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FFCP PHASE1:Mm9::chr10:82321943..82321962,+: Difference between revisions

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{{FFCP|EntrezGene=50493|HGNC=|MCL_coexpression_id=24|UniProt=Q9JMH6|association_with_transcript=0bp_to_ENSMUST00000020484,ENSMUST00000166077,NM_001042513,NM_015762,uc007gjz.1,uc007gka.1_5end|description=CAGE_peak_1_at_Txnrd1_5end|id=chr10:82321943..82321962,+|ontology_enrichment_celltype=CL:0000144!2.07e-17!121;CL:0000012!2.07e-17!121;CL:0002371!3.98e-16!118;CL:0000548!1.29e-15!115;CL:0000004!1.29e-15!115;CL:0000255!1.29e-15!115;CL:0002321!7.74e-15!70;CL:0000220!7.74e-15!70;CL:0000066!2.70e-12!25;CL:0000223!4.78e-11!20;CL:0002076!5.10e-09!15;CL:0000034!2.19e-08!97;CL:0000063!1.05e-07!66|ontology_enrichment_celltype_v019_2=CL:0002321,7.74e-15,70;CL:0000066,2.70e-12,25;CL:0000223,4.78e-11,20;CL:0002076,5.10e-09,15;CL:0000034,2.19e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.44e-09!15;UBERON:0001242!2.44e-08!13;UBERON:0000060!2.44e-08!13;UBERON:0001262!2.44e-08!13;UBERON:0004786!2.44e-08!13;UBERON:0000160!1.68e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-11,31;UBERON:0000344,1.44e-09,15;UBERON:0005409,1.02e-08,47;UBERON:0001242,2.44e-08,13;UBERON:0001262,2.44e-08,13;UBERON:0004786,2.44e-08,13;UBERON:0001007,4.28e-07,116;UBERON:0001555,4.28e-07,116;UBERON:0007026,4.28e-07,116;UBERON:0004119,6.58e-07,118;UBERON:0000925,6.58e-07,118;UBERON:0006595,6.58e-07,118|phase1_expression=30.5884297970156,303.259629238605,286.649520815408,376.567943077003,420.251517424985,114.325784171997,155.819631277216,8.13476937681931,66.4522768555867,44.7063245275008,32.3601959946204,42.438788585519,11.4704489053908,8.21751782738576,26.9818907070687,28.9539632367451,30.7807226376385,12.3030244489713,11.1062691220648,9.33657233955666,34.18740264073,37.1348157491311,22.9855814442263,187.511119513873,168.386412303303,246.345512605344,181.78156237913,196.078821744159,181.662389000293,143.657173963161,174.28018137507,41.9120244483357,39.9792111929971,79.2408405077194,62.9696531057779,63.8341038176611,48.5923067904438,35.9937202433741,39.06676722619,48.6877081895632,71.7642415397837,44.397956522299,41.2683800076481,148.432348393206,143.955242331711,147.571588737992,13.3006528539167,65.8435972268948,49.8687634807251,59.4955491167307,64.5337403692921,40.250718022192,11.2414346058683,19.5847778343063,16.8046899571232,121.169194372931,39.8281481514872,55.6925859659638,34.5961148069912,33.3264316941381,29.7900759647904,36.5952094634663,32.014612660001,54.4439328955246,48.4544517657817,41.2078466668738,47.6364175724264,40.3429220587632,52.6743230527066,76.4133610957369,66.4626877870367,18.852964970651,19.436431603742,53.5284792569349,72.6508670318232,47.7993769037211,34.1359231098105,22.0899094887375,29.4924543851987,35.7411839748825,46.2012600192169,30.7338888628488,30.7101298901519,27.0126052815206,24.7533161398432,21.2132581541041,21.4981238006645,35.4158947068071,195.222126412948,114.113055761246,76.2343605285413,60.229671388697,238.66993813142,98.2259808780827,62.3785360749762,60.9316566452376,86.2328739608956,73.796329676299,68.5835052151574,55.4743131981234,29.4362747333262,98.8113876090247,142.690934235722,227.541345009066,107.163065300551,111.731700674518,104.138035673045,89.2917939403049,29.0010429684832,23.750742250372,25.1553723810897,23.4438418300349,36.6678640637133,29.0894696266562,27.3981687626192,30.9139814671002,26.449861547578,31.9564578793005,20.3460426948471,22.4855921426899,24.2925670306433,26.6681389224372,78.2845397116113,14.0534782565543,10.8912287542997,105.24830674594,39.2993608379418,40.7933857075517,38.3752085760655,15.4284358586967,25.1625331550245,28.6491922817331,15.1227158567281,16.1100738118108,19.7398642331582,18.1710214635889,25.6635196902797,31.8481844761838,28.5576717030052,41.8779293214083,34.6120378280792,28.5078609497506,23.2280147448901,24.2634756715501,23.1324097114515,22.163673609279,20.8954845768195,25.6116337031