FFCP PHASE1:Mm9::chr10:42198205..42198249,-: Difference between revisions
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{{FFCP|EntrezGene=215951|HGNC=|MCL_coexpression_id=79|UniProt=E9Q4K2|association_with_transcript=0bp_to_ENSMUST00000133326_5end|description=CAGE_peak_1_at_Lace1_5end|id=chr10:42198205..42198249,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.30e-10!43;UBERON:0005409!7.48e-10!59;UBERON:0001007!2.55e-08!128;UBERON:0001555!2.55e-08!128;UBERON:0007026!2.55e-08!128;UBERON:0004921!3.27e-08!126;UBERON:0004185!3.27e-08!126;UBERON:0004119!4.86e-08!130;UBERON:0000925!4.86e-08!130;UBERON:0006595!4.86e-08!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.19e-10,31;UBERON:0005409,8.36e-09,47;UBERON:0001007,5.42e-07,116;UBERON:0001555,5.42e-07,116;UBERON:0007026,5.42e-07,116;UBERON:0004921,6.75e-07,114;UBERON:0004119,9.92e-07,118;UBERON:0000925,9.92e-07,118;UBERON:0006595,9.92e-07,118|phase1_expression=2.5623815536767,16.0528687514106,16.8349718574128,20.8700305801713,27.0483694171027,15.1091344720701,11.6806320297763,8.39301602370246,1.97104211012333,1.63845168425395,3.5955773327356,3.82906363177615,9.41604014621631,8.65461983948074,11.3257319017325,6.88415909125408,3.49780939064073,15.1421839371954,18.373334103169,14.004858509335,11.3958008802433,7.24823943766463,8.35839325244593,12.7993938234725,8.48814339948529,6.89078356938024,13.7843838770904,13.574687659211,19.0023419456374,20.1624103807945,11.7517170647311,8.89042942843484,12.3012957516914,0,20.2196133825892,15.7922913090568,18.3752420636132,4.18531630736908,4.6880120671428,3.66466620781659,2.35292595212406,4.09827290975067,1.94204141212461,10.9530231638752,6.89363132292699,7.52541683862894,2.34717403304412,2.8343270329458,3.07560655828261,2.91644848611425,4.05960622713551,2.87505128729943,12.2481302422148,11.6057942721815,9.41062637598899,3.8588915405392,6.5902691185914,6.70373719960675,3.23706337375356,5.81890077199236,1.26766280701236,2.71075625655306,1.77858959222228,4.94944844504769,4.94433181283487,4.2628806896766,2.99600110518405,2.30530983192933,1.97010263386108,1.75507719831198,1.89292465216244,4.57041575046086,8.39300455616131,1.95985278743926,2.20444583341944,1.83843757322004,12.1127469099328,11.7472351038373,8.44835932909339,3.42904348098504,2.10421580285542,1.56274011167028,12.0048689570594,12.9435400307286,8.40390362772456,8.83885756421003,6.40672563595963,4.28718725398191,5.45228591998925,5.06329452715463,28.9864488701678,18.0689014166091,2.03991400112325,13.4925797909454,19.4932925234301,14.7848872742121,16.7128859956785,9.03280709663706,9.87186817490901,6.71345191569646,4.08445917352373,15.3991772897181,28.028576367731,21.3320010945999,6.71122227134764,7.34743609877786,9.0994400102661,15.0722721229159,20.1971549244794,16.92240385339,6.24547176358089,8.22056791442781,7.84092690670599,9.04335843315735,9.64227398512779,20.9863207520558,20.2699873542187,33.5470508054195,5.30766331169925,9.86777784679196,12.8088080707028,12.6067565815158,13.0474232852686,9.07620470735796,12.1479089951804,13.5392239260553,3.23500836165985,3.59941638596045,3.43089613097275,9.58660092190865,16.0125210986519,1.88481528169297,8.16974304903699,6.39288643325826,7.68815764870372,6.48965052271031,6.21220119486929,9.45492976636707,8.33985102831127,19.1502088856691,3.3831315170303,4.36813998423599,1.80062129805349,3.91832526372859,4.28629944653366,6.27757229395764,5.24729657534481,13.1938719076898,3.01795190105979,6.05139456537022,4.92663147659057,4.82230611340665,6.67313398141435,6.96504333044333,8.43706759272568,8.55847347319521,3.51106593656617,1.28673953557358,2.84163499395593,6.62802472113606,10.0846205791871,13.1445304866541,15.1516630774535,16.5281954667819,20.6717931269087,26.9739375910473,28.4369805483596,24.6374872394728,34.8866881816579,40.3851961634574,44.6689140597665,53.3629954102463,50.7160766322327,46.3012144723283,4.6263788684108,2.77842