FFCP PHASE1:Hg19::chr9:131446029..131446057,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131446029..131446057,+
|short_description=p6@SET
|description=CAGE_peak_6_at_SET_5end
|association_with_transcript=95bp_to_ENST00000372692,NM_001122821,uc0...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6418 | |EntrezGene=6418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |HGNC=10760 | ||
|TSSclassifier=strong | |||
|UniProt=Q01105,Q5VXV3 | |UniProt=Q01105,Q5VXV3 | ||
|association_with_transcript=95bp_to_ENST00000372692,NM_001122821,uc004bvt.3_5end | |||
|cluster_id=chr9:131446029..131446057,+ | |||
|description=CAGE_peak_6_at_SET_5end | |||
|id=chr9:131446029..131446057,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.02e-20!254;CL:0002321!6.77e-11!248;CL:0000220!2.27e-10!246;CL:0000012!1.55e-08!682;CL:0000548!4.09e-08!679;CL:0000004!4.09e-08!679;CL:0000255!4.09e-08!679;CL:0000077!2.87e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.04e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.25e-17,253;CL:0002321,3.16e-09,250;CL:0000077,1.33e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.97e-25!239;DOID:162!1.65e-23!235;DOID:0050687!2.88e-23!143;DOID:305!2.92e-16!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.77e-25,239;DOID:0050687,5.01e-25,143;DOID:162,7.53e-24,235;DOID:305,7.14e-17,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.80e-07!155;UBERON:0001555!1.80e-07!155;UBERON:0007026!1.80e-07!155;UBERON:0004119!2.81e-07!169;UBERON:0000925!2.81e-07!169;UBERON:0006595!2.81e-07!169;UBERON:0007625!6.27e-07!11;UBERON:0004921!9.53e-07!129;UBERON:0004185!9.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.18e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.14e-07,11 | |||
|phase1_expression=1.63510541343501,0.428201047781966,1.9733616573436,0,1.78784437770915,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0.873765488520689,0.263766978228454,4.70312141248177,1.98838425436749,0,0.602694528023977,2.19093027116212,0.487932798790507,3.81675280038043,2.44800829493104,1.56727360739044,3.72106783270374,3.42186062682211,2.63639543149086,2.59805579543034,2.62721886239826,3.22714203386085,0.393364276848904,0,1.08371286321253,4.59710612239464,0.90361775633475,0.369754010166788,2.55641761914995,2.13253848731132,2.05520307534393,0,0,0.217010870715852,0.447830948479849,0,0.515151135268373,0.145398238779565,0.377875943688809,0,0,0,0.619412741790207,0,0,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0.659702600373432,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.68152568894461,2.63384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,2.68280343881454,3.70801429346238,1.80719576192283,1.00267582127178,1.44846518960824,1.5905718941022,0,13.1403395858054,12.195116860441,11.2428525687201,0.654895377488563,0.364295288292542,1.11235332835329,0,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,1.48583000531826,1.98762407366705,0.860234595106124,1.38856200643038,0,0.838998872419812,0.825354125820202,0.626984899610432,0.775250277507987,1.42306505074684,0.33472061276467,0.402829317109147,0,0.732186172644509,0.735326160691737,1.62028389576352,3.03619076165871,3.14341121676638,3.0405099730497,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,1.49091585508596,1.8994576749687,1.19168262731897,0.860509862246441,1.77334191099179,0,0,0.98667019366864,3.11211035399766,1.34710672069688,1.47115712802113,5.75158225050739,6.91411109375999,0.234321431833797,0.624320153660641,1.71141546463335,1.49448680551801,1.29177948508141,2.10434827678571,1.68540968042698,1.63323337003915,1.22834317311768,1.34323515528495,0,2.22540236350701,0,0.718618141816238,0.841680569770331,1.7516592782075,1.38532057742091,1.31693286264251,0.612975591598039,0.600952235626387,2.26864366320042,0.179389635688862,1.06778694409284,1.27159140695737,0,1.23663035086127,0.257640540045629,0.930584281657949,0.675105328965065,1.46155507741798,1.26216887122057,1.01254888506529,0.969876340912871,1.06502877754984,0.806016785821122,0.847802961552438,0.966304265816484,0.818238361772504,2.29443676311203,4.51302712679503,3.5783037446801,5.46111531486736,3.83545903556871,4.79409616663694,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,2.88751792667834,3.19428360107579,3.37169380156203,2.6511213287183,3.86028904563379,2.83243277320128,2.60997681022206,3.91010793664477,4.90553662813365,5.38646019724947,0,2.80483547606892,1.6462960453256,0,0,0,0.590789906681404,0,2.82873408649161,14.7548316856732,1.42675371031213,1.1240175325762,1.60846355858609,1.94435734832912,0.977424915930974,0,11.5465073620219,6.95582429850461,15.3805389448926,0.721832238805369,0.925971025153221,0.951270761172991,0,0,0.246217006087397,0.702012795417713,0.297262324577456,4.68669169933885,3.19166043577833,2.41017665312057,2.68675568108545,2.61570544662566,0.383382679165211,0,0.352193736052904,0.207328115540772,0,0,0.63497894292169,0,0,0,0.411309970813294,1.50171528921959,0.285826432630578,4.03671903643299,10.899001720832,6.8937988671693,1.03417372606222,0,2.535908257668,3.72313363218819,1.04007436911366,1.02882949704857,0,0.799266537048298,1.85871391755592,0.542621605391443,3.29296134712308,0.65147236858747,3.55391948742546,2.37585561880029,3.31583314765545,3.48613383440118,3.499054691372,0,0,0,2.39624855491583,8.04033550838797,0,0.289562613335158,0,0.179060963239896,0.448340575974109,0,0,0,6.35236560556159,3.90419561572865,0.773288812777695,2.01019518401218,0.637938751653163,0,0,0,5.64380861908043,4.50153468953709,5.96783052139418,1.87173775377726,4.10386674233472,4.57337003598411,1.87426263988341,1.50473049863859,2.27407504055985,3.10419213877515,3.98535359121262,1.29058417979192,1.56390506042549,1.95801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0,0.303127571446259,1.66435439510497,0.30239029332968,1.98486246255021,2.30192959932094,2.80660094433074,1.28139149255701,5.62877973973374,1.28683136914886,1.48418066444991,1.3878872442239,1.24293207719189,2.21743321237285,0,1.97557643381931,2.41718899183244,2.80709058424599,1.01289087829486,2.64073230778596,2.73136752010076,1.70461739447251,1.35359883872224,1.84836809050595,1.56869953835371,0,3.060997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| ||
|short_description=p6@SET | |||
}} | }} |
Latest revision as of 20:22, 15 September 2015
Short description: | p6@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SET_5end |
Coexpression cluster: | NA |
Association with transcript: | 95bp_to_ENST00000372692, NM_001122821, uc004bvt.3_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q01105Q5VXV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.25e-17 | 253 |
embryonic cell | 3.16e-09 | 250 |
mesothelial cell | 1.33e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.14e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.77e-25 | 239 |
cell type cancer | 5.01e-25 | 143 |
cancer | 7.53e-24 | 235 |
carcinoma | 7.14e-17 | 106 |