FFCP PHASE1:Mm9::chr10:116715229..116715252,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:116715229..116715252,-|id=chr10:116715229..116715252,-|ontology_enrichment_celltype=CL:0000557!2.80e-08!7;CL:0002194!2.04e-07!4;CL:0000766!2.04e-07!4;CL:0000576!2.04e-07!4;CL:0000235!2.04e-07!4;CL:0002009!2.04e-07!4;CL:0000040!2.04e-07!4;CL:0000559!2.04e-07!4|ontology_enrichment_celltype_v019_2=CL:0002194,8.54e-22,4;CL:0000766,8.54e-22,4;CL:0000234,8.54e-22,4;CL:0000576,8.54e-22,4;CL:0000235,8.54e-22,4;CL:0000864,8.54e-22,4;CL:0002009,8.54e-22,4;CL:0000040,8.54e-22,4;CL:0000559,8.54e-22,4;CL:0002092,3.99e-17,3;CL:0002540,3.99e-17,3;CL:0000473,1.46e-12,7;CL:0000557,1.46e-12,7;CL:0002476,2.99e-12,2;CL:0000878,3.04e-11,2;CL:0000129,3.04e-11,2;CL:0000839,7.83e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.04e-16,3;DOID:4045,5.04e-16,3;DOID:0050686,2.76e-08,6|ontology_enrichment_uberon=UBERON:0002204!1.99e-11!32;UBERON:0002371!7.41e-10!16;UBERON:0001474!1.34e-07!22;UBERON:0004765!1.34e-07!22;UBERON:0001434!1.34e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.31e-16,16;UBERON:0002204,2.22e-15,32;UBERON:0001474,1.87e-11,22;UBERON:0004765,1.87e-11,22;UBERON:0001434,1.87e-11,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,7.11503772252743,5.4693474116666,11.5175223674236,12.9410927366823,12.9778642142105,14.5653105909346,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,37.3458382671781,21.7550599764734,29.1296847127901,13.7816050838466,2.30530983192933,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,2.62181303545181,1.72684981865896,2.31438493730419,61.8244264151016,46.2319831245903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:116715229..116715252,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:116715229..116715252,- | |||
|description=CAGE_peak_at_chr10:116715229..116715252,- | |||
|id=chr10:116715229..116715252,- | |||
|ontology_enrichment_celltype=CL:0000557!2.80e-08!7;CL:0002194!2.04e-07!4;CL:0000766!2.04e-07!4;CL:0000576!2.04e-07!4;CL:0000235!2.04e-07!4;CL:0002009!2.04e-07!4;CL:0000040!2.04e-07!4;CL:0000559!2.04e-07!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.54e-22,4;CL:0000766,8.54e-22,4;CL:0000234,8.54e-22,4;CL:0000576,8.54e-22,4;CL:0000235,8.54e-22,4;CL:0000864,8.54e-22,4;CL:0002009,8.54e-22,4;CL:0000040,8.54e-22,4;CL:0000559,8.54e-22,4;CL:0002092,3.99e-17,3;CL:0002540,3.99e-17,3;CL:0000473,1.46e-12,7;CL:0000557,1.46e-12,7;CL:0002476,2.99e-12,2;CL:0000878,3.04e-11,2;CL:0000129,3.04e-11,2;CL:0000839,7.83e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.04e-16,3;DOID:4045,5.04e-16,3;DOID:0050686,2.76e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.99e-11!32;UBERON:0002371!7.41e-10!16;UBERON:0001474!1.34e-07!22;UBERON:0004765!1.34e-07!22;UBERON:0001434!1.34e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.31e-16,16;UBERON:0002204,2.22e-15,32;UBERON:0001474,1.87e-11,22;UBERON:0004765,1.87e-11,22;UBERON:0001434,1.87e-11,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,7.11503772252743,5.4693474116666,11.5175223674236,12.9410927366823,12.9778642142105,14.5653105909346,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,37.3458382671781,21.7550599764734,29.1296847127901,13.7816050838466,2.30530983192933,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,2.62181303545181,1.72684981865896,2.31438493730419,61.8244264151016,46.2319831245903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:116715229..116715252,- | |||
}} |
Latest revision as of 22:24, 3 August 2015
Short description: | p@chr10:116715229..116715252, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:116715229..116715252, - |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.54e-22 | 4 |
myeloid leukocyte | 8.54e-22 | 4 |
phagocyte | 8.54e-22 | 4 |
monocyte | 8.54e-22 | 4 |
macrophage | 8.54e-22 | 4 |
tissue-resident macrophage | 8.54e-22 | 4 |
macrophage dendritic cell progenitor | 8.54e-22 | 4 |
monoblast | 8.54e-22 | 4 |
promonocyte | 8.54e-22 | 4 |
bone marrow cell | 3.99e-17 | 3 |
mesenchymal stem cell of the bone marrow | 3.99e-17 | 3 |
defensive cell | 1.46e-12 | 7 |
granulocyte monocyte progenitor cell | 1.46e-12 | 7 |
bone marrow macrophage | 2.99e-12 | 2 |
central nervous system macrophage | 3.04e-11 | 2 |
microglial cell | 3.04e-11 | 2 |
myeloid lineage restricted progenitor cell | 7.83e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.31e-16 | 16 |
musculoskeletal system | 2.22e-15 | 32 |
bone element | 1.87e-11 | 22 |
skeletal element | 1.87e-11 | 22 |
skeletal system | 1.87e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.04e-16 | 3 |
muscle cancer | 5.04e-16 | 3 |
organ system cancer | 2.76e-08 | 6 |