FFCP PHASE1:Hg19::chr2:136634026..136634039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6949 | |||
|TSSclassifier=strong | |||
|UniProt=Q14566 | |||
|association_with_transcript=-15bp_to_NM_005915,uc002tuw.2_5end | |||
|cluster_id=chr2:136634026..136634039,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_MCM6_5end | |||
|id=chr2:136634026..136634039,- | |||
|ontology_enrichment_celltype=CL:0000012!1.43e-07!682;CL:0000548!2.07e-07!679;CL:0000004!2.07e-07!679;CL:0000255!2.07e-07!679;CL:0002319!6.14e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.91e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.39e-35!235;DOID:14566!5.32e-35!239;DOID:2531!1.51e-20!51;DOID:0060083!1.51e-20!51;DOID:0050686!4.50e-20!137;DOID:1240!5.81e-18!39;DOID:0050687!3.78e-17!143;DOID:305!7.14e-15!106;DOID:8692!1.34e-14!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.53e-15;39!DOID:8692;2.73e-15;31!DOID:2531;3.42e-14;51!DOID:0060083;3.42e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.14e-35,235;DOID:14566,3.83e-34,239;DOID:2531,3.68e-22,51;DOID:0060083,3.68e-22,51;DOID:1240,1.22e-19,39;DOID:0050686,4.78e-19,137;DOID:0050687,1.12e-16,143;DOID:8692,6.23e-16,31;DOID:305,2.15e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,6.54e-07,19 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.12763523276777,0,0,0.872338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0.697801167972428,1.96597234917155,1.31883489114227,0.990130823680373,0.331397375727916,0,0,0,0.487932798790507,1.23121058076788,0.816002764977012,1.25381888591235,4.86601178122796,3.55873505189499,4.01736446703369,6.49513948857586,5.17233713534658,5.19491156670283,0,0.383829398097213,0.464448369948228,0.919421224478927,2.71085326900425,0.369754010166788,6.50724484874534,5.9711077644717,6.45920966536664,0,0,0.651032612147555,1.79132379391939,3.2389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0.426730222566507,1.60158394814405,0.574752439954483,0,0,0,0.587237189370939,2.6759125968766,0,1.68152568894461,5.53106578027662,1.7703879310245,0,0.411202997999018,1.00311897234407,0.977766799900771,0.946895611469467,0,1.33692548262208,0.883817722424512,0.886135578334485,0.270803863765016,2.0494611156108,2.60118695119756,1.97325485524411,2.48715016007264,2.60822777161547,0.741432815810302,1.07016331235885,0,2.83273356743915,0,0.68725489096526,1.51811815211702,0.95569624297229,0,0.950452044448374,0.903450714466637,1.4078527226986,1.24930726552346,1.18388626022008,1.64225599384209,0.201606743224732,0.267440195783507,1.44824403882799,0,1.34140171940727,1.02290049474824,2.1686349143074,0.50133791063589,0.869079113764942,2.3858578411533,0.486634870302636,2.17430079477356,1.55210578223795,1.58102614247627,0.785874452986276,0,0.370784442784429,0.97364218096405,1.39303789839414,1.86141144726411,0.476981248610684,0,1.85728750664782,1.78886166630035,1.72046919021225,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,1.04497483268405,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,2.28081631715554,0,0.735326160691737,0,4.91148505562439,2.69435247151404,3.82879033643296,0,0.949265659568129,1.46561395144326,0,0,0,0.496971951695318,1.2663051166458,1.05927344650575,1.14734648299525,1.77334191099179,1.68203280042692,0,0.49333509683432,2.48968828319813,1.34710672069688,3.26923806226917,0.302714855289863,1.15235184896,0.468642863667593,2.80944069147288,2.85235910772225,1.04614076386261,5.40198693761318,5.6655530528846,3.93262258766296,0.61246251376468,4.79053837515895,1.23990937410919,1.18800285728205,1.23633464639278,0.910161361938026,0,6.22843621630045,6.13080747372624,3.04770527032601,2.63386572528503,0.612975591598039,1.80285670687916,2.60894021268048,4.12596162084383,0.640672166455702,1.90738711043606,3.30100205692843,2.37020817248409,1.8034837803194,0.930584281657949,5.06328996723799,1.36411807225678,2.52433774244115,1.65689817556139,1.2931684545505,1.06502877754984,1.5112814734146,1.01736355386293,0.773043412653187,1.09098448236334,0.860413786167011,2.92736894711029,4.5060121229305,3.02104251460748,1.65857688024593,2.77552935963191,2.91981887260664,0,1.28648187638577,4.14404764057442,0,0,4.49565840151407,4.38320194203064,4.57920956778616,4.85293480022533,6.53638332277218,4.03360052488864,5.25842101824641,3.13954344200554,5.00171304030308,0,0,0.4115740113314,0,0,0.982827216677626,0,6.18048339180511,1.72183813960359,2.05881372358231,0.439001141634502,0,2.51322431029077,1.85176890317059,0.325808305310325,0,0,1.39116485970092,0.939269553886573,1.15493158208859,1.38895653772983,1.52203321787679,1.58040879591855,0.858486162094873,0.246217006087397,4.21207677250628,2.0808362720422,1.87467667973554,0.335964256397719,0.708875486211932,0.985143749731331,2.90633938513962,2.68367875415648,0.492663237895943,2.99364675644969,0.621984346622316,0.720599767084807,0.88369703398466,5.07983154337352,0.763976851116555,2.34434894420094,0,4.8328921570562,0.300343057843917,0,2.5790149399433,3.05172048183296,7.6271817253788,0.258543431515556,0,4.22651376278,0,1.04007436911366,1.54324424557285,1.41849132023278,0.266422179016099,0.714889968290738,0.542621605391443,2.46972101034231,4.56030658011229,0,3.16780749173372,0.602878754119172,0.871533458600294,0.599837947092342,1.2162378064119,0,2.10833939483032,1.19812427745791,0,5.70547620162874,1.15825045334063,1.2328579353023,2.68591444859843,6.27676806363753,1.18218456121156,1.2937654491571,0.128343036279748,3.81141936333695,2.60279707715243,3.09315525111078,2.01019518401218,1.91381625495949,0,0,0,0.736148950314839,0.500170521059677,1.08506009479894,0.623912584592421,1.07057393278297,0.473107245101804,1.05427273493442,0.601892199455438,0,0,2.65690239414175,1.84369168541703,1.12948698808508,0.587403472388222,0.343143423810856,1.24060815673732,0.647142602455851,0.853820462427555,1.21251028578504,1.66435439510497,1.20956117331872,0.496215615637554,1.99500565274481,1.40330047216537,0.896974044789907,1.53512174720011,0.64341568457443,1.48418066444991,3.70103265126373,2.4858641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| |||
|short_description=p2@MCM6 | |||
}} |
Latest revision as of 02:37, 17 September 2015
Short description: | p2@MCM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MCM6_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | -15bp_to_NM_005915, uc002tuw.2_5end |
EntrezGene: | MCM6 |
HGNC: | 6949 |
UniProt: | Q14566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 6.54e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.14e-35 | 235 |
disease of cellular proliferation | 3.83e-34 | 239 |
hematologic cancer | 3.68e-22 | 51 |
immune system cancer | 3.68e-22 | 51 |
leukemia | 1.22e-19 | 39 |
organ system cancer | 4.78e-19 | 137 |
cell type cancer | 1.12e-16 | 143 |
myeloid leukemia | 6.23e-16 | 31 |
carcinoma | 2.15e-14 | 106 |