FFCP PHASE1:Mm9::chr10:77008884..77008902,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=116|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:77008884..77008902,+|id=chr10:77008884..77008902,+|ontology_enrichment_celltype=CL:0002031!1.07e-20!25;CL:0000988!8.75e-20!32;CL:0002032!8.75e-20!32;CL:0000037!8.75e-20!32;CL:0000566!8.75e-20!32;CL:0000837!8.75e-20!32;CL:0000738!7.86e-19!17;CL:0002087!7.86e-19!17;CL:0002320!6.25e-16!46;CL:0000134!6.25e-16!46;CL:0000838!4.27e-15!12;CL:0000084!7.11e-14!11;CL:0000827!7.11e-14!11;CL:0000542!1.17e-13!13;CL:0000051!1.17e-13!13;CL:0000219!2.99e-13!54;CL:0000791!5.63e-12!9;CL:0000789!5.63e-12!9;CL:0002420!5.63e-12!9;CL:0002419!5.63e-12!9;CL:0000790!5.63e-12!9;CL:0000624!7.63e-11!8;CL:0000763!1.16e-08!16;CL:0000063!1.25e-08!66;CL:0000893!2.59e-08!6;CL:0002489!2.59e-08!6;CL:0000898!2.59e-08!6;CL:0000809!2.59e-08!6;CL:0000810!2.59e-08!6;CL:0000895!2.59e-08!6;CL:0000808!2.59e-08!6;CL:0000894!2.59e-08!6;CL:0000806!2.59e-08!6;CL:0000807!2.59e-08!6;CL:0000805!2.59e-08!6;CL:0002425!2.59e-08!6;CL:0002436!2.59e-08!6;CL:0002427!2.59e-08!6;CL:0002428!2.59e-08!6;CL:0002429!2.59e-08!6;CL:0002433!2.59e-08!6;CL:0002431!2.59e-08!6;CL:0002432!2.59e-08!6;CL:0000723!3.03e-08!91;CL:0000048!3.03e-08!91;CL:0000049!3.40e-08!19;CL:0000839!1.22e-07!13;CL:0000557!3.41e-07!7;CL:0000034!3.53e-07!97|ontology_enrichment_celltype_v019_2=CL:0000738,1.19e-21,17;CL:0002087,1.19e-21,17;CL:0002092,4.11e-16,3;CL:0002540,4.11e-16,3;CL:0000624,9.99e-15,8;CL:0002031,2.27e-14,25;CL:0000838,9.58e-14,12;CL:0002320,1.54e-13,46;CL:0000134,1.54e-13,46;CL:0000791,4.39e-13,9;CL:0000789,4.39e-13,9;CL:0002420,4.39e-13,9;CL:0002419,4.39e-13,9;CL:0000790,4.39e-13,9;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0002194,8.88e-12,4;CL:0000766,8.88e-12,4;CL:0000234,8.88e-12,4;CL:0000576,8.88e-12,4;CL:0000235,8.88e-12,4;CL:0000864,8.88e-12,4;CL:0002009,8.88e-12,4;CL:0000040,8.88e-12,4;CL:0000559,8.88e-12,4;CL:0000219,2.85e-11,54;CL:0002476,3.10e-11,2;CL:0000988,5.60e-11,32;CL:0002032,5.60e-11,32;CL:0000037,5.60e-11,32;CL:0000837,5.60e-11,32;CL:0000084,1.09e-10,11;CL:0000827,1.09e-10,11;CL:0000723,5.02e-10,91;CL:0000048,5.02e-10,91;CL:0000034,2.89e-09,97;CL:0000893,1.22e-07,6;CL:0002489,1.22e-07,6;CL:0000898,1.22e-07,6;CL:0000809,1.22e-07,6;CL:0000810,1.22e-07,6;CL:0000895,1.22e-07,6;CL:0000808,1.22e-07,6;CL:0000894,1.22e-07,6;CL:0000806,1.22e-07,6;CL:0000807,1.22e-07,6;CL:0000805,1.22e-07,6;CL:0002425,1.22e-07,6;CL:0002436,1.22e-07,6;CL:0002427,1.22e-07,6;CL:0002428,1.22e-07,6;CL:0002429,1.22e-07,6;CL:0002433,1.22e-07,6;CL:0002431,1.22e-07,6;CL:0002432,1.22e-07,6;CL:0000473,6.15e-07,7;CL:0000557,6.15e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,6.53e-16,3;DOID:4045,6.53e-16,3;DOID:0050686,3.27e-08,6|ontology_enrichment_uberon=UBERON:0002193!1.14e-17!48;UBERON:0002390!8.93e-17!45;UBERON:0003061!8.93e-17!45;UBERON:0002384!6.25e-16!46;UBERON:0002371!2.36e-15!16;UBERON:0002204!1.95e-13