FFCP PHASE1:Hg19::chr9:131871258..131871269,-: Difference between revisions
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|id=chr9:131871258..131871269,-
|short_description=p3@CRAT
|description=CAGE_peak_3_at_CRAT_5end
|association_with_transcript=25bp_to_ENST00000460708,uc004bxg.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1384 | |EntrezGene=1384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2342 | |HGNC=2342 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000460708,uc004bxg.2_5end | |||
|cluster_id=chr9:131871258..131871269,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_3_at_CRAT_5end | |||
|id=chr9:131871258..131871269,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1 | |||
|ontology_enrichment_disease=DOID:5093!2.18e-10!4;DOID:1612!2.18e-10!4;DOID:299!5.59e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0000996!7.40e-11!1;UBERON:0002426!8.14e-11!1;UBERON:0003831!8.14e-11!1;UBERON:0003898!8.14e-11!1;UBERON:0004830!8.14e-11!1;UBERON:0001774!8.14e-11!1;UBERON:0003830!8.14e-11!1;UBERON:0005175!8.14e-11!1;UBERON:0003897!8.14e-11!1;UBERON:0001103!8.14e-11!1;UBERON:0010084!8.14e-11!1;UBERON:0001443!2.83e-08!11;UBERON:0007023!9.81e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.55e-98;1!UBERON:0001911;5.56e-26;4!UBERON:0003100;1.71e-11;41!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.55e-98,1;UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0000076,9.39e-14,8;UBERON:0000310,2.73e-11,10;UBERON:0003100,6.32e-11,41;UBERON:0001443,2.16e-10,11;UBERON:0000162,2.00e-08,14;UBERON:0001353,2.00e-08,14;UBERON:0000163,2.00e-08,14;UBERON:0006866,2.00e-08,14;UBERON:0000164,2.00e-08,14;UBERON:0000931,2.00e-08,14;UBERON:0004122,5.93e-08,15 | |||
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|short_description=p3@CRAT | |||
}} | }} |
Latest revision as of 21:46, 15 September 2015
Short description: | p3@CRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRAT_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 25bp_to_ENST00000460708, uc004bxg.2_5end |
EntrezGene: | CRAT |
HGNC: | 2342 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.55e-98 | 1 |
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
external ectoderm | 9.39e-14 | 8 |
breast | 2.73e-11 | 10 |
female organism | 6.32e-11 | 41 |
chest | 2.16e-10 | 11 |
cloaca | 2.00e-08 | 14 |
anal region | 2.00e-08 | 14 |
embryonic cloaca | 2.00e-08 | 14 |
terminal part of digestive tract | 2.00e-08 | 14 |
primitive urogenital sinus | 2.00e-08 | 14 |
proctodeum | 2.00e-08 | 14 |
genitourinary system | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |