FFCP PHASE1:Hg19::chr2:232326697..232326708,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7667 | |||
|TSSclassifier=strong | |||
|UniProt=B3KM80 | |||
|association_with_transcript=-302bp_to_AK001314_5end | |||
|cluster_id=chr2:232326697..232326708,- | |||
|coexpression_cluster_id=C483 | |||
|description=CAGE_peak_9_at_NCL_5end | |||
|id=chr2:232326697..232326708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.26e-27!235;DOID:14566!9.40e-27!239;DOID:0050687!1.90e-14!143;DOID:305!3.22e-12!106;DOID:2531!4.78e-10!51;DOID:0060083!4.78e-10!51;DOID:0050686!1.40e-09!137;DOID:1240!2.90e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.90e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.52e-26,235;DOID:14566,8.98e-26,239;DOID:0050687,7.63e-14,143;DOID:305,2.48e-11,106;DOID:2531,1.45e-10,51;DOID:0060083,1.45e-10,51;DOID:0050686,1.02e-08,137;DOID:1240,1.10e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,1.92690471501885,0.281908808191942,1.0007329835313,1.34088328328186,2.61701557230111,0,3.79031924056099,2.87304191019822,0.737201809504527,0.697801167972428,0.655324116390517,0.791300934685361,1.36142988256051,0.994192127183747,2.6893005858071,4.82155622419182,2.19093027116212,5.36726078669558,0.61560529038394,0.816002764977012,0.313454721478088,0.85870796139317,3.28498620174922,1.63205431473244,13.0666923828997,9.76997014454354,13.4595436046392,0,0.383829398097213,0.309632246632152,1.83884244895785,0.90361775633475,1.10926203050036,3.33108962495297,3.2698923472107,0.880801318004542,0.553995408531877,6.61796676651468,1.08505435357926,0.447830948479849,0.647787332037959,0.257575567634187,1.45398238779565,1.51150377475524,1.21292030593908,0.929716147622738,1.6446715520873,1.23882548358041,1.1507695692886,1.0246428261164,0.709446689665756,1.37898272294647,1.93645405075148,0,2.44715041405386,1.36453075028923,0.898893937780338,2.14258724659632,0.320929027076094,0,0.329851300186716,1.59570926097305,0.426224750532694,2.90209238628584,1.13477044938228,0.622822248995575,2.76373531782418,3.65038042894141,1.52032191293582,1.81619850790011,1.10483290796269,0.632924774881769,0.633765858935825,0,0,0.44931452458598,0.600707571366025,0.964353520182481,0,0.79566670879636,0.182664153764634,0,1.09227722252426,0,0,0,0,0,0.954053754535364,2.84606484554724,2.34894875748376,3.05818582500183,0,0,0.263384084775077,2.360517241366,4.32311839024081,4.93443597598822,0.668745981562712,0.977766799900771,0.946895611469467,1.94826728407911,0.557052284425868,0.589211814949674,0,1.62482318259009,1.92136979588513,1.30059347559878,2.46656856905514,1.38175008892924,2.02862160014537,0.444859689486181,1.07016331235885,1.04535523804977,1.0197840842781,0.766440987203842,0,0.759059076058509,0.637130828648193,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.81446068902259,6.95344509037119,4.34473211648397,2.43806866313962,0.670700859703636,0.255725123687061,1.0843174571537,0,2.31754430337318,0.795285947051099,0,0.850813354476611,2.4390233720882,2.3715392137144,0.523916301990851,0.364295288292542,1.48313777113772,0,0.174129737299267,0.664789802594326,0.476981248610684,0.571994910780128,1.48583000531826,0.79504962946682,0,1.73570250803797,0,1.67799774483962,6.87795104850169,1.46296476575767,0.775250277507987,1.06729878806013,1.00416183829401,0,0,0.732186172644509,1.47065232138347,1.62028389576352,2.41109266367015,3.59246996201872,3.82879033643296,0,0,1.09921046358244,0,0,0.872188104285069,0,2.40597972162702,0.662045904066094,2.29469296599051,2.4826786753885,1.68203280042692,1.06748995729705,2.4666754841716,0.933633106199299,1.75123873690594,2.12500474047496,0.302714855289863,0,0.234321431833797,1.24864030732128,2.2818872861778,4.03511437489863,3.17073146338165,2.10434827678571,4.3539750077697,1.42907919878425,4.91337269247072,3.40975077880026,0,1.7308685049499,0.910161361938026,0,1.85169725349473,8.00758527180571,0.277