FFCP PHASE1:Mm9::chr10:42621426..42621443,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:42621426..42621443,+|id=chr10:42621426..42621443,+|ontology_enrichment_celltype=CL:0002031!1.22e-13!25;CL:0000791!2.28e-13!9;CL:0000789!2.28e-13!9;CL:0002420!2.28e-13!9;CL:0002419!2.28e-13!9;CL:0000790!2.28e-13!9;CL:0000838!1.86e-12!12;CL:0000624!1.35e-11!8;CL:0000542!2.36e-11!13;CL:0000051!2.36e-11!13;CL:0000084!1.16e-10!11;CL:0000827!1.16e-10!11;CL:0000988!6.90e-10!32;CL:0002032!6.90e-10!32;CL:0000037!6.90e-10!32;CL:0000566!6.90e-10!32;CL:0000837!6.90e-10!32;CL:0000553!2.02e-09!6;CL:0000556!2.02e-09!6;CL:0000738!3.01e-08!17;CL:0002087!3.01e-08!17;CL:0000893!4.50e-08!6;CL:0002489!4.50e-08!6;CL:0000898!4.50e-08!6;CL:0000809!4.50e-08!6;CL:0000810!4.50e-08!6;CL:0000895!4.50e-08!6;CL:0000808!4.50e-08!6;CL:0000894!4.50e-08!6;CL:0000806!4.50e-08!6;CL:0000807!4.50e-08!6;CL:0000805!4.50e-08!6;CL:0002425!4.50e-08!6;CL:0002436!4.50e-08!6;CL:0002427!4.50e-08!6;CL:0002428!4.50e-08!6;CL:0002429!4.50e-08!6;CL:0002433!4.50e-08!6;CL:0002431!4.50e-08!6;CL:0002432!4.50e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,7.05e-19,6;CL:0000556,7.05e-19,6;CL:0002031,5.87e-17,25;CL:0000988,4.17e-13,32;CL:0002032,4.17e-13,32;CL:0000037,4.17e-13,32;CL:0000837,4.17e-13,32;CL:0000050,1.09e-12,9;CL:0000838,2.33e-09,12;CL:0002320,6.72e-09,46;CL:0000134,6.72e-09,46;CL:0000839,7.36e-09,13;CL:0000542,1.17e-08,13;CL:0000051,1.17e-08,13;CL:0000624,3.18e-08,8;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000219,1.82e-07,54;CL:0000791,2.29e-07,9;CL:0000789,2.29e-07,9;CL:0002420,2.29e-07,9;CL:0002419,2.29e-07,9;CL:0000790,2.29e-07,9;CL:0000763,3.11e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.27e-15!48;UBERON:0002390!1.78e-11!45;UBERON:0003061!1.78e-11!45;UBERON:0003081!7.92e-10!88;UBERON:0004177!9.05e-10!29;UBERON:0002405!1.00e-09!70;UBERON:0002465!1.83e-07!3;UBERON:0003408!3.65e-07!24;UBERON:0003887!6.67e-07!10;UBERON:0001004!7.73e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.16e-20,3;UBERON:0002193,4.01e-16,48;UBERON:0002405,4.01e-16,48;UBERON:0001962,7.85e-14,2;UBERON:0001961,7.85e-14,2;UBERON:0001744,7.85e-14,2;UBERON:0002390,4.45e-09,45;UBERON:0003061,4.45e-09,45;UBERON:0002384,6.72e-09,46;UBERON:0000029,1.56e-08,1;UBERON:0001097,1.56e-08,1;UBERON:0003968,1.56e-08,1;UBERON:0001467,1.56e-08,1;UBERON:0003199,8.96e-08,1;UBERON:0002371,3.11e-07,16|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,2.56801094896809,3.3219752919219,0.333109761815663,1.82227740650843,0,7.25562980323947,8.5010948835558,4.2438965179803,0.0850432901510698,0,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80388804400384,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0,1.36694227721025,1.83022538565218,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:42621426..42621443,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:42621426..42621443,+ | |||
|description=CAGE_peak_at_chr10:42621426..42621443,+ | |||
|id=chr10:42621426..42621443,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.22e-13!25;CL:0000791!2.28e-13!9;CL:0000789!2.28e-13!9;CL:0002420!2.28e-13!9;CL:0002419!2.28e-13!9;CL:0000790!2.28e-13!9;CL:0000838!1.86e-12!12;CL:0000624!1.35e-11!8;CL:0000542!2.36e-11!13;CL:0000051!2.36e-11!13;CL:0000084!1.16e-10!11;CL:0000827!1.16e-10!11;CL:0000988!6.90e-10!32;CL:0002032!6.90e-10!32;CL:0000037!6.90e-10!32;CL:0000566!6.90e-10!32;CL:0000837!6.90e-10!32;CL:0000553!2.02e-09!6;CL:0000556!2.02e-09!6;CL:0000738!3.01e-08!17;CL:0002087!3.01e-08!17;CL:0000893!4.50e-08!6;CL:0002489!4.50e-08!6;CL:0000898!4.50e-08!6;CL:0000809!4.50e-08!6;CL:0000810!4.50e-08!6;CL:0000895!4.50e-08!6;CL:0000808!4.50e-08!6;CL:0000894!4.50e-08!6;CL:0000806!4.50e-08!6;CL:0000807!4.50e-08!6;CL:0000805!4.50e-08!6;CL:0002425!4.50e-08!6;CL:0002436!4.50e-08!6;CL:0002427!4.50e-08!6;CL:0002428!4.50e-08!6;CL:0002429!4.50e-08!6;CL:0002433!4.50e-08!6;CL:0002431!4.50e-08!6;CL:0002432!4.50e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.05e-19,6;CL:0000556,7.05e-19,6;CL:0002031,5.87e-17,25;CL:0000988,4.17e-13,32;CL:0002032,4.17e-13,32;CL:0000037,4.17e-13,32;CL:0000837,4.17e-13,32;CL:0000050,1.09e-12,9;CL:0000838,2.33e-09,12;CL:0002320,6.72e-09,46;CL:0000134,6.72e-09,46;CL:0000839,7.36e-09,13;CL:0000542,1.17e-08,13;CL:0000051,1.17e-08,13;CL:0000624,3.18e-08,8;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000219,1.82e-07,54;CL:0000791,2.29e-07,9;CL:0000789,2.29e-07,9;CL:0002420,2.29e-07,9;CL:0002419,2.29e-07,9;CL:0000790,2.29e-07,9;CL:0000763,3.11e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.27e-15!48;UBERON:0002390!1.78e-11!45;UBERON:0003061!1.78e-11!45;UBERON:0003081!7.92e-10!88;UBERON:0004177!9.05e-10!29;UBERON:0002405!1.00e-09!70;UBERON:0002465!1.83e-07!3;UBERON:0003408!3.65e-07!24;UBERON:0003887!6.67e-07!10;UBERON:0001004!7.73e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.16e-20,3;UBERON:0002193,4.01e-16,48;UBERON:0002405,4.01e-16,48;UBERON:0001962,7.85e-14,2;UBERON:0001961,7.85e-14,2;UBERON:0001744,7.85e-14,2;UBERON:0002390,4.45e-09,45;UBERON:0003061,4.45e-09,45;UBERON:0002384,6.72e-09,46;UBERON:0000029,1.56e-08,1;UBERON:0001097,1.56e-08,1;UBERON:0003968,1.56e-08,1;UBERON:0001467,1.56e-08,1;UBERON:0003199,8.96e-08,1;UBERON:0002371,3.11e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,2.56801094896809,3.3219752919219,0.333109761815663,1.82227740650843,0,7.25562980323947,8.5010948835558,4.2438965179803,0.0850432901510698,0,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80388804400384,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0,1.36694227721025,1.83022538565218,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:42621426..42621443,+ | |||
}} |
Latest revision as of 09:39, 4 August 2015
Short description: | p@chr10:42621426..42621443, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:42621426..42621443, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.05e-19 | 6 |
megakaryocyte | 7.05e-19 | 6 |
hematopoietic lineage restricted progenitor cell | 5.87e-17 | 25 |
hematopoietic cell | 4.17e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.17e-13 | 32 |
hematopoietic stem cell | 4.17e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.17e-13 | 32 |
megakaryocyte-erythroid progenitor cell | 1.09e-12 | 9 |
lymphoid lineage restricted progenitor cell | 2.33e-09 | 12 |
connective tissue cell | 6.72e-09 | 46 |
mesenchymal cell | 6.72e-09 | 46 |
myeloid lineage restricted progenitor cell | 7.36e-09 | 13 |
lymphocyte | 1.17e-08 | 13 |
common lymphoid progenitor | 1.17e-08 | 13 |
CD4-positive, alpha-beta T cell | 3.18e-08 | 8 |
lymphocyte of B lineage | 3.50e-08 | 1 |
B cell | 3.50e-08 | 1 |
pro-B cell | 3.50e-08 | 1 |
motile cell | 1.82e-07 | 54 |
mature alpha-beta T cell | 2.29e-07 | 9 |
alpha-beta T cell | 2.29e-07 | 9 |
immature T cell | 2.29e-07 | 9 |
mature T cell | 2.29e-07 | 9 |
immature alpha-beta T cell | 2.29e-07 | 9 |
myeloid cell | 3.11e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.16e-20 | 3 |
hemolymphoid system | 4.01e-16 | 48 |
immune system | 4.01e-16 | 48 |
gut-associated lymphoid tissue | 7.85e-14 | 2 |
mucosa-associated lymphoid tissue | 7.85e-14 | 2 |
lymphoid tissue | 7.85e-14 | 2 |
hematopoietic system | 4.45e-09 | 45 |
blood island | 4.45e-09 | 45 |
connective tissue | 6.72e-09 | 46 |
lymph node | 1.56e-08 | 1 |
axillary lymph node | 1.56e-08 | 1 |
peripheral lymph node | 1.56e-08 | 1 |
shoulder | 1.56e-08 | 1 |
egg chamber | 8.96e-08 | 1 |
bone marrow | 3.11e-07 | 16 |