625,36.6465587985832,24.5837904218165,21.2900860238378,18.8508329887714,20.5754964426942,30.2979384874285,32.1020132796392,22.0928036168527,41.4305780514809,30.1097051324217,32.3946389310976,23.8194638415827,25.5633405379395,27.0093092191522,22.0172604094246,24.3987647366781,21.2888615784582,21.1605889722871,26.2907933371627,21.7183536802935,21.5573403386659,20.1925980817287,21.5643033391976,23.8305979503292,34.2498179854039,35.4304945527381,12.8276868624118,26.9610084433725,274.90842744252,196.486771031013,30.2869315760032,26.9394539358109,36.4694915541524,31.8659968904881,29.5762798313678,37.093997091949,140.460602217175,57.8093331081278,45.2403375840485,39.7912944082302,43.0870632533256,134.822911298133,136.383109470932,132.2298054409,27.1225098362907,31.189843942456,23.6686244913469,28.1038832426534,30.6444929724849,33.8054651871335,34.400676195596,62.2914824473921,56.9905382064191,70.3363834354263,92.7896722782776,36.2053879403924,43.4395379200179,36.4276622063463,32.254759300772,34.0059795250908,24.4440817710163,22.727994858614,26.4280419643308,46.4008788287858,58.9449646762154,46.1454775108944,50.55010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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=50493
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q9JMH6
|association_with_transcript=0bp_to_ENSMUST00000020484,ENSMUST00000166077,NM_001042513,NM_015762,uc007gjz.1,uc007gka.1_5end
|cluster_id=chr10:82321943..82321962,+
|description=CAGE_peak_1_at_Txnrd1_5end
|id=chr10:82321943..82321962,+
|ontology_enrichment_celltype=CL:0000144!2.07e-17!121;CL:0000012!2.07e-17!121;CL:0002371!3.98e-16!118;CL:0000548!1.29e-15!115;CL:0000004!1.29e-15!115;CL:0000255!1.29e-15!115;CL:0002321!7.74e-15!70;CL:0000220!7.74e-15!70;CL:0000066!2.70e-12!25;CL:0000223!4.78e-11!20;CL:0002076!5.10e-09!15;CL:0000034!2.19e-08!97;CL:0000063!1.05e-07!66
|ontology_enrichment_celltype_v019_2=CL:0002321,7.74e-15,70;CL:0000066,2.70e-12,25;CL:0000223,4.78e-11,20;CL:0002076,5.10e-09,15;CL:0000034,2.19e-08,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.44e-09!15;UBERON:0001242!2.44e-08!13;UBERON:0000060!2.44e-08!13;UBERON:0001262!2.44e-08!13;UBERON:0004786!2.44e-08!13;UBERON:0000160!1.68e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-11,31;UBERON:0000344,1.44e-09,15;UBERON:0005409,1.02e-08,47;UBERON:0001242,2.44e-08,13;UBERON:0001262,2.44e-08,13;UBERON:0004786,2.44e-08,13;UBERON:0001007,4.28e-07,116;UBERON:0001555,4.28e-07,116;UBERON:0007026,4.28e-07,116;UBERON:0004119,6.58e-07,118;UBERON:0000925,6.58e-07,118;UBERON:0006595,6.58e-07,118
|phase1_expression=30.5884297970156,303.259629238605,286.649520815408,376.567943077003,420.251517424985,114.325784171997,155.819631277216,8.13476937681931,66.4522768555867,44.7063245275008,32.3601959946204,42.438788585519,11.4704489053908,8.21751782738576,26.9818907070687,28.9539632367451,30.7807226376385,12.3030244489713,11.1062691220648,9.33657233955666,34.18740264073,37.1348157491311,22.9855814442263,187.511119513873,168.386412303303,246.345512605344,181.78156237913,196.078821744159,181.662389000293,143.657173963161,174.28018137507,41.9120244483357,39.9792111929971,79.2408405077194,62.9696531057779,63.8341038176611,48.5923067904438,35.9937202433741,39.06676722619,48.6877081895632,71.7642415397837,44.397956522299,41.2683800076481,148.432348393206,143.955242331711,147.571588737992,13.3006528539167,65.8435972268948,49.8687634807251,59.4955491167307,64.5337403692921,40.250718022192,11.2414346058683,19.5847778343063,16.8046899571232,121.169194372931,39.8281481514872,55.6925859659638,34.5961148069912,33.3264316941381,29.7900759647904,36.5952094634663,32.014612660001,54.4439328955246,48.4544517657817,41.2078466668738,47.6364175724264,40.3429220587632,52.6743230527066,76.4133610957369,66.4626877870367,18.852964970651,19.436431603742,53.5284792569349,72.6508670318232,47.7993769037211,34.1359231098105,22.0899094887375,29.4924543851987,35.7411839748825,46.2012600192169,30.7338888628488,30.7101