FFCP PHASE1:Hg19::chr2:173352851..173352862,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:173352851..173352862,+ | |||
|description=CAGE_peak_at_chr2:173352851..173352862,+ | |||
|id=chr2:173352851..173352862,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.91e-16!43;CL:0000066!5.43e-16!254;CL:0000223!1.86e-13!59;CL:0002251!1.07e-10!21;CL:0000076!3.81e-07!62;CL:0000622!7.05e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002621;9.92e-18;3!CL:0002231;1.94e-17;3!CL:0002336;3.73e-14;1!CL:0002261;3.73e-14;1!CL:0002170;3.73e-14;1!CL:0002251;2.53e-10;20!CL:0002076;1.11e-09;42!CL:0000240;2.45e-09;6!CL:0000311;2.45e-09;6!CL:0000079;2.45e-09;6!CL:0000237;2.45e-09;6!CL:0002159;1.26e-08;14!CL:0000317;1.70e-07;2!CL:1000448;1.70e-07;2!CL:0002308;1.70e-07;2!CL:0002140;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,9.14e-18,3;CL:0002231,1.18e-17,3;CL:0002336,4.53e-14,1;CL:0002261,4.53e-14,1;CL:0002170,4.53e-14,1;CL:0002076,2.03e-10,42;CL:0002251,2.65e-10,20;CL:0000240,3.02e-09,6;CL:0000311,3.02e-09,6;CL:0000079,3.02e-09,6;CL:0000237,3.02e-09,6;CL:0000036,3.02e-09,6;CL:0000357,3.02e-09,6;CL:0000114,3.02e-09,6;CL:0002159,1.21e-08,14;CL:0000317,1.28e-07,2;CL:1000448,1.28e-07,2;CL:0002308,1.28e-07,2;CL:0002140,1.28e-07,2;CL:0000223,1.92e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-09;6!CL:0000114;2.45e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!4.97e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.04e-13;1!DOID:3112;1.04e-13;1!DOID:3149;1.04e-13;1!DOID:3451;1.70e-07;2!DOID:4159;1.70e-07;2!DOID:0060122;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.15e-14,1;DOID:3151,1.10e-13,1;DOID:3149,1.10e-13,1;DOID:3451,1.75e-07,2;DOID:4159,1.75e-07,2;DOID:0060122,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.07e-07!169;UBERON:0000925!6.07e-07!169;UBERON:0006595!6.07e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.92e-18;3!UBERON:0003729;9.66e-16;13!UBERON:0000344;2.53e-10;20!UBERON:0000486;5.64e-10;12!UBERON:0003929;3.97e-08;7!UBERON:0002419;1.70e-07;2!UBERON:0007771;1.70e-07;2!UBERON:0003297;1.70e-07;2!UBERON:0001821;1.70e-07;2!UBERON:0003487;1.70e-07;2!UBERON:0001820;1.70e-07;2!UBERON:0000165;1.98e-07;28!UBERON:0003350;3.24e-07;8!UBERON:0001828;3.24e-07;8!UBERON:0004923;4.73e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.14e-18,3;UBERON:0003729,1.04e-15,13;UBERON:0003102,2.03e-11,99;UBERON:0000344,2.65e-10,20;UBERON:0000161,1.24e-08,36;UBERON:0002419,1.28e-07,2;UBERON:0007771,1.28e-07,2;UBERON:0003297,1.28e-07,2;UBERON:0001821,1.28e-07,2;UBERON:0003487,1.28e-07,2;UBERON:0001820,1.28e-07,2;UBERON:0005089,1.28e-07,2;UBERON:0005088,1.28e-07,2;UBERON:0003350,3.14e-07,8;UBERON:0001828,3.14e-07,8;UBERON:0000165,3.64e-07,29;UBERON:0000930,3.64e-07,29 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.976248230192678,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,1.54608682530637,2.45471508531751,0.286804595389004,0.487894824518382,0.265059536642971,0.464775771478074,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,1.10581869652794,2.22212268380471,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,2.85569617938061,0.992425680696705,0.806026704325635,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0,2.99161459204025,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0.120859449591622,1.80455823272956,1.93370076765382,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.991709492165869,0.576570202095319,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0,0.43050537267123,0,0.443430