453424068,24.4509899408011,20.3626936330929,5.33220626338085,6.73486348395272,9.27845721519072,13.5127961497639,14.4545728499166,18.8323369851434,18.9811624617805,17.2933902460211,22.8715040008245,17.5081695396213,18.9115164505547,14.3811105384675,15.1296634912286,19.9141273254367,2.84501851429623,5.1411830674378,11.270773567308,8.96065842519383,9.69762435838129,9.18779240563173,14.0385112415851,24.503284564614,26.5327850051923,29.7387165051539,10.9687472022245,5.17219827719892,3.93117990226406,3.14806957338795,4.86864291332407,4.58236603529592,4.83789118384698,5.4662266115654,4.86405680325106,9.88421087477093,10.0637744569148,14.1413560114031,13.4176199439261,14.6495749209325,13.8136008411872,20.2626278972614,14.5955020231618,6.44270800019648,7.17045896344914,7.1292936025579,7.74477819352057,12.3954630506944,14.5206620940468,13.0739544064725,13.24135210492,11.0732344824387,14.1914744105164,18.0249646187312,18.6499780415167,15.9113964439663,7.53956419696361,8.70249094109935,13.277635371514,21.2471294654644,6.58257418949947,8.79087649441524,3.60656879828686,18.6828486131236,5.67914794949262,7.41833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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215951 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4K2 | |||
|association_with_transcript=0bp_to_ENSMUST00000133326_5end | |||
|cluster_id=chr10:42198205..42198249,- | |||
|description=CAGE_peak_1_at_Lace1_5end | |||
|id=chr10:42198205..42198249,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.30e-10!43;UBERON:0005409!7.48e-10!59;UBERON:0001007!2.55e-08!128;UBERON:0001555!2.55e-08!128;UBERON:0007026!2.55e-08!128;UBERON:0004921!3.27e-08!126;UBERON:0004185!3.27e-08!126;UBERON:0004119!4.86e-08!130;UBERON:0000925!4.86e-08!130;UBERON:0006595!4.86e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.19e-10,31;UBERON:0005409,8.36e-09,47;UBERON:0001007,5.42e-07,116;UBERON:0001555,5.42e-07,116;UBERON:0007026,5.42e-07,116;UBERON:0004921,6.75e-07,114;UBERON:0004119,9.92e-07,118;UBERON:0000925,9.92e-07,118;UBERON:0006595,9.92e-07,118 | |||
|phase1_expression=2.5623815536767,16.0528687514106,16.8349718574128,20.8700305801713,27.0483694171027,15.1091344720701,11.6806320297763,8.39301602370246,1.97104211012333,1.63845168425395,3.5955773327356,3.82906363177615,9.41604014621631,8.65461983948074,11.3257319017325,6.88415909125408,3.49780939064073,15.1421839371954,18.373334103169,14.004858509335,11.3958008802433,7.24823943766463,8.35839325244593,12.7993938234725,8.48814339948529,6.89078356938024,13.7843838770904,13.574687659211,19.0023419456374,20.1624103807945,11.7517170647311,8.89042942843484,12.3012957516914,0,20.2196133825892,15.7922913090568,18.3752420636132,4.18531630736908,4.6880120671428,3.66466620781659,2.35292595212406,4.09827290975067,1.94204141212461,10.9530231638752,6.89363132292699,7.52541683862894,2.34717403304412,2.8343270329458,3.07560655828261,2.91644848611425,4.05960622713551,2.87505128729943,12.2481302422148,11.6057942721815,9.41062637598899,3.8588915405392,6.5902691185914,6.70373719960675,3.23706337375356,5.81890077199236,1.26766280701236,2.71075625655306,1.77858959222228,4.94944844504769,4.94433181283487,4.2628806896766,2.99600110518405,2.30530983192933,1.97010263386108,1.75507719831198,1.89292465216244,4.57041575046086,8.39300455616131,1.95985278743926,2.20444583341944,1.83843757322004,12.1127469099328,11.7472351038373,8.44835932909339,3.42904348098504,2.10421580285542,1.56274011167028,12.0048689570594,12.9435400307286,8.40390362772456,8.83885756421003,6.40672563595963,4.28718725398191,5.45228591998925,5.06329452715463,28.9864488701678,18.0689014166091,2.03991400112325,13.4925797909454,19.4932925234301,14.7848872742121,16.7128859956785,9.03280709663706,9.87186817490901,6.71345191569646,4.08445917352373,15.3991772897181,28.028576367731,21.3320010945999,6.71122227134764,7.34743609877786,9.0994400102661,15