FFCP PHASE1:Mm9::chr10:75905424..75905442,-: Difference between revisions
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{{FFCP|EntrezGene=18541|HGNC=|UniProt=Q3TQR8|association_with_transcript=88bp_to_ENSMUST00000171940_5end|description=CAGE_peak_3_at_Pcnt_5end|id=chr10:75905424..75905442,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!2.92e-09!69;UBERON:0000065!3.28e-09!41;UBERON:0001004!2.04e-08!42;UBERON:0001041!1.52e-07!92;UBERON:0004921!3.49e-07!126;UBERON:0004185!3.49e-07!126;UBERON:0001007!8.95e-07!128;UBERON:0001555!8.95e-07!128;UBERON:0007026!8.95e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-11,41;UBERON:0001004,6.53e-11,42;UBERON:0005911,2.55e-10,69;UBERON:0001041,1.15e-08,80;UBERON:0004921,3.57e-08,114;UBERON:0002048,6.02e-08,14;UBERON:0000117,6.02e-08,14;UBERON:0000171,6.02e-08,14;UBERON:0000170,6.02e-08,14;UBERON:0005597,6.02e-08,14;UBERON:0000118,6.02e-08,14;UBERON:0001007,1.16e-07,116;UBERON:0001555,1.16e-07,116;UBERON:0007026,1.16e-07,116;UBERON:0004119,3.55e-07,118;UBERON:0000925,3.55e-07,118;UBERON:0006595,3.55e-07,118;UBERON:0001048,3.92e-07,134|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,0.90739263392049,0,1.6787927191189,1.63528848416868,2.32421982194837,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.39681021903688,2.62261207256992,0.999329285446988,3.03712901084739,0,0.630924330716475,0.959801035240171,2.12194825899015,2.38121212422995,1.09220046320974,0.522399578277871,0.319984845586813,0.68822784320151,0,0,0.861884930743556,0,1.26015064879965,0.886922042621219,1.27006134691926,0,0,1.73310971850765,1.16364251750945,1.02084678131185,2.09265815368454,1.5626706890476,2.09409497589519,1.76469446409304,1.36609096991689,2.42755176515577,0.629484089877886,0.506884656097573,0,0,0.436050312760893,0,0.194429899074283,0,0,1.34226084846189,1.45072428402269,6.04968838456435,0.514518872071894,0.573066879877513,0,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,1.4209602298922,0,1.53687322128622,1.03689612308478,1.4850653216486,0.630974884054146,0,0.220868540951614,0.857435594504678,0.862609239164127,2.75765635983006,1.10115880999389,0.893811366596314,1.22885226604995,0.923204014111357,0.457438218012048,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.604572480854284,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.170430322578058,0.259786004602869,1.06001872353102,0.704217098883403,1.28326477414318,5.09610479413291,0,0.649473123033642,1.52015919285059,0,1.37020655662872,0.258937883647172,0.593768556259299,0.520455980298408,1.21786191324856,0.691846491768175,0.60289056221049,0.705532242814229,0.628332956648377,1.48316980640624,0.722996784599558,0,1.13236794963186,1.54589062922275,1.45462575940567,0,0.878342391034642,1.46612694769419,0.510914110417183,2.39630249011841,1.79970819298022,1.77898317902291,0.449371918214468,0,0.376963056338593,0.869121600961382,1.02286182932132,0.41557608911912,0.811206315338788,1.52759045775474,0.870848794270651,0.758168275301024,0.210441855886474,1.04096354370163,0.919608417733892,0.540186389416048,1.50704817835715,2.04109497453984,1.92170580427275,1.68663104207512,0,1.07783996466421,0.189106080167819,0.703804496655795,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0,0.702213187313235,0.772043721344145,1.70498099637356,1.24275463521301,0.938104239924385,0.180062061461015,0.23674473558521,0.590292695242212,0.925602677324269,2.09280550275367,1.07309360559848,2.33530684734339,1.48103864922132,1.64167464079095,1.4592385718254,1.46199987425332,0.439100230582101,2.14730270016595,0.420579897128254,0.411618449517138,0.330418782983798,0.264450566663544,0.639864751605702,1.62565670302307,2.06187938115349,0.403367049246685,2.00140239460383,1.33157938278791,1.42358718463353,0.164698954724011,2.01068167040216,1.39269530428806,0.974820435595601,0,0.648414149624083,2.19055400579804,0.379335801906163,1.02823661348756,0,2.03651327845314