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FFCP PHASE1:Mm9::chr11:116059987..116059991,-: Difference between revisions

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{{FFCP|EntrezGene=11430|HGNC=|MCL_coexpression_id=111|UniProt=|association_with_transcript=51bp_to_ENSMUST00000124684_5end|description=CAGE_peak_4_at_Acox1_5end|id=chr11:116059987..116059991,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.69e-09!47;UBERON:0002107!1.59e-08!22;UBERON:0007499!1.59e-08!22;UBERON:0006925!1.59e-08!22;UBERON:0009497!1.59e-08!22;UBERON:0000015!1.59e-08!22;UBERON:0002423!1.59e-08!22;UBERON:0006235!1.59e-08!22;UBERON:0008835!1.59e-08!22;UBERON:0003894!1.59e-08!22;UBERON:0004161!1.59e-08!22;UBERON:0008836!1.59e-08!22;UBERON:0009854!9.76e-08!23;UBERON:0009856!9.76e-08!23;UBERON:0002365!2.60e-07!25;UBERON:0002330!2.60e-07!25;UBERON:0000025!5.64e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.03e-18,22;UBERON:0007499,1.03e-18,22;UBERON:0006925,1.03e-18,22;UBERON:0009497,1.03e-18,22;UBERON:0000015,1.03e-18,22;UBERON:0002423,1.03e-18,22;UBERON:0006235,1.03e-18,22;UBERON:0008835,1.03e-18,22;UBERON:0003894,1.03e-18,22;UBERON:0004161,1.03e-18,22;UBERON:0008836,1.03e-18,22;UBERON:0009854,1.01e-17,23;UBERON:0009856,1.01e-17,23;UBERON:0002365,5.67e-16,25;UBERON:0002330,5.67e-16,25;UBERON:0004119,3.21e-11,118;UBERON:0000925,3.21e-11,118;UBERON:0006595,3.21e-11,118;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0004921,4.41e-10,114;UBERON:0003914,5.11e-10,47;UBERON:0005256,2.86e-09,45;UBERON:0003929,4.87e-09,55;UBERON:0000344,1.70e-08,15;UBERON:0005172,3.38e-08,49;UBERON:0005173,3.38e-08,49;UBERON:0002417,3.38e-08,49;UBERON:0000916,3.38e-08,49;UBERON:0001242,5.10e-08,13;UBERON:0001262,5.10e-08,13;UBERON:0004786,5.10e-08,13;UBERON:0000490,1.28e-07,66;UBERON:0000160,2.56e-07,31;UBERON:0005409,2.86e-07,47|phase1_expression=0,2.79180326111489,2.72999543633722,2.41971369045464,0.500895729946347,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.799962113967033,1.37645568640302,0.57423196411502,2.58457197695445,1.939241094173,1.33016393619462,2.01624103807945,1.33038306393183,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.30559649555362,0,0.569486723196412,0.186399445825301,0.227178579999552,0.151143120213571,0.869593466105033,7.74381489283248,10.879541339324,5.39703191637817,9.74664626171504,12.0967259516281,1.26399978118577,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,7.19358442230078,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.452167921657868,1.05829836422134,0.376999773989026,0.494389935468748,2.16899035379867,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0.41889341362691,1.27728527604296,0,0,0,0.449371918214468,0.915001205637253,0.376963056338593,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0,0.497627882440372,0.758168275301024,4.41927897361595,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.710234206755631,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,1.61047702512446,1.26173969138476,0.411618449517138,3.96502539580558,3.70230793328962,0,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,2.84717436926707,0.658795818896044,0.754005626400808,0.397912944082302,0.779856348476481,0,1.29682829924817,1.7922714592893,0.189667900953082,0,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.470996183524124,1.97435462274881,9.19003143970162,0,0,0,0,0.72353147925725,0.50925170356284,1.43848068725405,14.2678999562031,2.19649130550465,10.0637744569148,7.44281895337007,2.18426371180192,2.27320990152401,6.27890947326693,10.6137574699941,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.160550589987792,1.05490517932983,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,1.48282449604674,0,0.65954501176592,0.645857706783622,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.556275906031529,0.170870880797853,0,0,0,0.136694227721025,0,0.509935289981566,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,1.21377911746339,1.81837602595739,1.30877970992015,1.68499465279331,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0,0,0,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0.0846146078916765,0,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0|short_description=p4@Acox1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11430
|HGNC=
|MCL_coexpression_id=111
|TSSclassifier=NA
|UniProt=
|association_with_transcript=51bp_to_ENSMUST00000124684_5end
|cluster_id=chr11:116059987..116059991,-
|description=CAGE_peak_4_at_Acox1_5end
|id=chr11:116059987..116059991,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.69e-09!47;UBERON:0002107!1.59e-08!22;UBERON:0007499!1.59e-08!22;UBERON:0006925!1.59e-08!22;UBERON:0009497!1.59e-08!22;UBERON:0000015!1.59e-08!22;UBERON:0002423!1.59e-08!22;UBERON:0006235!1.59e-08!22;UBERON:0008835!1.59e-08!22;UBERON:0003894!1.59e-08!22;UBERON:0004161!1.59e-08!22;UBERON:0008836!1.59e-08!22;UBERON:0009854!9.76e-08!23;UBERON:0009856!9.76e-08!23;UBERON:0002365!2.60e-07!25;UBERON:0002330!2.60e-07!25;UBERON:0000025!5.64e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.03e-18,22;UBERON:0007499,1.03e-18,22;UBERON:0006925,1.03e-18,22;UBERON:0009497,1.03e-18,22;UBERON:0000015,1.03e-18,22;UBERON:0002423,1.03e-18,22;UBERON:0006235,1.03e-18,22;UBERON:0008835,1.03e-18,22;UBERON:0003894,1.03e-18,22;UBERON:0004161,1.03e-18,22;UBERON:0008836,1.03e-18,22;UBERON:0009854,1.01e-17,23;UBERON:0009856,1.01e-17,23;UBERON:0002365,5.67e-16,25;UBERON:0002330,5.67e-16,25;UBERON:0004119,3.21e-11,118;UBERON:0000925,3.21e-11,118;UBERON:0006595,3.21e-11,118;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0004921,4.41e-10,114;UBERON:0003914,5.11e-10,47;UBERON:0005256,2.86e-09,45;UBERON:0003929,4.87e-09,55;UBERON:0000344,1.70e-08,15;UBERON:0005172,3.38e-08,49;UBERON:0005173,3.38e-08,49;UBERON:0002417,3.38e-08,49;UBERON:0000916,3.38e-08,49;UBERON:0001242,5.10e-08,13;UBERON:0001262,5.10e-08,13;UBERON:0004786,5.10e-08,13;UBERON:0000490,1.28e-07,66;UBERON:0000160,2.56e-07,31;UBERON:0005409,2.86e-07,47
|phase1_expression=0,2.79180326111489,2.72999543633722,2.41971369045464,0.500895729946347,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.799962113967033,1.37645568640302,0.57423196411502,2.58457197695445,1.939241094173,1.33016393619462,2.01624103807945,1.33038306393183,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.30559649555362,0,0.569486723196412,0.186399445825301,0.227178579999552,0.151143120213571,0.869593466105033,7.74381489283248,10.879541339324,5.39703191637817,9.74664626171504,12.0967259516281,1.26399978118577,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,7.19358442230078,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.452167921657868,1.05829836422134,0.376999773989026,0.494389935468748,2.16899035379867,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0.41889341362691,1.27728527604296,0,0,0,0.449371918214468,0.915001205637253,0.376963056338593,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0,0.497627882440372,0.758168275301024,4.41927897361595,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.710234206755631,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,1.61047702512446,1.26173969138476,0.411618449517138,3.96502539580558,3.70230793328962,0,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,2.84717436926707,0.658795818896044,0.754005626400808,0.397912944082302,0.779856348476481,0,1.29682829924817,1.7922714592893,0.189667900953082,0,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.470996183524124,1.97435462274881,9.19003143970162,0,0,0,0,0.72353147925725,0.50925170356284,1.43848068725405,14.2678999562031,2.19649130550465,10.0637744569148,7.44281895337007,2.18426371180192,2.27320990152401,6.27890947326693,10.6137574699941,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.160550589987792,1.05490517932983,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,1.48282449604674,0,0.65954501176592,0.645857706783622,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.556275906031529,0.170870880797853,0,0,0,0.136694227721025,0,0.509935289981566,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,1.21377911746339,1.81837602595739,1.30877970992015,1.68499465279331,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0,0,0,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0.0846146078916765,0,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0
|short_description=p4@Acox1
}}