064115484183,1.31693286264251,1.22595118319608,0.751190294532984,1.92834711372036,4.30535125653269,2.34913127700424,2.11931901159562,0.900273288253207,1.33968288009971,3.34932702059318,0.930584281657949,1.5189869901714,1.16924406193438,1.51460264546469,0.552299391853796,1.45481451136931,0.355009592516614,0.806016785821122,3.56077243852024,0.966304265816484,1.09098448236334,0,4.14710600840624,4.37348235460901,3.71820617182459,3.62813692553797,5.55105871926382,3.6497735907583,0,2.57296375277154,0,4.17931135228781,0.721879481669586,5.79703320195235,4.55178663210875,9.15841913557232,5.18381671842252,3.05031221729369,7.1181185733329,4.44943316928543,6.08286541888573,4.61696588335668,0,0,0.4115740113314,0,3.80265104465493,2.94848165003288,4.13552934676983,1.7658523976586,1.10689594688802,2.57351715447788,2.52425656439839,1.1240175325762,4.82539067575828,2.96283024507295,0.651616610620649,0,4.3299402607582,0.231860809950154,0.587043471179108,1.01056513432752,1.38895653772983,4.37584550139576,0.790204397959275,0.858486162094873,0,0.234004265139238,1.0404181360211,0.93733833986777,2.01578553838631,2.55195175036296,2.23896306757121,4.06887513919547,1.15014803749563,4.43396914106349,0.528290604079356,0.621984346622316,0.864719720501769,0.25248486685276,1.14296209725904,0.381988425558278,0,0,2.05654985406647,0.901029173531752,1.71495859578347,0.112131084345361,0.87192013766656,3.15354629030085,0.775630294546667,0,5.071816515336,0.797814349754612,0,0.514414748524284,1.41849132023278,1.0656887160644,2.57360388584666,1.62786481617433,2.46972101034231,0.977208552881205,0.355391948742546,2.37585561880029,0.301439377059586,0,3.69900067373611,1.2162378064119,1.00451418286425,2.10833939483032,1.4377491329495,2.29723871668228,1.42636905040718,0.868687840005475,3.08214483825575,1.07436577943937,5.04383147970873,3.34952292343276,3.66566877261179,4.36366323351144,1.01637849688985,2.60279707715243,4.63973287666617,0.335032530668698,5.74144876487847,0.749007023947182,0,0,2.4538298343828,1.00034104211935,0.813795071099207,3.11956292296211,4.63915370872621,2.99634588564476,1.99140405487612,0.601892199455438,0,0,1.32845119707087,0.553107505625109,2.25897397617015,0.587403472388222,0.343143423810856,1.03384013061444,2.15714200818617,1.921096040462,0.303127571446259,1.66435439510497,1.81434175997808,1.24053903909388,0.306923946576125,1.96462066103151,0.640695746278505,1.02341449813341,1.44768529029247,0,6.01417805830357,1.77561725313127,2.05317890034523,5.71179872101983,1.74315567689939,3.86750238693191,3.20810352485256,6.72191219232043,2.29628896329214,6.73737321624853,2.22911505431021,0,1.46329140498388,0,0,1.58327443339314,0,1.19065593693561,6.26156156696204,0,0,0.501689773854853,1.52925763827023,0,0.895499018888713,1.31555925987561,0.522870902049801,0.769350375349168,0.328014645699706,2.92840555197873,1.23649213977267,8.05811290401422,2.39277549769705,1.14853107599234,7.80072295243825,0,1.06337790121334,1.3864375540318,2.14905144616581,1.65403886981437,1.93356440762893,3.48040065394148,3.57951835147624,1.60257664164127,2.64455864577565,4.42037154939744,0.765676274967505,3.54052232994425,1.39453664789186,2.51849877464512,0,0.924100740528266,0.532306030317022,0.869932992075073,0.55597265731176,0.858749320451947,0.744316738719335,0.632758849437452,0.762520775695299,0,0.855877976067841,0.95460974377781,0,0.899362287916574,1.92175920815238,1.53156123049392,0.404364963146632,0,1.68503382495592,0.975267478179181,2.43713489631284,1.05650146756755,0.818999468447914,2.82810863907426,1.13008116620243,0.551365343546124,2.65375590096488,0,0,1.31178950409327,0.405820753925408,0.30982349809975,0.281695602532241,1.72093622644862,0.491245205065606,0.7133421029625,1.06428319221179,0.422215270595328,1.31717957183961,1.13841952129715,1.04980416073495,0.577332676353072,0,0,1.22386941009813,0.43050537267123,0,0,0.689170200620878,0,1.52927