FFCP PHASE1:Hg19::chr2:108602872..108602882,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14025 | |||
|TSSclassifier=strong | |||
|UniProt=Q9GZV3 | |||
|association_with_transcript=-96bp_to_ENST00000409059_5end | |||
|cluster_id=chr2:108602872..108602882,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_5_at_SLC5A7_5end | |||
|id=chr2:108602872..108602882,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.82e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.54e-25!115;UBERON:0005743!5.38e-19!86;UBERON:0001049!1.09e-18!57;UBERON:0005068!1.09e-18!57;UBERON:0006241!1.09e-18!57;UBERON:0007135!1.09e-18!57;UBERON:0001017!6.63e-18!82;UBERON:0003076!1.39e-17!15;UBERON:0003057!1.39e-17!15;UBERON:0002298!1.98e-17!8;UBERON:0000988!2.53e-17!3;UBERON:0000073!7.51e-17!94;UBERON:0001016!7.51e-17!94;UBERON:0004733!2.17e-16!12;UBERON:0002028!2.17e-16!12;UBERON:0007277!2.17e-16!12;UBERON:0002616!1.75e-15!59;UBERON:0004732!4.36e-15!13;UBERON:0003075!5.10e-15!86;UBERON:0007284!5.10e-15!86;UBERON:0002346!3.37e-14!90;UBERON:0001905!4.14e-13!2;UBERON:0002757!4.14e-13!2;UBERON:0010134!4.14e-13!2;UBERON:0002784!4.14e-13!2;UBERON:0005408!4.14e-13!2;UBERON:0001899!4.14e-13!2;UBERON:0000955!1.23e-12!69;UBERON:0006238!1.23e-12!69;UBERON:0002148!2.10e-12!2;UBERON:0009662!2.10e-12!2;UBERON:0002308!2.91e-10!9;UBERON:0000125!2.91e-10!9;UBERON:0002680!3.80e-10!9;UBERON:0001895!3.80e-10!9;UBERON:0010092!3.80e-10!9;UBERON:0004121!6.09e-10!169;UBERON:0000924!1.29e-09!173;UBERON:0006601!1.29e-09!173;UBERON:0001896!1.43e-08!3;UBERON:0005290!1.43e-08!3;UBERON:0010096!1.43e-08!3;UBERON:0006331!1.49e-08!3;UBERON:0000033!3.87e-08!123;UBERON:0001894!3.98e-08!7;UBERON:0006222!3.98e-08!7;UBERON:0000153!1.28e-07!129;UBERON:0007811!1.28e-07!129;UBERON:0002780!1.88e-07!41;UBERON:0001890!1.88e-07!41;UBERON:0006240!1.88e-07!41;UBERON:0003080!2.98e-07!42;UBERON:0002020!5.80e-07!34;UBERON:0003528!5.80e-07!34;UBERON:0003296!5.86e-07!4;UBERON:0010133!5.86e-07!4;UBERON:0000481!6.60e-07!347;UBERON:0006834!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1065826145229,15.4690512220659,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@SLC5A7 | |||
}} |
Latest revision as of 05:43, 16 September 2015
Short description: | p5@SLC5A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC5A7_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -96bp_to_ENST00000409059_5end |
EntrezGene: | SLC5A7 |
HGNC: | 14025 |
UniProt: | Q9GZV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |