212762,14.2925612305772,8.12159303233341,4.46688955205606,11.7652465376528,1.46139224653261,3.4832037534649,26.1586783363062,17.0093705276516,7.77297297967702,74.0290812913389,10.2959646266664,16.0540727633553,1.78413391131527,2.49322802678617,5.59686886805446,0,0,5.38545262744417,8.20036614249264,2.27764876265012,5.66725564062472,1.28197250745681,1.15513299888823,39.0500565837397,13.0012049207304,16.068392984416,14.1139248706498,2.92692372517824,3.53058451870098,4.27293374702045,3.6522883255213,6.38073453222605,3.74997160630844,12.0193248123095,6.11554186835619,11.5314040419064,32.1584035486352,6.77757131732185,5.57814659156743,6.61105928344344,9.7585217822484,8.3169066647544,10.1138145760234,9.5692629128258,9.266210955196,2.57624796135584,8.18748412591268,4.42931194606216,3.62197368455267,12.0271961916327,8.13084077264449,20.36500786726,15.6989728039846,7.73451567608253,6.86342574340137,5.06593330086452,11.1200364865324,6.34041284692033,8.00391066854064,10.727942259971,7.06769119930725,9.50851320810799,12.1484921153107,7.35308246159306,14.6910551606316,21.5032483982988,8.62470667813585,4.82295973779139,4.6302042741335,14.4296845450259,5.47858017799301,6.8161169581945,7.60578126837052,2.72481569187698,12.6741262906926,6.4200789266625,4.61189383291777,12.2442428472645,16.794039540955,4.55367808518858,9.44823744661454,9.71843338527672,12.73574323518,25.0449265181042,7.53150406214233,11.193139689452,8.42357378338128,10.6423236848802,11.486170010348,0,0,0,0,0,0,0,0,9.08004604583522,16.3621575394771,13.2321716629757,0,0,0,1.75368900001705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,17.7274896918992,3.51945513073589,0,16.7640326615784,1.19372242368845,9.50286978664444,1.22864280839693,1.9882952955326,3.37606599385231,3.22795244566427,0,14.1454023445756,30.8834381789158,7.18338180380984,0,2.35217969754956,0,4.66559381492711,0,0.358042349351218,0,17.3612393921003,0,12.2250689159101,6.78532922266653,2.31920245404628,3.99227596002388,1.5625665665114,1.66173999992772,27.5499838665222,0.796554137998498,0,0.236387681767936,0,0.583209226766509,2.43074992906609,5.31444831488303,6.0298219312704,4.5774520895125,5.30780447669878,4.72876190325676,2.19385397153973,0.10893846351899,10.3173570766166,28.8563469389239,1.48124672601102,5.53353370531344,11.040190262402,21.9467691282456,1.5950057986596,13.9228341970831,4.26427820814908,0,0,0,0,0,0,0,0.158936578980379,1.05499032264014,2.77495773870551,9.61200885750798,0.216388639742091,10.9478812418636,10.703365304904,18.9419344929424,1.18608451472249,2.22415090103705,1.56632924258183,7.07711896297109,22.4721741243661,1.63985112007737,0,5.28294471116642,4.85560759068186,13.8104540997287,14.5188859258397,0.91821828489147,24.5163928958533,0.450970258243478,1.24425829676697,3.98792323624311,3.30991955875499,2.82539626566503,4.77889719091835,0.569219092059585,0.277349346026277,6.59527005673497,11.7590876897253,22.5483345043243,11.531960103974,10.1471759158254,0,0,0,12.8995391929598,5.11885534810702,14.6887481507346,0,0,2.40581024632339,11.3419801986186,0.240476460754601,9.39193176853151,1.19885765749278,0.144090417154106,2.86341490414789,8.75134489096019,0,3.23056592470125,2.12124631155116,2.98989253361951,1.882851233622,3.46793939963494,0.288950589901519,5.4037825983881,6.98217432349165,0,3.43812353135966,0.525774708558629,11.7298608534347,13.749625440701,8.61447629492177,24.9598750623739,7.2968428183217,8.03417246790741,21.5658946682391,19.8164935948322,0,0.157566364614447,0.0824158583811665,0,1.87012214878023,0,4.77137813885582,6.81017030557878,44.3678689763453,51.9899070337544,43.6212354930644,2.0247650239635,3.0952078182318,2.73373004961111,1.67717343799633,5.51639951094387,35.1445740504487,0.844802692155252,0.179287339332845,9.02001427401393,14.2939065274673,5.29673576292345,13.221963958047,4.88699641578341,4.32110745600634,2.93928624098468,2.39460383124975,0.082092520749339,6.13396878427518,10.0847761452912,5.71553711344522,14.5757577803443,5.55916712354667,5.55376927319298,0.855434189421647,0,11.2126783196079,22.9518285445512,14.4983669371518,1.9846640872478,0,0,2.55336503108073,15.2324984943453,12.7