441428475,0,0.238231775457789,0,0.648473311192717,0,2.37937552888281,3.95249063171651,1.92495971052672,6.86112604746889,12.6346159085489,2.8853842595289,2.63224820389132,4.94221445459349,18.9600402861176,0.383010740264733,3.38677732358213,1.29848776109822,4.7735520279288,5.02116293873023,23.8153441574995,0,8.12600533447696,14.1317506091256,22.1979677910152,2.55507742614196,2.74804275804612,3.6868891717015,1.78940886313933,2.33588798396672,14.0679428689469,8.90899756464776,0,5.40911356951966,6.32836739195858,2.81974010175699,1.49712432326576,1.46508179271894,2.18448939149124,1.22587722705226,3.12549761487054,1.43246690842614,0,1.22864280839693,4.97073823883149,3.51673541026282,1.22439575525196,4.94411622680279,1.26675244876796,3.18796781201712,1.65770349318689,3.52705846995986,0.920418142519393,3.20020494198781,0.933118762985422,2.60618218327248,4.65455054156584,3.06943422136123,1.08507746200627,0,0,0,1.66982576691332,0,3.64598865519327,1.92411999991631,1.44999915086959,4.77932482799099,5.08507300585533,6.14607972596635,0.689486746482929,6.70690610781485,9.0284997365312,1.77148277162768,3.13550740426061,3.05163472634166,5.19722521676756,1.77328571372128,1.31631238292384,0.762569244632931,0.83654246567162,1.30815439456455,0.341826167541004,4.15015027898508,2.33369875465408,2.49888955420619,0.31900115973192,0.183195186803725,2.13213910407454,5.10966490978682,3.1396051279005,1.99454018280188,4.96310453357798,3.33306308340157,4.19553967439607,2.27704479269022,0.953619473882272,3.16497096792041,1.30586246527318,0.706765357169704,3.02944095638928,0,0.265372693510018,1.22206028986725,1.48260564340311,1.97702302314405,1.8795950910982,1.07841812769083,0,3.51396668588009,21.8945747058799,1.17398771359254,5.09838797021595,2.36750641709634,1.20990716048664,1.83643656978294,1.76922422959766,0.300646838828985,1.14057010536972,7.31119259977904,3.30991955875499,5.02292669451561,4.77889719091835,0.853828638089378,2.21879476821022,7.98374796341602,1.56787835863004,2.69883540399248,1.22308667769421,3.26773461696071,7.35348117797047,6.5780385377567,6.56923656425674,0.581934098930517,2.47117154736201,4.74559555639118,3.42604811616877,5.16657990427773,0.823040347426423,3.12882212375685,1.28254112402454,1.06726497369676,4.59562102038899,3.74635084600676,1.71804894248874,8.2365598973743,3.60136994970374,2.48505071130865,2.59263438078475,2.03856309110421,2.71967400412066,2.44795722327172,0.577901179803038,0.600420288709789,3.9702559878678,0,1.28929632425987,8.93817004549669,1.95497680890578,3.20824593616357,0.717873024576814,4.3929380109778,2.14613024068285,0.446342914883745,1.07493555978762,0.360299883542404,8.15471646692177,12.8416587160775,17.9666571270943,18.603378103755,1.57483970423598,6.94321322939433,0.795229689809303,5.17572943223987,4.98334760241559,6.87697182986169,7.89336642255452,1.1248694577575,0,0.668245123238271,3.01891218839339,0.788057072991982,0.524545881349981,1.5840050477911,1.79287339332845,1.91915197319445,2.1440859791201,1.32418394073086,4.83110221544025,1.08599920350743,0.864221491201268,3.26587360109409,1.19730191562487,7.30623434669117,2.04465626142506,1.13312091520126,1.75862680413699,0,4.13705460356962,3.04134984008187,0.684347351537318,0.704815022316672,0.747511887973863,1.25763444079733,2.07119527673598,4.46549419630756,2.56895121467328,3.77557054980777,3.19170628885091,0,0.7520696820681,0.306345576763462,0.327872630709804,2.35581144375351,1.77213635993397,7.32157589411779,4.13130071331449,1.72022758707021,3.66065870071613,0.558867626472451,19.2304602561361,3.37447101497688,1.36484205787483,5.13837600380941,3.2937214757744,7.02502358710322,1.30428925749743,2.83584125485061,1.40227985908335,1.10961172300523,1.51522404220071,1.0062716070103,1.77962244319307,0.457680136793847,0.907385542579434,1.86524640699337,0.73927574994817,1.59296767163702,1.34940933649081,1.08684069813382,3.7323558705