FFCP PHASE1:Hg19::chr2:179184955..179185003,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16388 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZF3 | |||
|association_with_transcript=0bp_to_ENST00000315022,NM_145739,uc002uma.2_5end | |||
|cluster_id=chr2:179184955..179185003,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_6_at_OSBPL6_5end | |||
|id=chr2:179184955..179185003,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.76e-22;29!UBERON:0001041;1.07e-12;30 | |||
|ontology_enrichment_disease=DOID:0050619!6.26e-12!1;DOID:1357!6.26e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003127!3.17e-22!2;UBERON:0000341!3.17e-22!2;UBERON:0002171!3.27e-12!1;UBERON:0006518!3.27e-12!1;UBERON:0008949!3.27e-12!1;UBERON:0000101!3.27e-12!1;UBERON:0002167!3.27e-12!1;UBERON:0001764!6.26e-12!1;UBERON:0001825!6.26e-12!1;UBERON:0005178!5.50e-11!34;UBERON:0002224!5.50e-11!34;UBERON:0005181!1.16e-10!35;UBERON:0008947!8.73e-10!38;UBERON:0003258!8.73e-10!38;UBERON:0002048!4.44e-08!22;UBERON:0000117!4.44e-08!22;UBERON:0000171!4.44e-08!22;UBERON:0000170!4.44e-08!22;UBERON:0005597!4.44e-08!22;UBERON:0000118!4.44e-08!22;UBERON:0000915!4.95e-07!52;UBERON:0003126!5.34e-07!7;UBERON:0001005!5.34e-07!7;UBERON:0000065!6.86e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.21e-40;1!UBERON:0006518;2.21e-40;1!UBERON:0008949;2.21e-40;1!UBERON:0000101;2.21e-40;1!UBERON:0002167;2.21e-40;1!UBERON:0003127;3.81e-21;2!UBERON:0002048;5.41e-17;22!UBERON:0000117;5.41e-17;22!UBERON:0000171;5.41e-17;22!UBERON:0000170;5.41e-17;22!UBERON:0005178;1.11e-15;34!UBERON:0002224;1.11e-15;34!UBERON:0000065;7.66e-13;44!UBERON:0005181;2.57e-12;35!UBERON:0000915;1.65e-09;52!UBERON:0003126;5.38e-07;7!UBERON:0001005;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.48e-40,1;UBERON:0006518,1.48e-40,1;UBERON:0008949,1.48e-40,1;UBERON:0000101,1.48e-40,1;UBERON:0002167,1.48e-40,1;UBERON:0003127,3.81e-21,2;UBERON:0005178,2.69e-19,34;UBERON:0002224,2.69e-19,34;UBERON:0005181,9.09e-19,35;UBERON:0008947,2.38e-17,38;UBERON:0003258,2.38e-17,38;UBERON:0002048,5.41e-17,22;UBERON:0000117,5.41e-17,22;UBERON:0000171,5.41e-17,22;UBERON:0000170,5.41e-17,22;UBERON:0005597,5.41e-17,22;UBERON:0000118,5.41e-17,22;UBERON:0000915,7.03e-13,52;UBERON:0000065,1.98e-12,54;UBERON:0005153,1.89e-10,37;UBERON:0001004,3.00e-09,74;UBERON:0005157,2.16e-08,47;UBERON:0001041,5.87e-08,87;UBERON:0003126,5.38e-07,7;UBERON:0001005,5.38e-07,7;UBERON:0005177,6.20e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,15.0916132895679,1.65695622138878,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,1.35535298446752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.952257725854961,0,0,0,0.190941474834495,0,0,0,0,3.58611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@OSBPL6 | |||
}} |
Latest revision as of 11:18, 18 September 2015
Short description: | p6@OSBPL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_OSBPL6_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000315022, NM_145739, uc002uma.2_5end |
EntrezGene: | OSBPL6 |
HGNC: | 16388 |
UniProt: | Q9BZF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.48e-40 | 1 |
right lung lobe | 1.48e-40 | 1 |
lower lobe of lung | 1.48e-40 | 1 |
lobe of lung | 1.48e-40 | 1 |
right lung | 1.48e-40 | 1 |
open tracheal system trachea | 3.81e-21 | 2 |
thoracic cavity element | 2.69e-19 | 34 |
thoracic cavity | 2.69e-19 | 34 |
thoracic segment organ | 9.09e-19 | 35 |
respiratory primordium | 2.38e-17 | 38 |
endoderm of foregut | 2.38e-17 | 38 |
lung | 5.41e-17 | 22 |
respiratory tube | 5.41e-17 | 22 |
respiration organ | 5.41e-17 | 22 |
pair of lungs | 5.41e-17 | 22 |
lung primordium | 5.41e-17 | 22 |
lung bud | 5.41e-17 | 22 |
thoracic segment of trunk | 7.03e-13 | 52 |
respiratory tract | 1.98e-12 | 54 |
epithelial bud | 1.89e-10 | 37 |
respiratory system | 3.00e-09 | 74 |
epithelial fold | 2.16e-08 | 47 |
foregut | 5.87e-08 | 87 |
trachea | 5.38e-07 | 7 |
respiratory airway | 5.38e-07 | 7 |
trunk region element | 6.20e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |