FFCP PHASE1:Hg19::chr2:223288764..223288802,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |||
|association_with_transcript=-433bp_to_ENST00000321276_5end | |||
|cluster_id=chr2:223288764..223288802,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_SGPP2_5end | |||
|id=chr2:223288764..223288802,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.84e-25!42;CL:0000860!2.51e-22!45;CL:0002009!5.49e-22!65;CL:0002194!8.49e-22!63;CL:0000576!8.49e-22!63;CL:0000040!8.49e-22!63;CL:0000559!8.49e-22!63;CL:0000557!4.60e-20!71;CL:0000839!2.28e-19!70;CL:0000766!6.23e-18!76;CL:0002087!1.65e-14!119;CL:0000738!1.68e-13!140;CL:0002031!4.92e-13!124;CL:0000988!4.64e-09!182;CL:0000763!6.55e-09!112;CL:0000049!6.55e-09!112;CL:0000037!3.51e-08!172;CL:0000566!3.51e-08!172;CL:0002032!6.10e-07!165;CL:0000837!6.10e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-65;33!CL:0002057;3.40e-65;33!CL:0000473;2.82e-48;39!CL:0000234;2.82e-48;39!CL:0000576;3.08e-37;48!CL:0000766;5.40e-24;69!CL:0002087;3.34e-12;104!CL:0000763;6.21e-10;100!CL:0002393;2.04e-08;6!CL:0002397;2.04e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.17e-72,42;CL:0002057,9.17e-72,42;CL:0000473,3.47e-67,48;CL:0000234,3.47e-67,48;CL:0002194,1.36e-52,59;CL:0000576,1.36e-52,59;CL:0000040,1.36e-52,59;CL:0000559,1.36e-52,59;CL:0002009,1.04e-50,61;CL:0000839,1.72e-46,66;CL:0000557,1.01e-45,67;CL:0000766,3.42e-42,72;CL:0002087,1.48e-26,115;CL:0000763,2.47e-26,108;CL:0000049,2.47e-26,108;CL:0002031,3.82e-23,120;CL:0000738,1.45e-21,136;CL:0000988,5.13e-18,177;CL:0000037,2.38e-16,168;CL:0002032,8.10e-16,161;CL:0000837,8.10e-16,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.68e-51;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.54e-17!102;UBERON:0003061!4.54e-17!102;UBERON:0002193!1.51e-16!112;UBERON:0002371!2.48e-16!80;UBERON:0001474!2.63e-14!86;UBERON:0002405!4.10e-12!115;UBERON:0004765!2.13e-10!101;UBERON:0001434!2.13e-10!101;UBERON:0001049!5.35e-10!57;UBERON:0005068!5.35e-10!57;UBERON:0006241!5.35e-10!57;UBERON:0007135!5.35e-10!57;UBERON:0002020!8.35e-09!34;UBERON:0003528!8.35e-09!34;UBERON:0000062!9.81e-09!511;UBERON:0001893!1.49e-08!34;UBERON:0002791!4.41e-08!33;UBERON:0003075!8.66e-08!86;UBERON:0007284!8.66e-08!86;UBERON:0002616!9.05e-08!59;UBERON:0001869!1.96e-07!32;UBERON:0000923!2.71e-07!604;UBERON:0005291!2.71e-07!604;UBERON:0006598!2.71e-07!604;UBERON:0002532!2.71e-07!604;UBERON:0002050!3.17e-07!605;UBERON:0005423!3.17e-07!605;UBERON:0002780!3.49e-07!41;UBERON:0001890!3.49e-07!41;UBERON:0006240!3.49e-07!41;UBERON:0002346!4.64e-07!90;UBERON:0000489!5.76e-07!32;UBERON:0003080!6.82e-07!42;UBERON:0007023!8.48e-07!115;UBERON:0000922!9.38e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-39,76;UBERON:0001474,2.08e-36,82;UBERON:0002390,9.70e-35,98;UBERON:0003061,9.70e-35,98;UBERON:0004765,1.07e-32,90;UBERON:0002405,1.82e-31,93;UBERON:0002193,5.47e-31,108;UBERON:0001434,7.00e-29,100;UBERON:0002204,4.78e-15,167;UBERON:0003081,6.44e-15,203;UBERON:0000926,2.00e-07,315;UBERON:0004120,2.00e-07,315;UBERON:0006603,2.00e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,13.2958898047651,9.82667792603694,10.6335326650767,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0.242584061187816,4.18372266430232,5.75635043230556,8.3620720141678,3.74000110018796,1.7931249457037,4.02019790810595,11.721353145045,12.2642089880927,16.251178391321,0.941211697713023,1.91034305040492,2.47195832889593,14.6920268338033,12.5162320559677,20.4587880255693,0.329851300186716,0,0,43.8215950329162,40.8517361777621,52.3170689156283,1.25624332628372,0,1.3031330682307,33.9023721474687,34.2498201468435,33.8614754561746,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96813700770458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,1.35359883872224,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,0.246169610922139,0,0,1.25314822272926,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,1.18608451472249,0.247127877893006,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,2.1045278718029,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,0,0.240476460754601,0,0.19980960958213,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.544813624446302,0,0,0,0.2249738915515,0,0.121499113316049,0,0.236417121897595,1.04909176269996,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,1.06787412567695,3.61569901729232,0,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.859284456339908,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,1.2288645437686,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0.0675375846183947,0,0.413373593002368,0.253663240775627,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0.68732060563215,0.62041277132864,0,0.559277158988962,0.098150233615243,1.70685094975177,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.387533459016037,0.248298857183432,0,1.52753179867596,1.41482032270754,0.217716747896961,0,0.134704106029175,0.717222053926764,0,0.814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |||
|short_description=p7@SGPP2 | |||
}} |
Latest revision as of 23:27, 24 September 2015
Short description: | p7@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -433bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.17e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.17e-72 | 42 |
defensive cell | 3.47e-67 | 48 |
phagocyte | 3.47e-67 | 48 |
monopoietic cell | 1.36e-52 | 59 |
monocyte | 1.36e-52 | 59 |
monoblast | 1.36e-52 | 59 |
promonocyte | 1.36e-52 | 59 |
macrophage dendritic cell progenitor | 1.04e-50 | 61 |
myeloid lineage restricted progenitor cell | 1.72e-46 | 66 |
granulocyte monocyte progenitor cell | 1.01e-45 | 67 |
myeloid leukocyte | 3.42e-42 | 72 |
nongranular leukocyte | 1.48e-26 | 115 |
myeloid cell | 2.47e-26 | 108 |
common myeloid progenitor | 2.47e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 3.82e-23 | 120 |
leukocyte | 1.45e-21 | 136 |
hematopoietic cell | 5.13e-18 | 177 |
hematopoietic stem cell | 2.38e-16 | 168 |
hematopoietic oligopotent progenitor cell | 8.10e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.10e-16 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-39 | 76 |
bone element | 2.08e-36 | 82 |
hematopoietic system | 9.70e-35 | 98 |
blood island | 9.70e-35 | 98 |
skeletal element | 1.07e-32 | 90 |
immune system | 1.82e-31 | 93 |
hemolymphoid system | 5.47e-31 | 108 |
skeletal system | 7.00e-29 | 100 |
musculoskeletal system | 4.78e-15 | 167 |
lateral plate mesoderm | 6.44e-15 | 203 |
mesoderm | 2.00e-07 | 315 |
mesoderm-derived structure | 2.00e-07 | 315 |
presumptive mesoderm | 2.00e-07 | 315 |