677,1.59505028734797,0.521745061811734,1.05180326298053,1.90402606084398,4.47557806525128,0.727394636810238,1.93339002676479,0.464033759878494,3.98095888698616,6.40044423461046,1.03018711554838,0.336749488765919,0,0.963099152036517,1.50109113962448,4.17590867144339,5.44094221229454,3.47283711485751,9.0552580667393,7.70082016650396,3.70561736593167,2.41212454536578,4.59391779459291,10.4173580666294,3.7167336943676,6.91852100187456,4.83602478423678,6.68491903590241,3.31820246764154,0.974301544196942,0.265729680626726,0.817826971279221,1.31043939538565,1.47463745252232,1.47918486351039,1.39991177098451,2.13383459388282,1.89436477626897,6.2426754892352,1.28874165176289,0.139879507719444,0.622077260032973,2.04630994085843,1.29389773676018,3.77438260454151,8.95519033174514,2.88545300921843,9.77844632467741,5.32923786313709,0.558644917973244,0.318004350653419,2.99674631004763,0,1.41070377476274,2.1437183414724,1.09189682663981,0,2.55414174491442,1.8460472781668,0.504143392443436,0.622415272177961,4.52131807769183,2.85538840518309,1.57036349601641,0.707818340086442,10.8222873127791,5.54523197521623,0.381382095467167,2.0710797781803,1.39241355481392,1.0529445968896,1.41193548092464,3.90757005616546,3.66669372273991,9.17122738056542,1.03499260351932,0.87798860003913,1.56215619722769,3.30698874401895,0.253663240775627,2.7348740450911,0.548257766857182,6.45074531906083,8.96943346234065,3.96063525682745,0.535701835878287,3.02655349996942,0.606965604236632,3.41493287026946,1.24183318227694,5.18552944001007,0.685952037749674,1.2914249265598,0.72350050919134,2.71845834033127,4.44925607568277,0.470958557103084,4.87058328739606,2.80272163313789,2.73947616152849,0.431855182437243,1.43325506366115,0.500335809236594,4.58239474024907,5.69582984303814,4.52031507986707,2.40513409419076,5.38762026823896,6.99945756085195,2.07377898544228,0,1.06498800657509,1.27820107138737,3.38709640152743,4.1239236337929,0.62041277132864,0.955538938977433,5.14534986269845,1.07965256976767,2.19452264968085,3.88457302312737,0.821302454849976,3.4794432940146,1.45713297917742,0.701818390386317,16.1150127880708,1.18920090777569,2.823652050974,10.8841111577975,3.92503393273351,1.00326405540328,5.90110813360685,4.23285566725371,2.69663153929296,1.17838273550813,4.3187862765288,2.97046400327086,1.2679671827502,0.509781344063451,1.12780701575824,0.45120521581504,4.29746970477194,1.78553938605658,1.76447435857846,2.80844783412089,0.730336388246517,2.75237570042724,3.58348957878628,3.94428905482962,0.611923411718232,1.74540276136151,6.34832208618481,4.09194519983426,3.69740502905135,3.8936390591141,3.78499274505237,7.86712118138608,3.67425652933167,2.95767606251747,2.13773924212448,5.329904173021,16.045282514712,1.06090177505535,4.01946195234268,1.65833887891756,3.82702084689012,1.70587185520785,1.66645102024618,1.67931165573616,1.11734485732544,3.25182401483779,0.445530107947154,2.02117188958219,5.660635445321,1.36893320434112,0.5388164241167,1.2192774916755,2.99394320891412,0.732629417498771,6.51036809854064,0,2.0659796484515,4.69281884806909,0.366724332548599,3.25516942652591,0.665756774185513,2.61655931668334,6.09080135376143 | |||
|short_description=p9@NCL | |||
}} |
Latest revision as of 19:38, 15 September 2015
Short description: | p9@NCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NCL_5end |
Coexpression cluster: | C483_acute_diffuse_medulloblastoma_hepatocellular_small_mesothelioma_testicular |
Association with transcript: | -302bp_to_AK001314_5end |
EntrezGene: | NCL |
HGNC: | 7667 |
UniProt: | B3KM80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 1.52e-26 | 235 |
disease of cellular proliferation | 8.98e-26 | 239 |
cell type cancer | 7.63e-14 | 143 |
carcinoma | 2.48e-11 | 106 |
hematologic cancer | 1.45e-10 | 51 |
immune system cancer | 1.45e-10 | 51 |
organ system cancer | 1.02e-08 | 137 |
leukemia | 1.10e-08 | 39 |