!32;UBERON:0001474!1.29e-11!22;UBERON:0004765!1.29e-11!22;UBERON:0001434!1.29e-11!22;UBERON:0002405!3.67e-11!70;UBERON:0003081!1.51e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.54e-13,46;UBERON:0002204,1.13e-11,32;UBERON:0002371,5.25e-11,16;UBERON:0001474,7.05e-08,22;UBERON:0004765,7.05e-08,22;UBERON:0001434,7.05e-08,22;UBERON:0002390,9.97e-08,45;UBERON:0003061,9.97e-08,45;UBERON:0002193,3.61e-07,48;UBERON:0002405,3.61e-07,48|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0.563154888606667,0.468129052643987,0.34243593645101,1.11681022593471,2.39681021903688,2.18551006047494,0,0.404950534779652,0.699561878128147,0.315462165358238,0.959801035240171,0.84877930359606,0.17008658030214,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,15.0671387065287,10.1573594788094,5.23523743973798,14.7057872007754,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0.286533439938757,0.515672092277442,0,0,0,0,0,9.89889689009539,17.7995945262055,9.2362414942993,1.19840044207362,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,16.5870412333199,5.4390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:77008884..77008902,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:77008884..77008902,+ | |||
|description=CAGE_peak_at_chr10:77008884..77008902,+ | |||
|id=chr10:77008884..77008902,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.07e-20!25;CL:0000988!8.75e-20!32;CL:0002032!8.75e-20!32;CL:0000037!8.75e-20!32;CL:0000566!8.75e-20!32;CL:0000837!8.75e-20!32;CL:0000738!7.86e-19!17;CL:0002087!7.86e-19!17;CL:0002320!6.25e-16!46;CL:0000134!6.25e-16!46;CL:0000838!4.27e-15!12;CL:0000084!7.11e-14!11;CL:0000827!7.11e-14!11;CL:0000542!1.17e-13!13;CL:0000051!1.17e-13!13;CL:0000219!2.99e-13!54;CL:0000791!5.63e-12!9;CL:0000789!5.63e-12!9;CL:0002420!5.63e-12!9;CL:0002419!5.63e-12!9;CL:0000790!5.63e-12!9;CL:0000624!7.63e-11!8;CL:0000763!1.16e-08!16;CL:0000063!1.25e-08!66;CL:0000893!2.59e-08!6;CL:0002489!2.59e-08!6;CL:0000898!2.59e-08!6;CL:0000809!2.59e-08!6;CL:0000810!2.59e-08!6;CL:0000895!2.59e-08!6;CL:0000808!2.59e-08!6;CL:0000894!2.59e-08!6;CL:0000806!2.59e-08!6;CL:0000807!2.59e-08!6;CL:0000805!2.59e-08!6;CL:0002425!2.59e-08!6;CL:0002436!2.59e-08!6;CL:0002427!2.59e-08!6;CL:0002428!2.59e-08!6;CL:0002429!2.59e-08!6;CL:0002433!2.59e-08!6;CL:0002431!2.59e-08!6;CL:0002432!2.59e-08!6;CL:0000723!3.03e-08!91;CL:0000048!3.03e-08!91;CL:0000049!3.40e-08!19;CL:0000839!1.22e-07!13;CL:0000557!3.41e-07!7;CL:0000034!3.53e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.19e-21,17;CL:0002087,1.19e-21,17;CL:0002092,4.11e-16,3;CL:0002540,4.11e-16,3;CL:0000624,9.99e-15,8;CL:0002031,2.27e-14,25;CL:0000838,9.58e-14,12;CL:0002320,1.54e-13,46;CL:0000134,1.54e-13,46;CL:0000791,4.39e-13,9;CL:0000789,4.39e-13,9;CL:0002420,4.39e-13,9;CL:0002419,4.39e-13,9;CL:0000790,4.39e-13,9;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0002194,8.88e-12,4;CL:0000766,8.88e-12,4;CL:0000234,8.88e-12,4;CL:0000576,8.88e-