FFCP PHASE1:Hg19::chr9:131314859..131314877,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131314859..131314877,+
|short_description=p1@SPTAN1
|description=CAGE_peak_1_at_SPTAN1_5end
|association_with_transcript=0bp_to_ENST00000358161,ENST0000037...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6709 | |EntrezGene=6709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11273 | |HGNC=11273 | ||
|TSSclassifier=strong | |||
|UniProt=A6NG51,F8W7K3,A6NN88,Q13813 | |UniProt=A6NG51,F8W7K3,A6NN88,Q13813 | ||
|association_with_transcript=0bp_to_ENST00000358161,ENST00000372719,ENST00000372721,ENST00000372731,ENST00000372739,uc004bvk.2,uc004bvl.3,uc004bvm.3,uc004bvn.3,uc011mbg.1,uc011mbh.1_5end | |||
|cluster_id=chr9:131314859..131314877,+ | |||
|coexpression_cluster_id=C969 | |||
|description=CAGE_peak_1_at_SPTAN1_5end | |||
|id=chr9:131314859..131314877,+ | |||
|ontology_enrichment_celltype=CL:0000222!7.76e-10!119;CL:0000213!9.03e-10!57;CL:0000215!9.03e-10!57;CL:0002139!2.73e-08!24;CL:0000071!5.76e-07!18;CL:0002546!5.76e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.76e-08;24!CL:0000071;5.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.18e-10,121;CL:0000213,1.24e-09,58;CL:0000215,1.24e-09,58;CL:0002139,2.73e-08,24;CL:0000071,5.76e-07,18;CL:0002546,5.76e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;5.95e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.80e-22!194;UBERON:0001049!2.20e-21!57;UBERON:0005068!2.20e-21!57;UBERON:0006241!2.20e-21!57;UBERON:0007135!2.20e-21!57;UBERON:0000477!2.00e-20!286;UBERON:0001017!3.81e-20!82;UBERON:0002616!6.81e-20!59;UBERON:0004111!1.23e-19!241;UBERON:0005743!4.74e-19!86;UBERON:0000955!6.94e-19!69;UBERON:0006238!6.94e-19!69;UBERON:0000073!4.24e-18!94;UBERON:0001016!4.24e-18!94;UBERON:0002780!1.24e-17!41;UBERON:0001890!1.24e-17!41;UBERON:0006240!1.24e-17!41;UBERON:0003080!4.04e-17!42;UBERON:0003075!2.92e-16!86;UBERON:0007284!2.92e-16!86;UBERON:0001893!3.03e-16!34;UBERON:0002020!3.50e-16!34;UBERON:0003528!3.50e-16!34;UBERON:0002791!1.27e-15!33;UBERON:0001869!1.45e-15!32;UBERON:0002346!8.65e-15!90;UBERON:0002619!4.74e-14!22;UBERON:0007023!1.83e-13!115;UBERON:0001950!6.84e-13!20;UBERON:0000119!2.47e-12!312;UBERON:0000483!2.99e-12!309;UBERON:0000956!7.44e-12!25;UBERON:0000203!7.44e-12!25;UBERON:0002049!8.84e-12!79;UBERON:0007798!8.84e-12!79;UBERON:0004121!9.99e-12!169;UBERON:0000055!1.08e-11!69;UBERON:0003056!5.34e-11!61;UBERON:0000924!5.68e-11!173;UBERON:0006601!5.68e-11!173;UBERON:0004872!6.97e-11!84;UBERON:0001981!1.13e-10!60;UBERON:0007500!1.13e-10!60;UBERON:0004537!1.13e-10!60;UBERON:0006965!1.13e-10!60;UBERON:0000153!8.34e-10!129;UBERON:0007811!8.34e-10!129;UBERON:0000033!1.17e-09!123;UBERON:0000475!1.01e-08!365;UBERON:0001009!3.52e-08!113;UBERON:0004535!9.68e-08!110;UBERON:0000064!1.08e-07!219;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0003914!2.26e-07!118;UBERON:0001986!5.76e-07!18;UBERON:0004638!5.76e-07!18;UBERON:0004852!5.76e