FFCP PHASE1:Hg19::chr2:31560793..31560814,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:31560793..31560814,- | |||
|coexpression_cluster_id=C4221 | |||
|description=CAGE_peak_at_chr2:31560793..31560814,- | |||
|id=chr2:31560793..31560814,- | |||
|ontology_enrichment_celltype=CL:0002076!9.99e-16!43;CL:0000066!8.75e-13!254;CL:0000244!3.26e-11!4;CL:0000731!3.26e-11!4;CL:0002251!1.10e-10!21;CL:0000223!4.72e-10!59;CL:0002159!1.11e-08!13;CL:0002166!1.29e-08!3;CL:0000076!1.17e-07!62;CL:0000548!2.81e-07!679;CL:0000004!2.81e-07!679;CL:0000255!2.81e-07!679;CL:0000012!3.73e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.07e-50;4!CL:0000731;1.07e-50;4!CL:0002166;1.33e-17;3!CL:0000313;1.51e-13;1!CL:0002159;1.49e-08;14!CL:0002535;9.25e-08;2!CL:0000159;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.21e-50,4;CL:0000731,1.21e-50,4;CL:0002166,1.18e-17,3;CL:0000313,1.83e-13,1;CL:0000066,2.56e-09,253;CL:0002159,1.42e-08,14;CL:0002535,9.25e-08,2;CL:0000159,2.25e-07,2;CL:0000076,8.95e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.54e-18!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.29e-14;14!DOID:2152;1.51e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.32e-14,14;DOID:2152,1.83e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0005910!4.18e-15!6;UBERON:0000365!4.24e-13!5;UBERON:0003102!7.23e-12!95;UBERON:0003729!1.25e-10!5;UBERON:0003343!4.70e-09!4;UBERON:0004785!4.70e-09!4;UBERON:0000165!9.14e-09!28;UBERON:0000930!9.14e-09!28;UBERON:0000166!4.14e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.16e-40;5!UBERON:0005910;5.79e-34;6!UBERON:0000486;3.59e-17;12!UBERON:0004911;1.51e-13;1!UBERON:0001708;1.89e-13;4!UBERON:0008895;1.89e-13;4!UBERON:0011159;6.00e-11;5!UBERON:0006955;9.25e-08;2!UBERON:0004801;9.25e-08;2!UBERON:0004909;2.05e-07;2!UBERON:0006554;5.31e-07;30!UBERON:0001008;5.31e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.29e-40,5;UBERON:0005910,6.31e-34,6;UBERON:0001708,1.72e-13,4;UBERON:0008895,1.72e-13,4;UBERON:0004911,1.83e-13,1;UBERON:0011159,5.57e-11,5;UBERON:0010188,2.66e-09,6;UBERON:0002539,2.66e-09,6;UBERON:0008816,2.66e-09,6;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0004909,2.25e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.51973192298289,0.708875486211932,3.85101647622248,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.00253235151642,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.384888450902048,0,0,0,5.16606447205476,3.36942951335251,3.10401107475673,4.13502120372527,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,10.0118087567463,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07064315711112,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,1.76689145945881,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0.170426809518315,0,0.22910686854405,0,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:31560793..31560814,- | |||
}} |
Latest revision as of 09:36, 29 July 2015
Short description: | p@chr2:31560793..31560814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:31560793..31560814, - |
Coexpression cluster: | C4221_epidermoid_large_Urothelial_Mammary_squamous_Mallassezderived_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.21e-50 | 4 |
urothelial cell | 1.21e-50 | 4 |
epithelial cell of Malassez | 1.18e-17 | 3 |
serous secreting cell | 1.83e-13 | 1 |
epithelial cell | 2.56e-09 | 253 |
general ecto-epithelial cell | 1.42e-08 | 14 |
epithelial cell of cervix | 9.25e-08 | 2 |
seromucus secreting cell | 2.25e-07 | 2 |
squamous epithelial cell | 8.95e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.29e-40 | 5 |
transitional epithelium | 6.31e-34 | 6 |
jaw skeleton | 1.72e-13 | 4 |
splanchnocranium | 1.72e-13 | 4 |
epithelium of female gonad | 1.83e-13 | 1 |
primary subdivision of cranial skeletal system | 5.57e-11 | 5 |
protuberance | 2.66e-09 | 6 |
pharyngeal arch | 2.66e-09 | 6 |
embryonic head | 2.66e-09 | 6 |
uterine epithelium | 9.25e-08 | 2 |
cervix epithelium | 9.25e-08 | 2 |
epithelium of gonad | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.32e-14 | 14 |
ovary epithelial cancer | 1.83e-13 | 1 |