Latest revision as of 00:06, 27 September 2015

Short description:p4@Acox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Acox1_5end
Coexpression cluster:MCL_coexpression_mm9:111
Association with transcript: 51bp_to_ENSMUST00000124684_5end
EntrezGene:Acox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Acox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F414.27
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.85e-075

Uber anatomy
Ontology termp-valuen
liver1.03e-1822
epithelial sac1.03e-1822
digestive gland1.03e-1822
epithelium of foregut-midgut junction1.03e-1822
anatomical boundary1.03e-1822
hepatobiliary system1.03e-1822
foregut-midgut junction1.03e-1822
hepatic diverticulum1.03e-1822
liver primordium1.03e-1822
septum transversum1.03e-1822
liver bud1.03e-1822
digestive tract diverticulum1.01e-1723
sac1.01e-1723
exocrine gland5.67e-1625
exocrine system5.67e-1625
endoderm-derived structure3.21e-11118
endoderm3.21e-11118
presumptive endoderm3.21e-11118
digestive system1.22e-10116
digestive tract1.22e-10116
primitive gut1.22e-10116
subdivision of digestive tract4.41e-10114
epithelial tube5.11e-1047
trunk mesenchyme2.86e-0945
gut epithelium4.87e-0955
mucosa1.70e-0815
abdomen element3.38e-0849
abdominal segment element3.38e-0849
abdominal segment of trunk3.38e-0849
abdomen3.38e-0849
intestinal mucosa5.10e-0813
wall of intestine5.10e-0813
gastrointestinal system mucosa5.10e-0813
unilaminar epithelium1.28e-0766
intestine2.56e-0731
gastrointestinal system2.86e-0747
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