FFCP PHASE1:Hg19::chr2:242211359..242211388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4857 | |||
|TSSclassifier=strong | |||
|UniProt=C9JES8 | |||
|association_with_transcript=0bp_to_ENST00000444092_5end | |||
|cluster_id=chr2:242211359..242211388,- | |||
|description=CAGE_peak_5_at_HDLBP_5end | |||
|id=chr2:242211359..242211388,- | |||
|ontology_enrichment_celltype=CL:0000055!6.66e-22!180;CL:0000680!3.43e-16!57;CL:0000056!3.43e-16!57;CL:0000355!3.43e-16!57;CL:0000187!6.50e-15!54;CL:0000192!1.24e-14!42;CL:0000514!1.24e-14!42;CL:0000359!5.16e-14!32;CL:0000057!1.12e-13!75;CL:0000183!1.52e-13!59;CL:0000393!2.18e-10!60;CL:0000211!2.18e-10!60;CL:0000222!5.69e-10!119;CL:0000048!1.50e-08!430;CL:0000723!1.38e-07!436;CL:0000548!4.71e-07!679;CL:0000004!4.71e-07!679;CL:0000255!4.71e-07!679;CL:0002334!5.01e-07!12;CL:0002371!6.83e-07!591;CL:0000012!9.33e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.47e-13;32!CL:0000192;1.35e-10;43!CL:0000134;1.37e-08;55!CL:0000187;1.63e-08;55!CL:0000048;1.37e-07;58!CL:0000723;1.60e-07;61!CL:0002334;2.92e-07;12!CL:0002494;9.14e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.74e-17,58;CL:0000056,7.74e-17,58;CL:0000355,7.74e-17,58;CL:0000187,1.61e-15,55;CL:0000192,5.30e-15,43;CL:0000514,5.30e-15,43;CL:0000359,2.07e-14,32;CL:0000057,2.80e-14,76;CL:0000393,2.75e-11,61;CL:0000211,2.75e-11,61;CL:0000048,3.85e-10,427;CL:0000222,2.55e-09,121;CL:0000723,3.14e-09,433;CL:0000034,5.99e-08,441;CL:0002334,3.35e-07,12;CL:0002494,9.71e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.35e-10;43!CL:0000355;1.32e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.95e-18!83;UBERON:0002329!1.95e-18!83;UBERON:0003077!1.95e-18!83;UBERON:0003059!1.95e-18!83;UBERON:0007282!1.95e-18!83;UBERON:0009618!1.95e-18!83;UBERON:0007285!1.95e-18!83;UBERON:0002100!3.64e-18!216;UBERON:0004290!1.65e-16!70;UBERON:0005256!2.06e-16!143;UBERON:0003104!3.16e-16!238;UBERON:0009142!3.16e-16!238;UBERON:0000926!2.07e-15!448;UBERON:0004120!2.07e-15!448;UBERON:0006603!2.07e-15!448;UBERON:0001134!2.98e-15!61;UBERON:0002036!2.98e-15!61;UBERON:0003082!2.98e-15!61;UBERON:0002385!1.14e-14!63;UBERON:0001015!1.14e-14!63;UBERON:0000383!1.14e-14!63;UBERON:0004872!1.19e-13!84;UBERON:0000490!3.92e-13!138;UBERON:0000486!5.31e-13!82;UBERON:0003914!3.00e-11!118;UBERON:0001637!3.61e-11!42;UBERON:0003509!3.61e-11!42;UBERON:0004572!3.61e-11!42;UBERON:0002049!1.99e-10!79;UBERON:0007798!1.99e-10!79;UBERON:0004573!1.13e-09!33;UBERON:0004571!1.13e-09!33;UBERON:0000475!1.41e-09!365;UBERON:0001981!2.19e-09!60;UBERON:0007500!2.19e-09!60;UBERON:0004537!2.19e-09!60;UBERON:0006965!2.19e-09!60;UBERON:0000055!5.90e-09!69;UBERON:0004535!1.04e-08!110;UBERON:0001009!1.42e-08!113;UBERON:0000481!1.55e-08!347;UBERON:0003102!3.02e-08!95;UBERON:0000468!7.28e-07!659;UBERON:0001013!9.03e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.55e-08;33!UBERON:0004571;1.55e-08;33!UBERON:0001637;7.85e-08;42!UBERON:0003509;7.85e-08;42!UBERON:0004572;7.85e-08;42!UBERON:0001013;6.58e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.47e-18,122;UBERON:0002329,5.57e-17,71;UBERON:0003059,5.57e-17,71;UBERON:0007282,5.57e-17,71;UBERON:0004290,5.57e-17,71;UBERON:0009618,5.57e-17,71;UBERON:0007524,9.70e-17,73;UBERON:0003077,2.94e-16,72;UBERON:0007285,2.94e-16,72;UBERON:0002100,8.32e-16,199;UBERON:0001134,1.12e-15,62;UBERON:0002036,1.12e-15,62;UBERON:0003082,1.12e-15,62;UBERON:0002385,4.39e-15,64;UBERON:0001015,4.39e-15,64;UBERON:0000383,4.39e-15,64;UBERON:0007503,9.01e-15,78;UBERON:0000490,1.90e-14,148;UBERON:0003104,2.10e-14,160;UBERON:0009142,2.10e-14,160;UBERON:0004872,2.31e-13,83;UBERON:0000486,2.42e-13,83;UBERON:0001637,1.79e-11,42;UBERON:0003509,1.79e-11,42;UBERON:0004572,1.79e-11,42;UBERON:0003914,1.40e-10,117;UBERON:0002049,4.17e-10,78;UBERON:0007798,4.17e-10,78;UBERON:0004573,6.22e-10,33;UBERON:0004571,6.22e-10,33;UBERON:0003102,1.95e-09,99;UBERON:0000926,5.02e-09,315;UBERON:0004120,5.02e-09,315;UBERON:0006603,5.02e-09,315;UBERON:0007500,5.28e-09,59;UBERON:0001981,5.28e-09,59;UBERON:0004537,5.28e-09,59;UBERON:0006965,5.28e-09,59;UBERON:0000055,1.33e-08,68;UBERON:0004535,3.49e-08,109;UBERON:0001009,4.65e-08,112;UBERON:0001013,6.15e-07,14;UBERON:0004923,8.43e-07,66 | |||
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| |||
|short_description=p5@HDLBP | |||
}} |
Latest revision as of 10:05, 16 September 2015
Short description: | p5@HDLBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HDLBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444092_5end |
EntrezGene: | HDLBP |
HGNC: | 4857 |
UniProt: | C9JES8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.74e-17 | 58 |
myoblast | 7.74e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.74e-17 | 58 |
muscle cell | 1.61e-15 | 55 |
smooth muscle cell | 5.30e-15 | 43 |
smooth muscle myoblast | 5.30e-15 | 43 |
vascular associated smooth muscle cell | 2.07e-14 | 32 |
fibroblast | 2.80e-14 | 76 |
electrically responsive cell | 2.75e-11 | 61 |
electrically active cell | 2.75e-11 | 61 |
multi fate stem cell | 3.85e-10 | 427 |
mesodermal cell | 2.55e-09 | 121 |
somatic stem cell | 3.14e-09 | 433 |
stem cell | 5.99e-08 | 441 |
preadipocyte | 3.35e-07 | 12 |
cardiocyte | 9.71e-07 | 16 |