298901519,27.0126052815206,24.7533161398432,21.2132581541041,21.4981238006645,35.4158947068071,195.222126412948,114.113055761246,76.2343605285413,60.229671388697,238.66993813142,98.2259808780827,62.3785360749762,60.9316566452376,86.2328739608956,73.796329676299,68.5835052151574,55.4743131981234,29.4362747333262,98.8113876090247,142.690934235722,227.541345009066,107.163065300551,111.731700674518,104.138035673045,89.2917939403049,29.0010429684832,23.750742250372,25.1553723810897,23.4438418300349,36.6678640637133,29.0894696266562,27.3981687626192,30.9139814671002,26.449861547578,31.9564578793005,20.3460426948471,22.4855921426899,24.2925670306433,26.6681389224372,78.2845397116113,14.0534782565543,10.8912287542997,105.24830674594,39.2993608379418,40.7933857075517,38.3752085760655,15.4284358586967,25.1625331550245,28.6491922817331,15.1227158567281,16.1100738118108,19.7398642331582,18.1710214635889,25.6635196902797,31.8481844761838,28.5576717030052,41.8779293214083,34.6120378280792,28.5078609497506,23.2280147448901,24.2634756715501,23.1324097114515,22.163673609279,20.8954845768195,25.6116337031625,36.6465587985832,24.5837904218165,21.2900860238378,18.8508329887714,20.5754964426942,30.2979384874285,32.1020132796392,22.0928036168527,41.4305780514809,30.1097051324217,32.3946389310976,23.8194638415827,25.5633405379395,27.0093092191522,22.0172604094246,24.3987647366781,21.2888615784582,21.1605889722871,26.2907933371627,21.7183536802935,21.5573403386659,20.1925980817287,21.5643033391976,23.8305979503292,34.2498179854039,35.4304945527381,12.8276868624118,26.9610084433725,274.90842744252,196.486771031013,30.2869315760032,26.9394539358109,36.4694915541524,31.8659968904881,29.5762798313678,37.093997091949,140.460602217175,57.8093331081278,45.2403375840485,39.7912944082302,43.0870632533256,134.822911298133,136.383109470932,132.2298054409,27.1225098362907,31.189843942456,23.6686244913469,28.1038832426534,30.6444929724849,33.8054651871335,34.400676195596,62.2914824473921,56.9905382064191,70.3363834354263,92.7896722782776,36.2053879403924,43.4395379200179,36.4276622063463,32.254759300772,34.0059795250908,24.4440817710163,22.727994858614,26.4280419643308,46.4008788287858,58.9449646762154,46.1454775108944,50.5501030445588,68.9540336795615,96.8746033018326,88.7696079308596,27.3434721446575,27.2867632949498,26.7262561364922,34.6279974981384,29.3362810360628,18.7607008334834,14.9967493758189,22.4403695036469,27.4285150744772,30.3406624818822,21.6858485374182,24.7433605220764,34.709681355045,34.2818268838182,40.7136466636035,52.2149456465961,75.7316980449316,28.9733583619969,18.9449696185595,22.0357970793342,170.820213082496,43.6774704063565,90.8663671918819,90.1913499325235,46.7468773080174,75.2751713550539,57.4820579132577,55.4830000346112,82.9861938433533,72.187196904094,68.3847855847486,14.7807805554031,19.3038515883245,17.8065603667255,20.8495307972577,29.5296520120838,18.5843193675948,39.573243693262,38.0927681775586,28.1021568836288,23.6241514304618,22.7502009478506,41.3485269069154,24.7202936044704,20.6768479463138,21.4904995396355,20.0295356292498,34.0347292719017,21.7881347682424,27.7294084808218,21.2148241403717,16.7182887324642,12.7684968222437,18.7287258482174,15.9612549984057,11.2652031172402,38.2514884143848,19.9122146611991,15.2164594657924,56.5559847589277,39.0743912604091,49.155033816447,52.1657143293706,52.5250879184196,97.9375611076298,18.913380805072,17.5997007221788,31.7835776663363,26.2976228864991,23.7344255825911,23.9214898511794,22.6490391474457,83.2894306969891,72.3549008513312,76.1481855662375,59.189578316937,25.4650474832814,26.2282112593635,28.7294206585991,27.1814784818809,25.766782522049,45.4492847316846,39.5910052924359,70.935860277672,96.3039251558021,21.7468759580424,2.25477175473676,24.8197466433005,20.5168528166801,18.6673140810286,23.7654075199025,16.726656423587,16.4300134104056,22.6555629628473,14.2608708418967,9.90494895386625,10.3690802252832,16.1165671520371,31.2196831546853,28.3482241774923,28