FFCP PHASE1:Mm9::chr10:79599216..79599229,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79599216..79599229,-|id=chr10:79599216..79599229,-|ontology_enrichment_celltype=CL:0000117!7.71e-17!23;CL:0000337!7.71e-17!23;CL:0000221!2.76e-15!44;CL:0000133!2.76e-15!44;CL:0000055!6.98e-15!50;CL:0002319!8.07e-15!43;CL:0000393!7.50e-14!39;CL:0000211!7.50e-14!39;CL:0000540!2.34e-13!33;CL:0000047!2.34e-13!33;CL:0000031!2.34e-13!33;CL:0000404!2.34e-13!33;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-22,23;CL:0000337,2.22e-22,23;CL:0000540,2.09e-14,33;CL:0000047,2.09e-14,33;CL:0000031,2.09e-14,33;CL:0000404,2.09e-14,33;CL:0002319,4.67e-13,43;CL:0000221,1.16e-12,44;CL:0000133,1.16e-12,44;CL:0000393,1.35e-11,39;CL:0000211,1.35e-11,39;CL:0002610,4.09e-08,3;CL:0002612,4.32e-08,3;CL:0002614,1.00e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.14e-36!73;UBERON:0005743!6.14e-36!73;UBERON:0000073!2.70e-35!75;UBERON:0001016!2.70e-35!75;UBERON:0001049!4.57e-31!52;UBERON:0005068!4.57e-31!52;UBERON:0006241!4.57e-31!52;UBERON:0007135!4.57e-31!52;UBERON:0000955!4.16e-29!50;UBERON:0006238!4.16e-29!50;UBERON:0004121!1.16e-28!102;UBERON:0000924!1.16e-28!102;UBERON:0006601!1.16e-28!102;UBERON:0002616!3.32e-28!49;UBERON:0002020!7.55e-26!34;UBERON:0002346!1.23e-23!71;UBERON:0003075!1.23e-23!71;UBERON:0007284!1.23e-23!71;UBERON:0000033!3.67e-23!63;UBERON:0003080!4.19e-23!40;UBERON:0002780!2.84e-22!39;UBERON:0001890!2.84e-22!39;UBERON:0006240!2.84e-22!39;UBERON:0002791!5.38e-21!29;UBERON:0003528!5.38e-21!29;UBERON:0001893!5.38e-21!29;UBERON:0003056!6.67e-19!49;UBERON:0007811!5.41e-15!86;UBERON:0000956!7.52e-15!21;UBERON:0001869!7.52e-15!21;UBERON:0000203!7.52e-15!21;UBERON:0002619!6.32e-14!17;UBERON:0000153!1.50e-13!94;UBERON:0002021!2.79e-10!10;UBERON:0000411!2.79e-10!10;UBERON:0001950!2.79e-10!10;UBERON:0000025!7.09e-09!114;UBERON:0003076!2.87e-08!12;UBERON:0003057!2.87e-08!12;UBERON:0004111!3.58e-08!122;UBERON:0002420!2.56e-07!8;UBERON:0007245!2.56e-07!8;UBERON:0010009!2.56e-07!8;UBERON:0010011!2.56e-07!8;UBERON:0000454!2.56e-07!8;UBERON:0002240!8.36e-07!6;UBERON:0005174!8.36e-07!6;UBERON:0001137!8.36e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-40,73;UBERON:0000073,5.91e-40,54;UBERON:0001016,3.38e-39,75;UBERON:0002020,4.05e-37,34;UBERON:0001049,9.68e-36,52;UBERON:0005068,9.68e-36,52;UBERON:0006241,9.68e-36,52;UBERON:0007135,9.68e-36,52;UBERON:0004121,2.81e-29,95;UBERON:0000924,2.81e-29,95;UBERON:0006601,2.81e-29,95;UBERON:0002346,1.08e-27,64;UBERON:0003075,1.08e-27,64;UBERON:0007284,1.08e-27,64;UBERON:0003080,5.34e-27,40;UBERON:0003528,9.41e-27,29;UBERON:0002791,9.41e-27,29;UBERON:0001893,9.41e-27,29;UBERON:0000955,1.77e-26,47;UBERON:0006238,1.77e-26,47;UBERON:0002780,2.39e-25,39;UBERON:0001890,2.39e-25,39;UBERON:0006240,2.39e-25,39;UBERON:0002616,7.52e-25,46;UBERON:0010371,2.17e-23,73;UBERON:0002021,1.21e-22,10;UBERON:0000411,1.21e-22,10;UBERON:0001950,1.21e-22,10;UBERON:0003056,5.81e-21,49;UBERON:0010314,4.52e-17,92;UBERON:0000956,5.39e-16,21;UBERON:0001869,5.39e-16,21;UBERON:0000203,5.39e-16,21;UBERON:0002619,7.25e-15,17;UBERON:0002240,3.01e-14,6;UBERON:0005174,3.01e-14,6;UBERON:0001137,3.01e-14,6;UBERON:0001948,1.71e-12,5;UBERON:0002315,1.71e-12,5;UBERON:0002420,2.14e-12,8;UBERON:0007245,2.14e-12,8;UBERON:0010009,2.14e-12,8;UBERON:0010011,2.14e-12,8;UBERON:0000454,2.14e-12,8;UBERON:0000025,2.16e-12,114;UBERON:0004111,4.13e-11,122;UBERON:0011216,5.01e-11,194;UBERON:0002950,1.48e-09,4;UBERON:0001891,1.48e-09,4;UBERON:0009616,1.48e-09,4;UBERON:0010286,1.48e-09,4;UBERON:0003076,7.50e-09,12;UBERON:0003057,7.50e-09,12;UBERON:0004684,4.09e-08,3;UBERON:0002275,4.09