FFCP PHASE1:Hg19::chr2:216720351..216720357,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:216720351..216720357,+ | |||
|description=CAGE_peak_at_chr2:216720351..216720357,+ | |||
|id=chr2:216720351..216720357,+ | |||
|ontology_enrichment_celltype=CL:0002494!1.83e-14!16;CL:0002548!8.95e-14!6;CL:0002594!4.38e-12!4;CL:0002589!4.75e-11!2;CL:1000413!4.06e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.71e-19;1!CL:0002557;2.71e-19;1!CL:0002594;6.17e-19;4!CL:0002548;5.76e-13;6!CL:0002589;1.43e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002557,3.25e-19,1;CL:0002594,6.77e-19,4;CL:0002548,8.27e-13,6;CL:0002589,1.43e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1192!8.45e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:2513;2.71e-19;1!DOID:3451;2.48e-10;2!DOID:4159;2.48e-10;2!DOID:0060122;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.25e-19,1;DOID:3451,2.27e-10,2;DOID:4159,2.27e-10,2;DOID:0060122,2.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.19e-24!84;UBERON:0003914!8.10e-19!118;UBERON:0001637!1.87e-17!42;UBERON:0003509!1.87e-17!42;UBERON:0004572!1.87e-17!42;UBERON:0004535!5.91e-17!110;UBERON:0001009!2.26e-16!113;UBERON:0001981!1.93e-15!60;UBERON:0007500!1.93e-15!60;UBERON:0004537!1.93e-15!60;UBERON:0006965!1.93e-15!60;UBERON:0000055!5.35e-13!69;UBERON:0000948!3.39e-12!24;UBERON:0005498!3.39e-12!24;UBERON:0004140!3.39e-12!24;UBERON:0009881!3.39e-12!24;UBERON:0004141!3.39e-12!24;UBERON:0003084!3.39e-12!24;UBERON:0007005!3.39e-12!24;UBERON:0004139!3.39e-12!24;UBERON:0004291!3.39e-12!24;UBERON:0001310!4.38e-12!4;UBERON:0003081!8.75e-12!216;UBERON:0001529!4.75e-11!2;UBERON:0007204!4.75e-11!2;UBERON:0002049!6.08e-11!79;UBERON:0007798!6.08e-11!79;UBERON:0007100!1.06e-10!27;UBERON:0000025!2.79e-09!194;UBERON:0003915!4.06e-09!9;UBERON:0004700!4.06e-09!9;UBERON:0001917!4.06e-09!9;UBERON:0004111!3.02e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;6.17e-19;4!UBERON:0001529;1.43e-10;2!UBERON:0007204;1.43e-10;2!UBERON:0000078;2.48e-10;2!UBERON:0002012;2.48e-10;2!UBERON:0008886;2.48e-10;2!UBERON:0001637;4.69e-10;42!UBERON:0003509;4.69e-10;42!UBERON:0004572;4.69e-10;42!UBERON:0010260;5.86e-09;9!UBERON:0007500;1.31e-07;56!UBERON:0001981;1.31e-07;56!UBERON:0004537;1.31e-07;56!UBERON:0002049;9.03e-07;75!UBERON:0007798;9.03e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,6.77e-19,4;UBERON:0001637,2.03e-15,42;UBERON:0003509,2.03e-15,42;UBERON:0004572,2.03e-15,42;UBERON:0004872,1.88e-13,83;UBERON:0007500,6.08e-11,59;UBERON:0001981,6.08e-11,59;UBERON:0004537,6.08e-11,59;UBERON:0006965,6.08e-11,59;UBERON:0001529,1.43e-10,2;UBERON:0007204,1.43e-10,2;UBERON:0000078,2.72e-10,2;UBERON:0007497,2.72e-10,2;UBERON:0003643,2.72e-10,2;UBERON:0003504,2.72e-10,2;UBERON:0003469,2.72e-10,2;UBERON:0003496,2.72e-10,2;UBERON:0002012,2.72e-10,2;UBERON:0008886,2.72e-10,2;UBERON:0007303,2.72e-10,2;UBERON:0002061,2.72e-10,2;UBERON:0005432,2.72e-10,2;UBERON:0004363,2.72e-10,2;UBERON:0004535,3.98e-10,109;UBERON:0001009,7.67e-10,112;UBERON:0000055,1.80e-09,68;UBERON:0003914,2.13e-09,117;UBERON:0010260,6.11e-09,9;UBERON:0002049,3.12e-08,78;UBERON:0007798,3.12e-08,78;UBERON:0000948,2.68e-07,24;UBERON:0005498,2.68e-07,24;UBERON:0004140,2.68e-07,24;UBERON:0009881,2.68e-07,24;UBERON:0004141,2.68e-07,24;UBERON:0003084,2.68e-07,24;UBERON:0007005,2.68e-07,24;UBERON:0004139,2.68e-07,24;UBERON:0004291,2.68e-07,24;UBERON:0004145,2.79e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,2.51699661725944,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.98613771219828,0,0,0,1.06748995729705,1.2333377420858,0,0.67355336034844,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,1.91699884393266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,4.8662461492277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,1.21746226177622,0.30982349809975,0,0,0,1.78335525740625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.604923695052956,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:216720351..216720357,+ | |||
}} |
Latest revision as of 06:21, 29 July 2015
Short description: | p@chr2:216720351..216720357, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216720351..216720357, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of pulmonary artery | 3.25e-19 | 1 |
smooth muscle cell of the umbilical artery | 6.77e-19 | 4 |
cardiac fibroblast | 8.27e-13 | 6 |
smooth muscle cell of the brachiocephalic vasculature | 1.43e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.25e-19 | 1 |
skin carcinoma | 2.27e-10 | 2 |
skin cancer | 2.27e-10 | 2 |
integumentary system cancer | 2.27e-10 | 2 |