.4526602321371,17.9026695667481,15.2984643181574,21.0342036659945,20.5288442772662,20.6981222393703,20.804458216815,19.0561489908629,16.8602133679772,18.7613091198642,13.6745975552436,39.9045475162772,116.098653614636,122.369700415325,116.847692989399,23.7623200659594,24.0233568577513,56.9601551471194,15.4345232936927,11.034586288778,10.1655331671072,8.74617949363636,11.4579102687879,14.0919609521824,9.59115527678899,10.5755145634558,9.45031500324528,12.6089936902782,8.60970577069989,6.21312374102184,48.2611166266421,11.1726964552289,22.7075695652998,21.1502843849416,26.4112584911258,26.657308725252,20.8911924133518,21.2216108956061,17.9714757371417,15.6672271293554,21.5457404906704,16.5991180419747,22.0057542554224,24.9057842854941,23.9505905544907,20.0043350338891,27.9281225527102,27.7789277467735,19.3680373377554,17.9582682563965,23.3151091622082,22.0069999637578,26.9432894640473,23.4007730778049,26.5388452771232,25.0459239359362,25.6099162021882,19.2040889349625,25.6669775168679,21.3234063229941,22.3033834073447,27.1872371356555,17.5969348562966,27.113947207544,26.8140189263787,21.7335202806013,23.3931608445408,24.495300161506,18.9375448748155,15.0002165001271,14.6076736440866
|short_description=p1@Txnrd1
}}

Latest revision as of 11:46, 26 September 2015

Short description:p1@Txnrd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Txnrd1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000020484, ENSMUST00000166077, NM_001042513, NM_015762, uc007gjz.1, uc007gka.1_5end
EntrezGene:Txnrd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Txnrd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G730.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5303.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6286.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I3376.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I4420.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7114.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8155.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E766.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A328.95
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H237.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1187.51
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2168.39
GP2+ M cell, pool1.CNhs13228.11845-124H9246.35
GP2+ M cell, pool2.CNhs13231.11846-124I1181.78
GP2+ M cell, pool3.CNhs13240.11847-124I2196.08
Ileum epithelium, pool1.CNhs13199.10252-104B9181.66
Ileum epithelium, pool2.CNhs13232.10253-104C1143.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8174.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I341.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G639.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F562.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F663.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F748.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G971.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H244.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H441.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8148.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9143.96
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3147.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C265.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B849.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C359.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C464.53
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1121.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E139.83
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C555.69
Mouse Granule cells, donor1.CNhs12131.11713-123C334.60
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C754.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C847.64
Mouse Microglia, donor2.CNhs12634.11736-123E840.34