.0722721229159,20.1971549244794,16.92240385339,6.24547176358089,8.22056791442781,7.84092690670599,9.04335843315735,9.64227398512779,20.9863207520558,20.2699873542187,33.5470508054195,5.30766331169925,9.86777784679196,12.8088080707028,12.6067565815158,13.0474232852686,9.07620470735796,12.1479089951804,13.5392239260553,3.23500836165985,3.59941638596045,3.43089613097275,9.58660092190865,16.0125210986519,1.88481528169297,8.16974304903699,6.39288643325826,7.68815764870372,6.48965052271031,6.21220119486929,9.45492976636707,8.33985102831127,19.1502088856691,3.3831315170303,4.36813998423599,1.80062129805349,3.91832526372859,4.28629944653366,6.27757229395764,5.24729657534481,13.1938719076898,3.01795190105979,6.05139456537022,4.92663147659057,4.82230611340665,6.67313398141435,6.96504333044333,8.43706759272568,8.55847347319521,3.51106593656617,1.28673953557358,2.84163499395593,6.62802472113606,10.0846205791871,13.1445304866541,15.1516630774535,16.5281954667819,20.6717931269087,26.9739375910473,28.4369805483596,24.6374872394728,34.8866881816579,40.3851961634574,44.6689140597665,53.3629954102463,50.7160766322327,46.3012144723283,4.6263788684108,2.77842453424068,24.4509899408011,20.3626936330929,5.33220626338085,6.73486348395272,9.27845721519072,13.5127961497639,14.4545728499166,18.8323369851434,18.9811624617805,17.2933902460211,22.8715040008245,17.5081695396213,18.9115164505547,14.3811105384675,15.1296634912286,19.9141273254367,2.84501851429623,5.1411830674378,11.270773567308,8.96065842519383,9.69762435838129,9.18779240563173,14.0385112415851,24.503284564614,26.5327850051923,29.7387165051539,10.9687472022245,5.17219827719892,3.93117990226406,3.14806957338795,4.86864291332407,4.58236603529592,4.83789118384698,5.4662266115654,4.86405680325106,9.88421087477093,10.0637744569148,14.1413560114031,13.4176199439261,14.6495749209325,13.8136008411872,20.2626278972614,14.5955020231618,6.44270800019648,7.17045896344914,7.1292936025579,7.74477819352057,12.3954630506944,14.5206620940468,13.0739544064725,13.24135210492,11.0732344824387,14.1914744105164,18.0249646187312,18.6499780415167,15.9113964439663,7.53956419696361,8.70249094109935,13.277635371514,21.2471294654644,6.58257418949947,8.79087649441524,3.60656879828686,18.6828486131236,5.67914794949262,7.41833614163613,5.81643173878557,5.4962823529087,8.02075226696619,5.94460714656548,4.85772842009873,7.89090816360542,5.92931666919785,13.8168166061377,10.6455063906201,4.98583690268315,4.88660878060728,9.56826713240706,17.2568679841952,6.06951590387454,5.74414758233027,14.3339860614483,11.5167738223501,11.6825356218692,11.62927319257,11.6330793432802,16.3988794056972,13.2735438333043,14.7586052004998,12.3762651897824,6.46835250932197,5.40183282093931,2.97524972700335,2.14337035031592,3.72414490648775,8.20496560969525,6.08831376227848,4.26250928760439,7.97883807416615,5.93129798418696,9.70324951441832,16.9832840529724,9.68786560175433,9.34850336386416,8.71418111222896,10.9974402829191,12.8251568117134,9.45669040253599,5.80960994712699,7.42992724667601,9.81530995059472,6.40452753815949,9.02181902958766,10.5237959675,4.58941760983409,2.37917468950219,2.9021994498929,14.3200592702267,3.95419991976419,8.5394176193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| |||
|short_description=p1@Lace1 | |||
}} |
Latest revision as of 00:29, 26 September 2015
Short description: | p1@Lace1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lace1_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000133326_5end |
EntrezGene: | Lace1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 5.19e-10 | 31 |
gastrointestinal system | 8.36e-09 | 47 |
digestive system | 5.42e-07 | 116 |
digestive tract | 5.42e-07 | 116 |
primitive gut | 5.42e-07 | 116 |
subdivision of digestive tract | 6.75e-07 | 114 |
endoderm-derived structure | 9.92e-07 | 118 |
endoderm | 9.92e-07 | 118 |
presumptive endoderm | 9.92e-07 | 118 |