FFCP PHASE1:Hg19::chr9:137298396..137298431,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:137298396..137298431,+
|short_description=p6@RXRA
|description=CAGE_peak_6_at_RXRA_5end
|association_with_transcript=0bp_to_ENST00000540193,uc004cfc.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6256 | |EntrezGene=6256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10477 | |HGNC=10477 | ||
|TSSclassifier=strong | |||
|UniProt=B3KY83 | |UniProt=B3KY83 | ||
|association_with_transcript=0bp_to_ENST00000540193,uc004cfc.1_5end | |||
|cluster_id=chr9:137298396..137298431,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_RXRA_5end | |||
|id=chr9:137298396..137298431,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.25e-09;5!CL:0002581;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.19e-09,5;CL:0001029,2.19e-09,5;CL:0002581,3.84e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.29e-10;82!UBERON:0004874;3.40e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.50e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.19e-26!32;UBERON:0001893!6.94e-26!34;UBERON:0002791!1.54e-24!33;UBERON:0002780!1.71e-23!41;UBERON:0001890!1.71e-23!41;UBERON:0006240!1.71e-23!41;UBERON:0003080!1.03e-22!42;UBERON:0001049!4.97e-22!57;UBERON:0005068!4.97e-22!57;UBERON:0006241!4.97e-22!57;UBERON:0007135!4.97e-22!57;UBERON:0002020!7.24e-22!34;UBERON:0003528!7.24e-22!34;UBERON:0002619!6.07e-21!22;UBERON:0000956!1.44e-19!25;UBERON:0000203!1.44e-19!25;UBERON:0001017!1.82e-19!82;UBERON:0007023!2.44e-19!115;UBERON:0001950!4.53e-18!20;UBERON:0005743!5.62e-18!86;UBERON:0000955!1.55e-17!69;UBERON:0006238!1.55e-17!69;UBERON:0002616!7.51e-17!59;UBERON:0000073!4.15e-15!94;UBERON:0001016!4.15e-15!94;UBERON:0003075!8.59e-14!86;UBERON:0007284!8.59e-14!86;UBERON:0002346!1.72e-13!90;UBERON:0003056!7.52e-13!61;UBERON:0000200!1.60e-10!6;UBERON:0000349!2.91e-09!5;UBERON:0000033!5.63e-09!123;UBERON:0000153!9.90e-09!129;UBERON:0007811!9.90e-09!129;UBERON:0002420!2.16e-08!9;UBERON:0007245!2.16e-08!9;UBERON:0010009!2.16e-08!9;UBERON:0010011!2.16e-08!9;UBERON:0000454!2.16e-08!9;UBERON:0001871!1.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.69e-84;22!UBERON:0000956;8.54e-74;25!UBERON:0000203;8.54e-74;25!UBERON:0001950;2.93e-72;20!UBERON:0001869;3.62e-69;32!UBERON:0001893;1.44e-62;34!UBERON:0002791;6.57e-62;32!UBERON:0003528;4.58e-59;34!UBERON:0002020;4.58e-59;34!UBERON:0002780;5.12e-42;41!UBERON:0001890;5.12e-42;41!UBERON:0000200;1.38e-36;6!UBERON:0000349;1.16e-31;5!UBERON:0000073;1.32e-25;53!UBERON:0002616;1.32e-25;53!UBERON:0001871;2.13e-22;6!UBERON:0000955;1.20e-21;68!UBERON:0001017;3.15e-20;75!UBERON:0001872;3.53e-20;5!UBERON:0001870;3.41e-19;3!UBERON:0001954;6.65e-14;2!UBERON:0003022;6.65e-14;2!UBERON:0002421;6.65e-14;2!UBERON:0002600;6.65e-14;2!UBERON:0001876;9.42e-14;2!UBERON:0001016;1.40e-13;83!UBERON:0002771;2.19e-13;2!UBERON:0002702;2.19e-13;2!UBERON:0002021;1.55e-11;5!UBERON:0002420;3.22e-11;9!UBERON:0007245;3.22e-11;9!UBERON:0010009;3.