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D552.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F576.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D966.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F272.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D647.80
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F446.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.42
Mouse Schwann, donor1.CNhs12507.11728-123D9195.22
Mouse Schwann, donor2.CNhs12573.11746-123F9114.11
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G376.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F760.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C4238.67
Mouse hepatocyte, donor3.CNhs12615.11637-122C898.23
Mouse hepatocyte, donor6.CNhs13090.11822-124F462.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F660.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A786.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I773.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E368.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I855.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H198.81
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8142.69
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6227.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1107.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2111.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3104.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B689.29
accessory axillary lymph node, adult.CNhs10475.1063-29H929.00
adrenal gland, adult.CNhs10508.49-24D723.75
adrenal gland, embryo E14.CNhs11038.406-44C525.16
adrenal gland, embryo E16.CNhs11004.1254-43D623.44
adrenal gland, embryo E17.CNhs11043.1263-45I136.67
adrenal gland, embryo E18.CNhs11026.1262-18F529.09
adrenal gland, neonate N00.CNhs11191.1311-23C127.40
adrenal gland, neonate N25.CNhs11223.1377-27I330.91
amnion, adult pregnant day17.5.CNhs10488.583-22A826.45
aorta, adult.CNhs10498.46-23H131.96
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F522.49
bone (os femoris), neonate N16.CNhs11225.1525-43A624.29
bone (os femoris), neonate N20.CNhs11195.1350-25C326.67
cecum, adult.CNhs10467.37-13H478.28
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H7105.25
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C739.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D140.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.38
corpora quadrigemina, adult.CNhs10501.16-22A415.43
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F128.65
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A231.85
epididymis, adult.CNhs10490.58-23B228.56
eyeball, adult.CNhs10484.31-12G441.88
eyeball, embryo E12.CNhs11016.345-16C634.61
eyeball, embryo E14.CNhs10521.399-16E228.51
eyeball, embryo E15.CNhs10593.426-16C923.23
eyeball, embryo E17.CNhs11023.1261-18D424.26
eyeball, neonate N00.CNhs11207.633-15C623.13
eyeball, neonate N01.CNhs11140.1532-43E722.16
eyeball, neonate N02.CNhs11205.1551-44G820.90
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E236.65
forelimb, embryo E12.CNhs10600.359-14H224.58
forelimb, embryo E13.CNhs10589.384-1E221.29
forelimb, embryo E14.CNhs10577.413-26A818.85
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C430.30
forelimb, embryo E18.CNhs11008.1520-43B532.10
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C841.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.11
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.39
heart, embryo E11.CNhs10586.331-24E923.82
heart, embryo E12.CNhs11015.353-12F525.56
heart, embryo E13.CNhs11013.376-3I927.01
heart, embryo E14.CNhs10597.403-26D422.02
heart, embryo E15.CNhs11017.431-16C824.40
heart, embryo E16.CNhs11021.457-17C621.29
heart, embryo E17.CNhs11025.479-18E521.16
heart, embryo E18.CNhs11030.1283-20G326.29
heart, neonate N00.CNhs11213.639-21E321.72
heart, neonate N03.CNhs11221.1349-25I221.56
heart, neonate N10.CNhs11118.749-24G120.19
heart, neonate N16.CNhs11209.782-15G121.56
heart, neonate N20.CNhs11127.821-26I623.83
heart, neonate N25.CNhs11196.1351-25D334.25
heart, neonate N30.CNhs11202.1390-42D235.43