851845951577,11.6411319170115,12.7870325976824,0.314108192500469,0,1.22026264901963,3.6305369904885,6.88091034828085,7.87596265911651,7.32737554708325,9.68440444553616,12.872982020097,0.151649117541648,4.85291067026445,2.82318983637806,0,0,0.597019211547496,3.27198633786114,2.77402930751307,1.51522404220071,4.0250864280412,2.66943366478961,2.97492088916001,4.99062048418689,4.97399041864897,4.28779934969938,9.55780602982214,2.24901556081802,7.14209601630793,2.07353103920428,5.58267600571789,4.17396049449387,8.56468371284145,5.71207818253193,2.44122439922797,6.36470307208958,6.01499119437935,5.10437135866343,8.75810955136955,8.80061082258938,9.27168403993541,9.09223619667982,15.1421877874381,6.93431389466292,6.86213092399762,1.04397716786085,8.61482516946635,3.24131464053368,3.42631386309055,2.50724377514082,19.4544911711412,1.31570429747224,9.89459217296934,3.66536672714738,1.68942440653073,1.53744911152768,4.14516410077438,2.73473960559644,3.17994403148981,0.389720617678777,0.930053882193542,0.327130788511688,4.58653788384978,0.491545817507439,0.211312123358627,0,0.213383459388282,0,2.27006381426734,0.920529751259204,3.49698769298611,6.22077260032973,0.127894371303652,0,5.34704202310048,0.54604819096007,3.22491806912648,10.2035961648808,1.61116493536703,12.8488331133846,21.6242958444325,0,0,21.8659085088224,7.34989145647681,3.27569047991944,1.41696576325585,3.35231104020018,2.05116364240755,2.52071696221718,2.83544735103293,3.71393984953257,0,1.07962490351128,3.30315225373673,5.31942935712869,5.4297063090659,3.05105676373734,2.7614397042404,4.57507310867432,19.6298956991561,5.44603685499504,2.34454203369928,1.57144016688853,0.818859587550484,0.295712172434091,2.97165372320936,2.34323429584154,4.34042272652487,2.98054307911362,5.4697480901822,2.19303106742873,18.3598136004039,5.62787981950786,13.5428173297971,2.14280734351315,2.01770233331294,3.03482802118316,3.41493287026946,3.99160665731875,0,0.342976018874837,3.46645638181842,2.30204707469972,1.89110145414349,2.55832224351759,13.893277434541,5.18481446722806,31.1102101278306,32.8737139383418,0,0.9555033757741,18.0835656766941,17.0654700671345,1.74362138052188,65.5445686580724,27.2581864008286,5.80205259656503,3.24365106478505,3.45629830907046,3.8720462293825,0,0,19.8991913589737,5.26945797651315,6.82454048461504,7.64431151181946,0.111855431797792,0,0,3.23714418593947,12.9355136638871,41.7533195281752,24.7712606460161,0,0.198950775161368,11.4163287146466,0.67767649223376,8.79524133963433,0.150962843566674,3.39566295674957,11.1465375857018,0,15.9346409140039,0,5.88925401344836,7.12911360785006,15.2156061930024,22.6003062534796,7.51871343838829,14.3741090181077,0,2.32120120187355,0.705789743431384,0,12.4157186001908,8.71585638468627,4.44352707769499,22.0880187070458,3.80752345069122,3.49080552272302,7.93540260773101,9.67187047233553,8.78133694399695,9.08515780459957,53.6207305549085,34.090858452673,21.7921421739672,8.87302818755241,30.1955667950083,5.329904173021,1.0028301571695,9.32077988084345,3.48353369203032,9.12086383404657,5.48194878068045,12.3675709502569,24.758700872229,1.80848947540817,6.6419944296568,4.03674705290208,13.8750805046399,25.6688829976938,8.05551967218757,12.6626321401554,5.32081218815241,8.82183126329919,25.947507810589,13.2687327835888,1.28072815053259,25.0993966973022,0.538951212639521,11.7320471201727,20.7810455110873,24.0068745206286,21.9699735481219,10.0636896795513,0 | |||
|short_description=p1@TCF7L1 | |||
}} |
Latest revision as of 15:47, 18 September 2015
Short description: | p1@TCF7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF7L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282111, NM_031283_5end |
EntrezGene: | TCF7L1 |
HGNC: | 11640 |
UniProt: | Q9HCS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.47e-18 | 250 |
mesodermal cell | 9.50e-14 | 121 |
endothelial cell | 1.91e-11 | 36 |
meso-epithelial cell | 2.30e-11 | 45 |
endothelial cell of vascular tree | 3.13e-11 | 24 |
lining cell | 5.44e-10 | 58 |
barrier cell | 5.44e-10 | 58 |
blood vessel endothelial cell | 2.08e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.08e-09 | 18 |