,0.775809948670503,1.19230893813542,0.758838445491087,0.442830443938806,0.627994911365499,1.1105744752962,0.592905254174298,1.00107063429656,2.35870794135844,2.47348323623339,3.24576194221605,0.964708639009667,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,5.75072826109418,1.86070473834252,1.5601883655728,1.01031551178845,0.717589654087649,0.482443521363367,2.40179147216586,1.13694847062291,1.62964976442026,0.339490171550376,1.87752198630802,3.01511263395268,2.14239276797412,4.29294025287157,3.15270288212382,3.76489972402917,2.71073106717728,3.27726629431476,3.10832967358612,4.77341893318988,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0.327869890753351,1.26235463602186,0.631016438832513,0.390438744296638,1.50796378412959,1.67278158566786,0.891194696329576,1.41538265394416,1.61924280669958,0.584511715822624,0.395287777946524,0.642642632843614,0.567760340833074,1.06839362200353,1.30309567482861,0.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18541 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3TQR8 | |||
|association_with_transcript=88bp_to_ENSMUST00000171940_5end | |||
|cluster_id=chr10:75905424..75905442,- | |||
|description=CAGE_peak_3_at_Pcnt_5end | |||
|id=chr10:75905424..75905442,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!2.92e-09!69;UBERON:0000065!3.28e-09!41;UBERON:0001004!2.04e-08!42;UBERON:0001041!1.52e-07!92;UBERON:0004921!3.49e-07!126;UBERON:0004185!3.49e-07!126;UBERON:0001007!8.95e-07!128;UBERON:0001555!8.95e-07!128;UBERON:0007026!8.95e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-11,41;UBERON:0001004,6.53e-11,42;UBERON:0005911,2.55e-10,69;UBERON:0001041,1.15e-08,80;UBERON:0004921,3.57e-08,114;UBERON:0002048,6.02e-08,14;UBERON:0000117,6.02e-08,14;UBERON:0000171,6.02e-08,14;UBERON:0000170,6.02e-08,14;UBERON:0005597,6.02e-08,14;UBERON:0000118,6.02e-08,14;UBERON:0001007,1.16e-07,116;UBERON:0001555,1.16e-07,116;UBERON:0007026,1.16e-07,116;UBERON:0004119,3.55e-07,118;UBERON:0000925,3.55e-07,118;UBERON:0006595,3.55e-07,118;UBERON:0001048,3.92e-07,134 | |||
|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,0.90739263392049,0,1.6787927191189,1.63528848416868,2.32421982194837,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.39681021903688,2.62261207256992,0.999329285446988,3.03712901084739,0,0.630924330716475,0.959801035240171,2.12194825899015,2.38121212422995,1.09220046320974,0.522399578277871,0.319984845586813,0.68822784320151,0,0,0.861884930743556,0,1.26015064879965,0.886922042621219,1.27006134691926,0,0,1.73310971850765,1.16364251750945,1.02084678131185,2.09265815368454,1.5626706890476,2.09409497589519,1.76469446409304,1.36609096991689,2.42755176515577,0.629484089877886,0.506884656097573,0,0,0.436050312760893,0,0.194429899074283,0,0,1.34226084846189,1.45072428402269,6.04968838456435,0.514518872071894,0.573066879877513,0,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,1.4209602298922,0,1.53687322128622,1.03689612308478,1.4850653216486,0.630974884054146,0,0.220868540951614,0.857435594504678,0.862609239164127,2.75765635983006,1.10115880999389,0.893811366596314,1.22885226604995,0.923204014111357,0.457438218012048,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.604572480854284,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.170430322578058,0.259786004602869,1.06001872353102,0.704217098883403,1.28326477414318,5.09610479413291,0,0.649473123033642,1.52015919285059,0,1.37020655662872,0.258937883647172,0.593768556259299,0.520455980298408,1.21786191324856,0.691846491768175,0.60289056221049,0.705532242814229,0.628332956648377,1.48316980640624,0.722996784599558,0,1.13236794963186,1.54589062922275,1.45462575940567,0,0.878342391034642,1.46612694769419,0.510914110417183,2.39630249011841,1.79970819298022,1.77898317902291,0.449371918214468,0,0.376963056338593,0.869121600961382,1.02286182932132,0.41557608911912,0.811206315338788,1.52759045775474,0.870