22e-11;9!UBERON:0010011;3.22e-11;9!UBERON:0000454;3.22e-11;9!UBERON:0007023;4.09e-09;114!UBERON:0011216;3.41e-08;132!UBERON:0002022;8.53e-08;1!UBERON:0002581;1.56e-07;1!UBERON:0002902;1.56e-07;1!UBERON:0001882;1.56e-07;1!UBERON:0003112;1.56e-07;1!UBERON:0011158;1.56e-07;1!UBERON:0009899;1.56e-07;1!UBERON:0007190;1.56e-07;1!UBERON:0003128;1.56e-07;1!UBERON:0005403;1.56e-07;1!UBERON:0001703;1.56e-07;1!UBERON:0002241;1.56e-07;1!UBERON:0000989;3.40e-07;1!UBERON:0008811;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.67e-84,22;UBERON:0001869,1.41e-78,32;UBERON:0000956,5.03e-74,25;UBERON:0000203,5.03e-74,25;UBERON:0001893,7.64e-74,34;UBERON:0001950,1.56e-72,20;UBERON:0002791,4.06e-71,32;UBERON:0003528,8.05e-67,34;UBERON:0002020,8.05e-67,34;UBERON:0002780,7.97e-61,41;UBERON:0001890,7.97e-61,41;UBERON:0003080,7.97e-61,41;UBERON:0006240,7.97e-61,41;UBERON:0000073,2.36e-46,53;UBERON:0002616,2.36e-46,53;UBERON:0000955,3.79e-46,68;UBERON:0006238,3.79e-46,68;UBERON:0001049,1.10e-43,56;UBERON:0005068,1.10e-43,56;UBERON:0006241,1.10e-43,56;UBERON:0007135,1.10e-43,56;UBERON:0001017,1.36e-41,81;UBERON:0003056,8.19e-40,61;UBERON:0001016,4.83e-37,89;UBERON:0000200,1.15e-36,6;UBERON:0000349,1.03e-31,5;UBERON:0007023,7.12e-29,114;UBERON:0003075,1.22e-28,82;UBERON:0007284,1.22e-28,82;UBERON:0002346,4.03e-27,86;UBERON:0001871,1.53e-22,6;UBERON:0010371,1.01e-21,104;UBERON:0001872,2.70e-20,5;UBERON:0001870,2.93e-19,3;UBERON:0010314,4.85e-18,132;UBERON:0004121,3.12e-17,171;UBERON:0000924,3.12e-17,171;UBERON:0006601,3.12e-17,171;UBERON:0001876,7.10e-14,2;UBERON:0001954,7.10e-14,2;UBERON:0003022,7.10e-14,2;UBERON:0002421,7.10e-14,2;UBERON:0002600,7.10e-14,2;UBERON:0002771,2.20e-13,2;UBERON:0002702,2.20e-13,2;UBERON:0011216,2.76e-13,223;UBERON:0002021,1.50e-11,5;UBERON:0002420,3.31e-11,9;UBERON:0007245,3.31e-11,9;UBERON:0010009,3.31e-11,9;UBERON:0010011,3.31e-11,9;UBERON:0000454,3.31e-11,9;UBERON:0000025,7.93e-10,192;UBERON:0002022,1.03e-07,1;UBERON:0002581,1.10e-07,1;UBERON:0001882,1.72e-07,1;UBERON:0005403,1.72e-07,1;UBERON:0007190,1.83e-07,1;UBERON:0003112,2.07e-07,1;UBERON:0011158,2.07e-07,1;UBERON:0003128,2.07e-07,1;UBERON:0001703,2.07e-07,1;UBERON:0002241,2.07e-07,1;UBERON:0004761,2.07e-07,1;UBERON:0009617,2.07e-07,1;UBERON:0002902,2.21e-07,1;UBERON:0009899,2.21e-07,1;UBERON:0000989,3.62e-07,1;UBERON:0008811,3.62e-07,1;UBERON:0006258,3.62e-07,1;UBERON:0005876,3.62e-07,1;UBERON:0004874,3.62e-07,1;UBERON:0004111,5.12e-07,240 | |||
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| ||
|short_description=p6@RXRA | |||
}} | }} |
Latest revision as of 08:52, 16 September 2015
Short description: | p6@RXRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RXRA_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000540193, uc004cfc.1_5end |
EntrezGene: | RXRA |
HGNC: | 10477 |
UniProt: | B3KY83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.19e-09 | 5 |
common dendritic progenitor | 2.19e-09 | 5 |
perirenal preadipocyte | 3.84e-07 | 1 |