153536676,1.1486170010348,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0.142283686696828,0,0.399158742865633,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.614321404198464,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0.359030577639089,0.54323685961004,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0.195984794828755,0.34823682632161,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.799238438328521,0.288180834308212,0,0,0.432164393964449,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.599037001496973,0.429226048136571,0,0,0,0,0.315132729228895,0.164831716762333,0,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0,0,0,0,1.34173875039706,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0.856396000634902,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0.530067437837643,0.192914038270915,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0.11796972334774,1.28400018965175,0.462102664601353,0,0,0,0.0752103283492573,0,0,0.261906694481422,1.96526301012116,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.62164849248911,0.6828739083758,0.691259661814092,0.430227358820278,0.236664001461131,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0.223710863595585,0.392600934460972,0.243835849964539,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0.0644578879735772,0,0.357107877211315,0,0.160482733378337,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0,0.535928260312357,0,0,0.213233981900981,0.2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| |||
|short_description=p@chr2:173352851..173352862,+ | |||
}} |
Latest revision as of 02:29, 29 July 2015
Short description: | p@chr2:173352851..173352862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:173352851..173352862, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 9.14e-18 | 3 |
epithelial cell of prostate | 1.18e-17 | 3 |
buccal mucosa cell | 4.53e-14 | 1 |
endothelial cell of viscerocranial mucosa | 4.53e-14 | 1 |
keratinized cell of the oral mucosa | 4.53e-14 | 1 |
endo-epithelial cell | 2.03e-10 | 42 |
epithelial cell of alimentary canal | 2.65e-10 | 20 |
stratified squamous epithelial cell | 3.02e-09 | 6 |
keratin accumulating cell | 3.02e-09 | 6 |
stratified epithelial cell | 3.02e-09 | 6 |
keratinizing barrier epithelial cell | 3.02e-09 | 6 |
epithelial fate stem cell | 3.02e-09 | 6 |
stratified epithelial stem cell | 3.02e-09 | 6 |
surface ectodermal cell | 3.02e-09 | 6 |
general ecto-epithelial cell | 1.21e-08 | 14 |
sebum secreting cell | 1.28e-07 | 2 |
epithelial cell of sweat gland | 1.28e-07 | 2 |
epithelial cell of skin gland | 1.28e-07 | 2 |
acinar cell of sebaceous gland | 1.28e-07 | 2 |
endodermal cell | 1.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.14e-18 | 3 |
mouth mucosa | 1.04e-15 | 13 |
surface structure | 2.03e-11 | 99 |
mucosa | 2.65e-10 | 20 |
orifice | 1.24e-08 | 36 |
skin gland | 1.28e-07 | 2 |
epidermis gland | 1.28e-07 | 2 |
gland of integumental system | 1.28e-07 | 2 |
sebaceous gland | 1.28e-07 | 2 |
skin sebaceous gland | 1.28e-07 | 2 |
sweat gland | 1.28e-07 | 2 |
sweat gland placode | 1.28e-07 | 2 |
sebaceous gland placode | 1.28e-07 | 2 |
epithelium of mucosa | 3.14e-07 | 8 |
gingiva | 3.14e-07 | 8 |
mouth | 3.64e-07 | 29 |
stomodeum | 3.64e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.15e-14 | 1 |
skin squamous cell carcinoma | 1.10e-13 | 1 |
keratoacanthoma | 1.10e-13 | 1 |
skin carcinoma | 1.75e-07 | 2 |
skin cancer | 1.75e-07 | 2 |
integumentary system cancer | 1.75e-07 | 2 |