12,4;CL:0000235,8.88e-12,4;CL:0000864,8.88e-12,4;CL:0002009,8.88e-12,4;CL:0000040,8.88e-12,4;CL:0000559,8.88e-12,4;CL:0000219,2.85e-11,54;CL:0002476,3.10e-11,2;CL:0000988,5.60e-11,32;CL:0002032,5.60e-11,32;CL:0000037,5.60e-11,32;CL:0000837,5.60e-11,32;CL:0000084,1.09e-10,11;CL:0000827,1.09e-10,11;CL:0000723,5.02e-10,91;CL:0000048,5.02e-10,91;CL:0000034,2.89e-09,97;CL:0000893,1.22e-07,6;CL:0002489,1.22e-07,6;CL:0000898,1.22e-07,6;CL:0000809,1.22e-07,6;CL:0000810,1.22e-07,6;CL:0000895,1.22e-07,6;CL:0000808,1.22e-07,6;CL:0000894,1.22e-07,6;CL:0000806,1.22e-07,6;CL:0000807,1.22e-07,6;CL:0000805,1.22e-07,6;CL:0002425,1.22e-07,6;CL:0002436,1.22e-07,6;CL:0002427,1.22e-07,6;CL:0002428,1.22e-07,6;CL:0002429,1.22e-07,6;CL:0002433,1.22e-07,6;CL:0002431,1.22e-07,6;CL:0002432,1.22e-07,6;CL:0000473,6.15e-07,7;CL:0000557,6.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.53e-16,3;DOID:4045,6.53e-16,3;DOID:0050686,3.27e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.14e-17!48;UBERON:0002390!8.93e-17!45;UBERON:0003061!8.93e-17!45;UBERON:0002384!6.25e-16!46;UBERON:0002371!2.36e-15!16;UBERON:0002204!1.95e-13!32;UBERON:0001474!1.29e-11!22;UBERON:0004765!1.29e-11!22;UBERON:0001434!1.29e-11!22;UBERON:0002405!3.67e-11!70;UBERON:0003081!1.51e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.54e-13,46;UBERON:0002204,1.13e-11,32;UBERON:0002371,5.25e-11,16;UBERON:0001474,7.05e-08,22;UBERON:0004765,7.05e-08,22;UBERON:0001434,7.05e-08,22;UBERON:0002390,9.97e-08,45;UBERON:0003061,9.97e-08,45;UBERON:0002193,3.61e-07,48;UBERON:0002405,3.61e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0.563154888606667,0.468129052643987,0.34243593645101,1.11681022593471,2.39681021903688,2.18551006047494,0,0.404950534779652,0.699561878128147,0.315462165358238,0.959801035240171,0.84877930359606,0.17008658030214,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,15.0671387065287,10.1573594788094,5.23523743973798,14.7057872007754,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0.286533439938757,0.515672092277442,0,0,0,0,0,9.89889689009539,17.7995945262055,9.2362414942993,1.19840044207362,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,16.5870412333199,5.4390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:77008884..77008902,+ | |||
}} |
Latest revision as of 17:46, 4 August 2015
Short description: | p@chr10:77008884..77008902, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:77008884..77008902, + |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.54e-13 | 46 |
musculoskeletal system | 1.13e-11 | 32 |
bone marrow | 5.25e-11 | 16 |
bone element | 7.05e-08 | 22 |
skeletal element | 7.05e-08 | 22 |
skeletal system | 7.05e-08 | 22 |
hematopoietic system | 9.97e-08 | 45 |
blood island | 9.97e-08 | 45 |
hemolymphoid system | 3.61e-07 | 48 |
immune system | 3.61e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.53e-16 | 3 |
muscle cancer | 6.53e-16 | 3 |
organ system cancer | 3.27e-08 | 6 |