FFCP PHASE1:Hg19::chr2:175411878..175411891,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000442996,uc002uiw.2_5end | |||
|cluster_id=chr2:175411878..175411891,+ | |||
|coexpression_cluster_id=C4146 | |||
|description=CAGE_peak_1_at_ENST00000442996_5end,CAGE_peak_1_at_uc002uiw.2_5end | |||
|id=chr2:175411878..175411891,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.49e-08!7;CL:0000586!1.49e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002563;5.32e-11;4!CL:0002253;3.05e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.07e-11,4;CL:0002253,2.66e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.95e-27!239;DOID:162!5.73e-26!235;DOID:0050687!1.43e-19!143;DOID:0050686!2.66e-19!137;DOID:305!2.35e-12!106;DOID:299!2.11e-11!25;DOID:8692!2.92e-10!31;DOID:3119!5.55e-10!14;DOID:1240!1.02e-08!39;DOID:1036!5.72e-08!8;DOID:2531!5.73e-08!51;DOID:0060083!5.73e-08!51;DOID:3095!5.02e-07!22;DOID:2994!5.02e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.14e-13;8!DOID:5409;1.84e-10;4!DOID:1325;4.05e-10;7!DOID:3904;4.05e-10;7!DOID:4468;8.03e-10;2!DOID:0050615;1.42e-09;16!DOID:299;6.46e-08;25!DOID:8692;6.73e-08;31!DOID:3905;6.92e-08;9!DOID:1324;3.47e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.35e-22,239;DOID:162,1.71e-20,235;DOID:0050687,9.62e-18,143;DOID:0050686,3.43e-14,137;DOID:1036,7.62e-14,8;DOID:305,9.51e-11,106;DOID:5409,2.47e-10,4;DOID:1325,6.42e-10,7;DOID:3904,6.42e-10,7;DOID:4468,1.03e-09,2;DOID:0050615,1.92e-09,16;DOID:299,6.22e-08,25;DOID:8692,7.08e-08,31;DOID:3905,9.83e-08,9;DOID:1324,4.49e-07,15 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;5.32e-11;4!UBERON:0001262;5.32e-11;4!UBERON:0004786;5.32e-11;4!UBERON:0004808;5.32e-11;4!UBERON:0001277;5.32e-11;4!UBERON:0005911;3.16e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.07e-11,4;UBERON:0001262,5.07e-11,4;UBERON:0004786,5.07e-11,4;UBERON:0004808,5.07e-11,4;UBERON:0001277,5.07e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5264102779476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.963528450622197,0.605399121573143,0,0,0.921722292925374,1.78940886313933,2.0021897005429,0,0.556812347790485,0,0,1.6653598399891,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,2.3056390438806,3.76982106521043,1.84700532267414,0,0.457987967009312,1.06606955203727,0,0,0.166211681900156,2.03036094555463,1.76456280885966,2.68514539161348,5.88236571444974,0,1.26598838716816,3.4278889713421,2.82706142867882,5.84249327303646,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,2.25382514053069,0,0,0,0,0,0,0.0969890164884194,1.059073520298,0,2.05562886970126,1.78843150532691,0,0,6.09207033911656,0,0.799238438328521,0.288180834308212,3.6651710773093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.885847333632739,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97022049798414,0,3.05942647104339,0,0,0.129282956361551,0,0,8.45778026780006,0,0,0,0,0.988058159489721,0,0,0,0,0,0,7.85270481251171,0,0,0,0,0,0,0,0,0,1.7127920012698,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19050711170276,1.63771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21755925406597,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0.47404083519818,1.51113852978563,0,0,0,0,0,0,1.53831600949735,1.02256085710989,0.423387050190929,2.97838929107265,0,0,0,0,0.243835849964539,0,0,0,0,0,0,1.42704108933082,5.0825736917532,0,1.20770274853339,0,0,7.99539403814589,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,3.80095503034311,0.305966489225945,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8027305644972,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000442996,p1@uc002uiw.2 | |||
}} |
Latest revision as of 02:38, 29 July 2015
Short description: | p1@ENST00000442996, p1@uc002uiw.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000442996_5end, CAGE_peak_1_at_uc002uiw.2_5end |
Coexpression cluster: | C4146_maxillary_small_smallcell_lung_Prostate_gastric_pancreatic |
Association with transcript: | 9bp_to_ENST00000442996, uc002uiw.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.07e-11 | 4 |
epithelial cell of large intestine | 2.66e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.07e-11 | 4 |
wall of intestine | 5.07e-11 | 4 |
gastrointestinal system mucosa | 5.07e-11 | 4 |
gastrointestinal system epithelium | 5.07e-11 | 4 |
intestinal epithelium | 5.07e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.35e-22 | 239 |
cancer | 1.71e-20 | 235 |
cell type cancer | 9.62e-18 | 143 |
organ system cancer | 3.43e-14 | 137 |
chronic leukemia | 7.62e-14 | 8 |
carcinoma | 9.51e-11 | 106 |
lung small cell carcinoma | 2.47e-10 | 4 |
bronchus cancer | 6.42e-10 | 7 |
bronchogenic carcinoma | 6.42e-10 | 7 |
clear cell adenocarcinoma | 1.03e-09 | 2 |
respiratory system cancer | 1.92e-09 | 16 |
adenocarcinoma | 6.22e-08 | 25 |
myeloid leukemia | 7.08e-08 | 31 |
lung carcinoma | 9.83e-08 | 9 |
lung cancer | 4.49e-07 | 15 |