FFCP PHASE1:Hg19::chr2:236402541..236402550,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16922 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPQ3 | |||
|association_with_transcript=-182bp_to_ENST00000409457,NM_001037131,NM_001244888,NM_014914_5end | |||
|cluster_id=chr2:236402541..236402550,+ | |||
|description=CAGE_peak_9_at_AGAP1_5end | |||
|id=chr2:236402541..236402550,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.09e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;5.71e-09;2!DOID:962;5.71e-09;2!DOID:3307;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.71e-09,2;DOID:3193,6.94e-09,2;DOID:962,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-20!82;UBERON:0001869!1.74e-20!32;UBERON:0001950!2.63e-20!20;UBERON:0002619!3.09e-20!22;UBERON:0001893!3.61e-20!34;UBERON:0005743!7.70e-20!86;UBERON:0001049!1.21e-19!57;UBERON:0005068!1.21e-19!57;UBERON:0006241!1.21e-19!57;UBERON:0007135!1.21e-19!57;UBERON:0000955!1.34e-19!69;UBERON:0006238!1.34e-19!69;UBERON:0000073!3.27e-19!94;UBERON:0001016!3.27e-19!94;UBERON:0002791!4.75e-19!33;UBERON:0002020!1.52e-18!34;UBERON:0003528!1.52e-18!34;UBERON:0007023!3.80e-18!115;UBERON:0002616!4.28e-18!59;UBERON:0002780!1.35e-17!41;UBERON:0001890!1.35e-17!41;UBERON:0006240!1.35e-17!41;UBERON:0000956!5.32e-17!25;UBERON:0000203!5.32e-17!25;UBERON:0003080!6.03e-17!42;UBERON:0002346!6.15e-16!90;UBERON:0003075!2.23e-15!86;UBERON:0007284!2.23e-15!86;UBERON:0000033!8.02e-12!123;UBERON:0003056!3.55e-11!61;UBERON:0000924!5.60e-11!173;UBERON:0006601!5.60e-11!173;UBERON:0000153!1.41e-10!129;UBERON:0007811!1.41e-10!129;UBERON:0004121!1.88e-10!169;UBERON:0000200!1.73e-08!6;UBERON:0001871!6.45e-08!7;UBERON:0002021!2.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.19e-42;22!UBERON:0000956;6.74e-37;25!UBERON:0000203;6.74e-37;25!UBERON:0001950;3.69e-35;20!UBERON:0001869;2.24e-31;32!UBERON:0001893;1.22e-30;34!UBERON:0002791;1.44e-25;32!UBERON:0003528;2.38e-23;34!UBERON:0002020;2.38e-23;34!UBERON:0002780;1.27e-21;41!UBERON:0001890;1.27e-21;41!UBERON:0002581;1.31e-16;1!UBERON:0002902;1.31e-16;1!UBERON:0002022;1.31e-16;1!UBERON:0003112;1.31e-16;1!UBERON:0011158;1.31e-16;1!UBERON:0009899;1.31e-16;1!UBERON:0007190;1.31e-16;1!UBERON:0003128;1.31e-16;1!UBERON:0001703;1.31e-16;1!UBERON:0002241;1.31e-16;1!UBERON:0000349;2.30e-13;5!UBERON:0000073;2.79e-13;53!UBERON:0002616;2.79e-13;53!UBERON:0001872;3.43e-13;5!UBERON:0002021;3.43e-13;5!UBERON:0000200;3.75e-11;6!UBERON:0001871;8.16e-10;6!UBERON:0001876;3.43e-09;2!UBERON:0001954;5.71e-09;2!UBERON:0003714;5.71e-09;2!UBERON:0003022;5.71e-09;2!UBERON:0002421;5.71e-09;2!UBERON:0002600;5.71e-09;2!UBERON:0000955;1.45e-08;68!UBERON:0001016;4.48e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.08e-42,22;UBERON:0000956,6.01e-37,25;UBERON:0000203,6.01e-37,25;UBERON:0001869,1.08e-36,32;UBERON:0001950,2.72e-35,20;UBERON:0001893,1.45e-34,34;UBERON:0002791,5.12e-29,32;UBERON:0002780,1.06e-28,41;UBERON:0001890,1.06e-28,41;UBERON:0003080,1.06e-28,41;UBERON:0006240,1.06e-28,41;UBERON:0003528,2.48e-27,34;UBERON:0002020,2.48e-27,34;UBERON:0000073,3.53e-22,53;UBERON:0002616,3.53e-22,53;UBERON:0001049,5.65e-21,56;UBERON:0005068,5.65e-21,56;UBERON:0006241,5.65e-21,56;UBERON:0007135,5.65e-21,56;UBERON:0003056,3.16e-19,61;UBERON:0000955,6.04e-17,68;UBERON:0006238,6.04e-17,68;UBERON:0002902,6.47e-17,1;UBERON:0009899,6.47e-17,1;UBERON:0002022,7.57e-17,1;UBERON:0007190,1.04e-16,1;UBERON:0002581,1.41e-16,1;UBERON:0003112,1.65e-16,1;UBERON:0011158,1.65e-16,1;UBERON:0003128,1.65e-16,1;UBERON:0001703,1.65e-16,1;UBERON:0002241,1.65e-16,1;UBERON:0004761,1.65e-16,1;UBERON:0009617,1.65e-16,1;UBERON:0001016,1.02e-15,89;UBERON:0001017,3.58e-14,81;UBERON:0003075,3.58e-14,82;UBERON:0007284,3.58e-14,82;UBERON:0002346,1.75e-13,86;UBERON:0002021,2.52e-13,5;UBERON:0000349,2.85e-13,5;UBERON:0001872,4.66e-13,5;UBERON:0007023,1.63e-12,114;UBERON:0000200,3.57e-11,6;UBERON:0010371,4.93e-11,104;UBERON:0010314,1.38e-10,132;UBERON:0001871,7.31e-10,6;UBERON:0001876,3.43e-09,2;UBERON:0005253,6.42e-09,2;UBERON:0003714,6.94e-09,2;UBERON:0001954,7.49e-09,2;UBERON:0003022,7.49e-09,2;UBERON:0002421,7.49e-09,2;UBERON:0002600,7.49e-09,2;UBERON:0004121,7.56e-08,171;UBERON:0000924,7.56e-08,171;UBERON:0006601,7.56e-08,171;UBERON:0011216,4.35e-07,223 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.487894824518382,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.307007349452259,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.844175070377856,0,0.221158519862449,0.295547618953547,0.87754158861589,0,0,0.153900517007594,0,0.23056390438806,0.179515288819544,0.434589487688032,0,0,0,0,0,0,0,0.19606253431774,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.949661939338181,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,1.0896272488926,0.482259445395058,0.137539436597234,0,0,0,1.51873891645062,0,0,0.577000469484979,0,0,0,0,0.662091970365432,0.5085370753095,0,0,0,0,0.164185041498678,0.340776043570843,0,0,0,0,0.39669780522807,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.3755727921195,0,0.110929051536852,0.0620964029413835,0.276697269872462,0.124980407962107,0,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0.453692771289717,0.466311601748341,0,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0.127894371303652,0,0,0,0,0.425149840203366,0.247871528518004,1.11728983594649,0,1.02520268501629,0,0,0,0.770750701157514,1.41696576325585,0.638535436228605,0.615349092722265,0.504143392443436,1.72893131160545,1.29180516505481,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,1.41828927698629,0,0.620060389503552,1.07806877329642,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0.543757863814654,1.38122824481983,0,0,0,0.628462359664008,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.414432328326074,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.594600453887843,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0.157771562193185,1.49581278420012,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0.0814032686109745,0,1.9307228228694,0,0,0.733448665097199,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p9@AGAP1 | |||
}} |
Latest revision as of 01:48, 16 September 2015
Short description: | p9@AGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -182bp_to_ENST00000409457, NM_001037131, NM_001244888, NM_014914_5end |
EntrezGene: | AGAP1 |
HGNC: | 16922 |
UniProt: | Q9UPQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
teratoma | 3.71e-09 | 2 |
peripheral nerve sheath neoplasm | 6.94e-09 | 2 |
neurofibroma | 6.94e-09 | 2 |