848794270651,0.758168275301024,0.210441855886474,1.04096354370163,0.919608417733892,0.540186389416048,1.50704817835715,2.04109497453984,1.92170580427275,1.68663104207512,0,1.07783996466421,0.189106080167819,0.703804496655795,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0,0.702213187313235,0.772043721344145,1.70498099637356,1.24275463521301,0.938104239924385,0.180062061461015,0.23674473558521,0.590292695242212,0.925602677324269,2.09280550275367,1.07309360559848,2.33530684734339,1.48103864922132,1.64167464079095,1.4592385718254,1.46199987425332,0.439100230582101,2.14730270016595,0.420579897128254,0.411618449517138,0.330418782983798,0.264450566663544,0.639864751605702,1.62565670302307,2.06187938115349,0.403367049246685,2.00140239460383,1.33157938278791,1.42358718463353,0.164698954724011,2.01068167040216,1.39269530428806,0.974820435595601,0,0.648414149624083,2.19055400579804,0.379335801906163,1.02823661348756,0,2.03651327845314,0.775809948670503,1.19230893813542,0.758838445491087,0.442830443938806,0.627994911365499,1.1105744752962,0.592905254174298,1.00107063429656,2.35870794135844,2.47348323623339,3.24576194221605,0.964708639009667,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,5.75072826109418,1.86070473834252,1.5601883655728,1.01031551178845,0.717589654087649,0.482443521363367,2.40179147216586,1.13694847062291,1.62964976442026,0.339490171550376,1.87752198630802,3.01511263395268,2.14239276797412,4.29294025287157,3.15270288212382,3.76489972402917,2.71073106717728,3.27726629431476,3.10832967358612,4.77341893318988,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0.327869890753351,1.26235463602186,0.631016438832513,0.390438744296638,1.50796378412959,1.67278158566786,0.891194696329576,1.41538265394416,1.61924280669958,0.584511715822624,0.395287777946524,0.642642632843614,0.567760340833074,1.06839362200353,1.30309567482861,0.824850614862677,1.32745138339963,0.971122544619926,0.302323556964751,1.50884063804718,0.885905678642318,0.307435147943927,1.29214146584111,1.45413491791002,0,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,0.517434735131018,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,0.23467170806371,0,0.882113592219848,0.49465875882444,1.45317984026315,0.663442174209714,0.716234064018819,0.328281799490123,1.45740418314925,0.741701208042039,1.70870880797853,1.44470807574256,0.925972636848558,1.88368457004691,2.32380187125743,0.915112692826091,2.03974115992626,3.63873776041511,3.45499934511059,0.954670618015114,0.474503990371703,2.03319467126849,0.972048067396211,1.25452977608681,1.09181281873089,1.21377911746339,0.826534557253359,0.785267825952089,1.29614973291793,0,0,1.19613236835183,0.827292452285488,1.36115831840833,1.42075805825504,0.844780627453891,1.17357238645754,1.43224823328345,1.46803082195995,2.41584120826006,2.30424005006292,1.89606672376907,1.21635129174099,1.1298205288131,1.29920822977795,2.32734704367726,2.185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| |||
|short_description=p3@Pcnt | |||
}} |
Latest revision as of 07:33, 26 September 2015
Short description: | p3@Pcnt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pcnt_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENSMUST00000171940_5end |
EntrezGene: | Pcnt |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.61e-11 | 41 |
respiratory system | 6.53e-11 | 42 |
endo-epithelium | 2.55e-10 | 69 |
foregut | 1.15e-08 | 80 |
subdivision of digestive tract | 3.57e-08 | 114 |
lung | 6.02e-08 | 14 |
respiratory tube | 6.02e-08 | 14 |
respiration organ | 6.02e-08 | 14 |
pair of lungs | 6.02e-08 | 14 |
lung primordium | 6.02e-08 | 14 |
lung bud | 6.02e-08 | 14 |
digestive system | 1.16e-07 | 116 |
digestive tract | 1.16e-07 | 116 |
primitive gut | 1.16e-07 | 116 |
endoderm-derived structure | 3.55e-07 | 118 |
endoderm | 3.55e-07 | 118 |
presumptive endoderm | 3.55e-07 | 118 |
primordium | 3.92e-07 | 134 |