FFCP PHASE1:Hg19::chr2:228246460..228246471,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26230 | |||
|TSSclassifier=strong | |||
|UniProt=C9JES4 | |||
|association_with_transcript=239bp_to_ENST00000449706_5end | |||
|cluster_id=chr2:228246460..228246471,- | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_4_at_TM4SF20_5end | |||
|id=chr2:228246460..228246471,- | |||
|ontology_enrichment_celltype=CL:0000197!8.37e-22!6;CL:0000098!8.37e-22!6;CL:0002167!8.37e-22!6;CL:0000057!7.91e-15!75;CL:0002620!1.94e-11!23;CL:0002579!3.99e-11!3;CL:0002561!2.60e-09!1;CL:0002574!6.72e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000197;8.76e-88;6!CL:0000098;8.76e-88;6!CL:0002167;8.76e-88;6!CL:0000710;5.93e-27;20!CL:0000075;3.71e-20;27!CL:0002077;1.85e-14;34!CL:0002556;9.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.76e-88,6;CL:0000098,8.76e-88,6;CL:0002167,8.76e-88,6;CL:0000710,5.93e-27,20;CL:0000075,3.71e-20,27;CL:0002077,3.79e-16,34;CL:0000133,2.94e-09,59;CL:0000221,1.02e-07,72;CL:0002556,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.04e-14!5;DOID:450!3.04e-14!5;DOID:66!3.04e-14!5;DOID:423!3.04e-14!5;DOID:0080000!3.04e-14!5;DOID:11722!3.04e-14!5;DOID:2513!2.04e-09!1;DOID:4235!7.27e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:2513;5.05e-34;1!DOID:3451;9.07e-18;2!DOID:4159;9.07e-18;2!DOID:0060122;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.05e-34,1;DOID:3451,9.07e-18,2;DOID:4159,9.07e-18,2;DOID:0060122,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.49e-13!95;UBERON:0002097!3.12e-11!40;UBERON:0002199!7.27e-10!45;UBERON:0002416!7.27e-10!45;UBERON:0005933!2.60e-09!1;UBERON:0005942!2.60e-09!1;UBERON:0005932!2.60e-09!1;UBERON:0005705!3.31e-09!1;UBERON:0008193!3.31e-09!1;UBERON:0002514!3.31e-09!1;UBERON:0003462!3.31e-09!1;UBERON:0008001!3.31e-09!1;UBERON:0007914!3.31e-09!1;UBERON:0003457!3.31e-09!1;UBERON:0009292!3.31e-09!1;UBERON:0007375!3.31e-09!1;UBERON:0003323!3.31e-09!1;UBERON:0002397!3.31e-09!1;UBERON:0001709!3.31e-09!1;UBERON:0004066!3.31e-09!1;UBERON:0002244!3.31e-09!1;UBERON:0005620!3.31e-09!1;UBERON:0004068!3.31e-09!1;UBERON:0004362!3.31e-09!1;UBERON:0003129!5.20e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;1.44e-09;4!UBERON:0001758;9.49e-07;6!UBERON:0003672;9.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.44e-09,4;UBERON:0001758,9.49e-07,6;UBERON:0003672,9.49e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,1.22595118319608,0.751190294532984,0,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.552299391853796,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70362119990049,10.5273103390325,14.9817294282238,7.9656162195045,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@TM4SF20 | |||
}} |
Latest revision as of 03:59, 25 September 2015
Short description: | p4@TM4SF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TM4SF20_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 239bp_to_ENST00000449706_5end |
EntrezGene: | TM4SF20 |
HGNC: | 26230 |
UniProt: | C9JES4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.76e-88 | 6 |
sensory epithelial cell | 8.76e-88 | 6 |
olfactory epithelial cell | 8.76e-88 | 6 |
neurecto-epithelial cell | 5.93e-27 | 20 |
columnar/cuboidal epithelial cell | 3.71e-20 | 27 |
ecto-epithelial cell | 3.79e-16 | 34 |
neurectodermal cell | 2.94e-09 | 59 |
ectodermal cell | 1.02e-07 | 72 |
fibroblast of periodontium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.44e-09 | 4 |
periodontium | 9.49e-07 | 6 |
dentition | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.05e-34 | 1 |
skin carcinoma | 9.07e-18 | 2 |
skin cancer | 9.07e-18 | 2 |
integumentary system cancer | 9.07e-18 | 2 |