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.72e-14;22!UBERON:0001893;4.73e-14;34!UBERON:0001869;5.78e-14;32!UBERON:0003528;6.91e-14;34!UBERON:0002020;6.91e-14;34!UBERON:0002791;1.35e-13;32!UBERON:0001950;6.81e-13;20!UBERON:0002780;7.98e-13;41!UBERON:0001890;7.98e-13;41!UBERON:0000073;7.00e-12;53!UBERON:0002616;7.00e-12;53!UBERON:0000956;7.59e-12;25!UBERON:0000203;7.59e-12;25!UBERON:0001017;4.57e-10;75!UBERON:0000955;2.87e-09;68!UBERON:0001016;3.33e-08;83!UBERON:0004638;5.95e-07;18!UBERON:0001986;5.95e-07;18!UBERON:0004852;5.95e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.51e-22,192;UBERON:0001049,7.22e-22,56;UBERON:0005068,7.22e-22,56;UBERON:0006241,7.22e-22,56;UBERON:0007135,7.22e-22,56;UBERON:0001017,1.78e-20,81;UBERON:0000073,2.36e-20,53;UBERON:0002616,2.36e-20,53;UBERON:0004111,1.28e-19,240;UBERON:0001016,2.42e-19,89;UBERON:0000955,3.02e-19,68;UBERON:0006238,3.02e-19,68;UBERON:0002780,1.24e-17,41;UBERON:0001890,1.24e-17,41;UBERON:0003080,1.24e-17,41;UBERON:0006240,1.24e-17,41;UBERON:0001893,3.03e-16,34;UBERON:0003528,3.50e-16,34;UBERON:0002020,3.50e-16,34;UBERON:0003075,5.70e-16,82;UBERON:0007284,5.70e-16,82;UBERON:0001869,1.45e-15,32;UBERON:0002791,4.06e-15,32;UBERON:0010314,1.59e-14,132;UBERON:0002346,1.79e-14,86;UBERON:0002619,4.74e-14,22;UBERON:0007023,4.74e-13,114;UBERON:0001950,6.84e-13,20;UBERON:0010371,2.30e-12,104;UBERON:0000119,6.12e-12,309;UBERON:0000483,7.40e-12,306;UBERON:0000956,7.44e-12,25;UBERON:0000203,7.44e-12,25;UBERON:0002049,1.10e-11,78;UBERON:0007798,1.10e-11,78;UBERON:0000055,1.33e-11,68;UBERON:0003056,1.75e-11,61;UBERON:0004121,6.19e-11,171;UBERON:0000924,6.19e-11,171;UBERON:0006601,6.19e-11,171;UBERON:0004872,8.72e-11,83;UBERON:0007500,1.38e-10,59;UBERON:0001981,1.38e-10,59;UBERON:0004537,1.38e-10,59;UBERON:0006965,1.38e-10,59;UBERON:0001009,4.39e-08,112;UBERON:0011216,9.30e-08,223;UBERON:0004535,1.20e-07,109;UBERON:0001637,1.51e-07,42;UBERON:0003509,1.51e-07,42;UBERON:0004572,1.51e-07,42;UBERON:0003914,2.78e-07,117;UBERON:0004638,5.76e-07,18;UBERON:0001986,5.76e-07,18;UBERON:0004852,5.76e-07,18 | |||
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| ||
|short_description=p1@SPTAN1 | |||
}} | }} |
Latest revision as of 20:00, 15 September 2015
Short description: | p1@SPTAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPTAN1_5end |
Coexpression cluster: | C969_mature_insula_mesodermal_occipital_Preadipocyte_temporal_heart |
Association with transcript: | 0bp_to_ENST00000358161, ENST00000372719, ENST00000372721, ENST00000372731, ENST00000372739, uc004bvk.2, uc004bvl.3, uc004bvm.3, uc004bvn.3, uc011mbg.1, uc011mbh.1_5end |
EntrezGene: | SPTAN1 |
HGNC: | 11273 |
UniProt: | A6NG51F8W7K3A6NN88Q13813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.18e-10 | 121 |
lining cell | 1.24e-09 | 58 |
barrier cell | 1.24e-09 | 58 |
endothelial cell of vascular tree | 2.73e-08 | 24 |
blood vessel endothelial cell | 5.76e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.76e-07 | 18 |