e-08,3;UBERON:0002257,4.32e-08,3;UBERON:0002038,1.00e-07,3;UBERON:0009663,1.00e-07,3;UBERON:0009661,1.00e-07,3;UBERON:0000125,1.00e-07,3;UBERON:0002308,1.00e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.550640256485045,0,0.218025156380447,0.659058548203415,0.388859798148567,0,1.43752564364972,0,0,0,0.257259436035947,0,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.03689612308478,0.945041568321835,0,2.57085885963423,2.42955395046775,0.244981598429908,0.479227355091182,0.919218786610021,2.20231761998777,2.93680877595932,2.76491759861238,1.18697658957174,1.18933936683133,0.52091337055676,3.35019598801657,1.68828783009504,2.13917546887534,4.12480019663135,2.27794689278565,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0,0,0,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,1.64769703345305,1.37250180845588,1.25654352112864,1.56441888173049,1.02286182932132,4.77912502486988,0.486723789203273,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.472905432318573,0,0,0,0,0,0,0,0,0.275936746304732,1.44495530989013,0.703270119553219,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0,0.987294123612726,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,4.58316410751517,2.40594455281163,2.05524755931193,2.2661816921691,2.02506750069542,1.80128481289688,2.26571204492102,3.62432218226274,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0|short_description=p@chr10:79599216..79599229,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:79599216..79599229,- | |||
|description=CAGE_peak_at_chr10:79599216..79599229,- | |||
|id=chr10:79599216..79599229,- | |||
|ontology_enrichment_celltype=CL:0000117!7.71e-17!23;CL:0000337!7.71e-17!23;CL:0000221!2.76e-15!44;CL:0000133!2.76e-15!44;CL:0000055!6.98e-15!50;CL:0002319!8.07e-15!43;CL:0000393!7.50e-14!39;CL:0000211!7.50e-14!39;CL:0000540!2.34e-13!33;CL:0000047!2.34e-13!33;CL:0000031!2.34e-13!33;CL:0000404!2.34e-13!33;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-22,23;CL:0000337,2.22e-22,23;CL:0000540,2.09e-14,33;CL:0000047,2.09e-14,33;CL:0000031,2.09e-14,33;CL:0000404,2.09e-14,33;CL:0002319,4.67e-13,43;CL:0000221,1.16e-12,44;CL:0000133,1.16e-12,44;CL:0000393,1.35e-11,39;CL:0000211,1.35e-11,39;CL:0002610,4.09e-08,3;CL:0002612,4.32e-08,3;CL:0002614,1.00e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.14e-36!73;UBERON:0005743!6.14e-36!73;UBERON:0000073!2.70e-35!75;UBERON:0001016!2.70e-35!75;UBERON:0001049!4.57e-31!52;UBERON:0005068!4.57e-31!52;UBERON:0006241!4.57e-31!52;UBERON:0007135!4.57e-31!52;UBERON:0000955!4.16e-29!50;UBERON:0006238!4.16e-29!50;UBERON:0004121!1.16e-28!102;UBERON:0000924!1.16e-28!102;UBERON:0006601!1.16e-28!102;UBERON:0002616!3.32e-28!49;UBERON:0002020!7.55e-26!34;UBERON:0002346!1.23e-23!71;UBERON:0003075!1.23e-23!71;UBERON:0007284!1.23e-23!71;UBERON:0000033!3.67e-23!63;UBERON:0003080!4.19e-23!40;UBERON:0002780!2.84e-22!39;UBERON:0001890!2.84e-22!39;UBERON:0006240!2.84e-22!39;UBERON:0002791!5.38e-21!29;UBERON:0003528!5.38e-21!29;UBERON:0001893!5.38e-21!29;UBERON:0003056!6.67e-19!49;UBERON:0007811!5.41e-15!86;UBERON:0000956!7.52e-15!21;UBERON:0001869!7.52e-15!21;UBERON:0000203!7.52e-15!21;UBERON:0002619!6.32e-14!17;UBERON:0000153!1.50e-13!94;UBERON:0002021!2.79e-10!10;UBERON:0000411!2.79e-10!10;UBERON:0001950!2.79e-10!10;UBERON:0000025!7.09e-09!114;UBERON:0003076!2.87e-08!12;UBERON:0003057!2.87e-08!12;UBERON:0004111!3.58e-08!122;UBERON:0002420!2.56e-07!8;UBERON:0007245!2.56e-07!8;UBERON:0010009!2.56e-07!8;UBERON:0010011!2.56e-07!8;UBERON:0000454!2.56e-07!8;UBERON:0002240!8.36e-07!6;UBERON:0005174!8.36e-07!6;UBERON:0001137!8.36e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-40,73;UBERON:0000073,5.91e-40,54;UBERON:0001016,3.38e-39,75;UBERON:0002020,4.05e-37,34;UBERON:0001049,9.68e-36,52;UBERON:0005068,9.68e-36,52;UBERON:0006241,9.68e-36,52;UBERON:0007135,9.68e-36,52;UBERON:0004121,2.81e-29,95;UBERON:0000924,2.81e-29,95;UBERON:0006601,2.81e-29,95;UBERON:0002346,1.08e-27,64;UBERON:0003075,1.08e-27,64;UBERON:0007284,1.08e-27,64;UBERON:0003080,5.34e-27,40;UBERON:0003528,9.41e-27,29;UBERON:0002791,9.41e-27,29;UBERON:0001893,9.41e-27,29;UBERON:0000955,1.77e-26,47;UBERON:0006238,1.77e-26,47;UBERON:0002780,2.39e-25,39;UBERON:0001890,2.39e-25,39;UBERON:0006240,2.39e-25,39;UBERON:0002616,7.52e-25,46;UBERON:0010371,2.17e-23,73;UBERON:0002021,1.21e-22,10;UBERON:0000411,1.21e-22,10;UBERON:0001950,1.21e-22,10;UBERON:0003056,5.81e-21,49;UBERON:0010314,4.52e-17,92;UBERON:0000956,5.39e-16,21;UBERON:0001869,5.39e-16,21;UBERON:0000203,5.39e-16,21;UBERON:0002619,7.25e-15,17;UBERON:0002240,3.01e-14,6;UBERON:0005174,3.01e-14,6;UBERON:0001137,3.01e-14,6;UBERON:0001948,1.71e-12,5;UBERON:0002315,1.71e-12,5;UBERON:0002420,2.14e-12,8;UBERON:0007245,2.14e-12,8;UBERON:0010009,2.14e-12,8;UBERON:0010011,2.14e-12,8;UBERON:0000454,2.14e-12,8;UBERON:0000025,2.16e-12,114;UBERON:0004111,4.13e-11,122;UBERON:0011216,5.01e-11,194;UBERON:0002950,1.48e-09,4;UBERON:0001891,1.48e-09,4;UBERON:0009616,1.48e-09,4;UBERON:0010286,1.48e-09,4;UBERON:0003076,7.50e-09,12;UBERON:0003057,7.50e-09,12;UBERON:0004684,4.09e-08,3;UBERON:0002275,4.09e-08,3;UBERON:0002257,4.32e-08,3;UBERON:0002038,1.00e-07,3;UBERON:0009663,1.00e-07,3;UBERON:0009661,1.00e-07,3;UBERON:0000125,1.00e-07,3;UBERON:0002308,1.00e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.550640256485045,0,0.218025156380447,0.659058548203415,0.388859798148567,0,1.43752564364972,0,0,0,0.257259436035947,0,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.03689612308478,0.945041568321835,0,2.57085885963423,2.42955395046775,0.244981598429908,0.479227355091182,0.919218786610021,2.20231761998777,2.93680877595932,2.76491759861238,1.18697658957174,1.18933936683133,0.52091337055676,3.35019598801657,1.68828783009504,2.13917546887534,4.12480019663135,2.27794689278565,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0,0,0,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,1.64769703345305,1.37250180845588,1.25654352112864,1.56441888173049,1.02286182932132,4.77912502486988,0.486723789203273,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.472905432318573,0,0,0,0,0,0,0,0,0.275936746304732,1.44495530989013,0.703270119553219,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0,0.987294123612726,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,4.58316410751517,2.40594455281163,2.05524755931193,2.2661816921691,2.02506750069542,1.80128481289688,2.26571204492102,3.62432218226274,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr10:79599216..79599229,- | |||
}} |
Latest revision as of 19:21, 4 August 2015
Short description: | p@chr10:79599216..79599229, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79599216..79599229, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.22e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-22 | 23 |
neuron | 2.09e-14 | 33 |
neuronal stem cell | 2.09e-14 | 33 |
neuroblast | 2.09e-14 | 33 |
electrically signaling cell | 2.09e-14 | 33 |
neural cell | 4.67e-13 | 43 |
ectodermal cell | 1.16e-12 | 44 |
neurectodermal cell | 1.16e-12 | 44 |
electrically responsive cell | 1.35e-11 | 39 |
electrically active cell | 1.35e-11 | 39 |
raphe nuclei neuron | 4.09e-08 | 3 |
neuron of the ventral spinal cord | 4.32e-08 | 3 |
neuron of the substantia nigra | 1.00e-07 | 3 |