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G126.96
intestinal mucosa, adult.CNhs10506.860-29I3274.91
intestine, adult.CNhs10496.178-9A3196.49
intestine, embryo E12.CNhs11019.1251-16I530.29
intestine, embryo E13.CNhs11010.381-16D526.94
intestine, embryo E15.CNhs10602.976-16D836.47
intestine, embryo E16.CNhs10585.463-22H431.87
intestine, embryo E17.CNhs10582.482-18D329.58
intestine, embryo E18.CNhs10526.1289-20F737.09
intestine, neonate N00.CNhs11126.644-26D1140.46
intestine, neonate N01.CNhs11192.1322-23E957.81
intestine, neonate N06.CNhs11102.688-20B845.24
intestine, neonate N07.CNhs11095.720-20F239.79
intestine, neonate N10.CNhs11098.755-23A543.09
intestine, neonate N20.CNhs11187.827-18D1134.82
intestine, neonate N25.CNhs11121.1352-25E3136.38
intestine, neonate N30.CNhs11131.1384-42G1132.23
kidney, embryo E14.CNhs10606.411-4I927.12
kidney, embryo E15.CNhs10997.434-16F831.19
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I228.10
kidney, embryo E18.CNhs11001.1288-20C730.64
kidney, neonate N00.CNhs11214.646-21G733.81
kidney, neonate N10.CNhs11206.758-6D534.40
kidney, neonate N20.CNhs11113.832-19I162.29
kidney, neonate N25.CNhs11122.1353-25F356.99
kidney, neonate N30.CNhs11203.1385-42H170.34
liver, adult pregnant day01.CNhs10466.508-5B292.79
liver, embryo E12.CNhs10601.355-15F836.21
liver, embryo E13.CNhs10524.378-3H643.44
liver, embryo E14.CNhs10594.409-16E136.43
liver, embryo E15.CNhs10520.433-16D732.25
liver, embryo E16.CNhs10523.462-17F534.01
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G422.73
liver, neonate N00.CNhs11117.641-24F426.43
liver, neonate N03.CNhs11123.1345-25G246.40
liver, neonate N06.CNhs11101.684-20A858.94
liver, neonate N07.CNhs11103.716-20H246.15
liver, neonate N10.CNhs11115.751-24B950.55
liver, neonate N20.CNhs11220.823-25A368.95
liver, neonate N25.CNhs11198.1368-26H196.87
liver, neonate N30.CNhs11106.1382-42D188.77
lung, adult.CNhs10474.28-22B127.34
lung, embryo E12.CNhs10522.354-16G227.29
lung, embryo E14.CNhs10604.404-26F826.73
lung, embryo E15.CNhs11020.432-17C534.63
lung, embryo E16.CNhs10998.458-17B629.34
lung, embryo E17.CNhs10605.480-44A618.76
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C622.44
lung, neonate N06.CNhs11212.683-20E527.43
lung, neonate N07.CNhs11111.715-19A330.34
lung, neonate N10.CNhs11219.750-23E621.69
lung, neonate N20.CNhs11109.822-18A424.74
lung, neonate N25.CNhs11119.1359-25C734.71
lung, neonate N30.CNhs11133.1394-42H234.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A140.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.21
mammary gland, adult lactating day02.CNhs10480.595-22B675.73
mammary gland, adult pregnant day19.CNhs10476.588-5H228.97
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A322.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7170.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C243.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E190.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E290.19
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E346.75
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D775.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D857.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D955.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D482.99
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D572.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D668.38
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I719.30
ovary, embryo E18.CNhs11040.505-44H717.81
ovary, neonate N00.CNhs11217.1299-22I420.85
oviduct, adult pregnant day01.CNhs10500.988-6G629.53
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F439.57
pancreas, embryo E15.CNhs11042.1556-45F238.09
pancreas, embryo E16.CNhs11003.460-26E528.10
pancreas, embryo E17.CNhs10599.1558-45G323.62
pancreas, embryo E18.CNhs10580.1535-43I722.75
pancreas, neonate N00.CNhs11105.645-26G941.35
pancreas, neonate N01.CNhs11138.1531-43D724.72
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E627.73
pituitary gland, embryo E13.CNhs11009.370-44C721.21
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B912.77
pituitary gland, embryo E16.CNhs11036.449-43F618.73
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I738.25
placenta, adult pregnant day17.CNhs10464.577-18G319.91
prostate, adult.CNhs10470.859-1F815.22
skin, adult.CNhs10492.30-1C356.56
skin, neonate N00.CNhs11124.650-25G439.07
skin, neonate N03.CNhs11215.662-22H349.16
skin, neonate N06.CNhs11097.693-20I552.17
skin, neonate N10.CNhs11108.762-6C452.53
small intestine, neonate N16.CNhs11114.790-21I197.94
spinal cord, adult.CNhs10505.24-13C918.91
spleen, adult.CNhs10465.25-2G217.60
spleen, embryo E16.CNhs11035.461-43C131.78
spleen, embryo E18.CNhs11011.1271-21F226.30
spleen, neonate N10.CNhs11116.752-24D123.73
spleen, neonate N20.CNhs11112.824-19H123.92
spleen, neonate N25.CNhs11099.1354-25G322.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C683.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C972.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D376.15
stomach, adult.CNhs10503.33-1H659.19
stomach, embryo E12.CNhs10588.356-43E325.47
stomach, embryo E15.CNhs10603.1252-16G826.23
stomach, embryo E16.CNhs11022.459-17D428.73
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C625.77
stomach, neonate N03.CNhs11193.1340-24B845.45
stomach, neonate N07.CNhs11210.718-18A939.59
stomach, neonate N25.CNhs11104.1355-25E470.94
stomach, neonate N30.CNhs11134.1386-42I196.30
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F524.82
testis, embryo E15.CNhs11034.443-27C520.52
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I523.77
testis, embryo E18.CNhs11027.503-18G516.73
testis, neonate N00.CNhs11189.1300-22B716.43
testis, neonate N07.CNhs11222.726-26I422.66
testis, neonate N10.CNhs11204.763-44D914.26
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B516.12
thymus, embryo E14.CNhs11041.402-44I431.22
thymus, embryo E15.CNhs11005.430-45I228.35
thymus, embryo E16.CNhs11002.456-26C528.45
thymus, embryo E17.CNhs10581.478-18C117.90
thymus, embryo E18.CNhs10595.1273-19G415.30
thymus, neonate N02.CNhs11181.1541-43F821.03
thymus, neonate N03.CNhs11137.2104-43C720.53
thymus, neonate N06.CNhs11197.681-26C420.70
thymus, neonate N07.CNhs11211.713-19D320.80
thymus, neonate N10.CNhs11194.748-24E419.06
thymus, neonate N20.CNhs11186.820-7A216.86
thymus, neonate N25.CNhs11125.1362-25G718.76
thymus, neonate N30.CNhs11132.1393-42G213.67
tongue, adult.CNhs10499.32-1B439.90
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3116.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7122.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5116.85
urinary bladder, adult.CNhs10481.879-12E423.76
uterus, adult pregnant day19.CNhs10497.590-15F524.02
uterus, adult.CNhs10509.92-27E556.96
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I848.26
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H222.71
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B126.41
whole body, embryo E16.CNhs10514.453-14F226.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G527.11
whole body, embryo E17.5.CNhs10513.490-9F926.81
whole body, embryo E17.CNhs10517.475-3I521.73
whole body, embryo E18.CNhs10516.493-3B323.39
whole body, neonate N00.CNhs10525.657-19C224.50
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D115.00
whole body, neonate N10.CNhs10518.761-6B414.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell7.74e-1570
epithelial cell2.70e-1225
endodermal cell4.78e-1120
endo-epithelial cell5.10e-0915
stem cell2.19e-0897

Uber anatomy
Ontology termp-valuen
intestine1.78e-1131
mucosa1.44e-0915
gastrointestinal system1.02e-0847
intestinal mucosa2.44e-0813
wall of intestine2.44e-0813
gastrointestinal system mucosa2.44e-0813
digestive system4.28e-07116
digestive tract4.28e-07116
primitive gut4.28e-07116
endoderm-derived structure6.58e-07118
endoderm6.58e-07118
presumptive endoderm6.58e-07118
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