FFCP PHASE1:Hg19::chr2:102604493..102604499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:102604493..102604499,+ | |||
|description=CAGE_peak_at_chr2:102604493..102604499,+ | |||
|id=chr2:102604493..102604499,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.39e-34!3;CL:0000511!7.89e-13!1;CL:0002625!7.89e-13!1;CL:0000216!7.89e-13!1;CL:0002537!6.80e-10!5;CL:0002195!8.06e-07!2;CL:0002571!8.06e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.92e-53;3!CL:0000511;1.81e-40;1!CL:0002625;1.81e-40;1!CL:0000216;1.81e-40;1!CL:0000349;1.48e-19;19!CL:0002537;3.10e-09;5!CL:0000723;4.37e-08;61!CL:0000154;6.55e-08;6!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.87e-53,3;CL:0000511,9.91e-41,1;CL:0002625,9.91e-41,1;CL:0000216,9.91e-41,1;CL:0000349,1.68e-19,19;CL:0002537,3.22e-09,5;CL:0000154,5.92e-08,6;CL:0002149,6.34e-08,6;CL:0002255,6.34e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5662!3.85e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.39e-34!3;UBERON:0000920!1.39e-34!3;UBERON:0005631!2.05e-28!14;UBERON:0000158!2.05e-28!14;UBERON:0003124!6.32e-26!7;UBERON:0000478!3.26e-22!24;UBERON:0004871!2.83e-13!8;UBERON:0001136!7.89e-13!1;UBERON:0001343!7.89e-13!1;UBERON:0004910!7.89e-13!1;UBERON:0005154!7.89e-13!1;UBERON:0005295!7.89e-13!1;UBERON:0004813!7.89e-13!1;UBERON:0005297!7.89e-13!1;UBERON:0005294!7.89e-13!1;UBERON:0010141!7.89e-13!1;UBERON:0005891!7.89e-13!1;UBERON:0007029!1.75e-12!1;UBERON:0000305!2.60e-07!7;UBERON:0004909!4.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.92e-53;3!UBERON:0000920;1.92e-53;3!UBERON:0001136;1.81e-40;1!UBERON:0001343;1.81e-40;1!UBERON:0004910;1.81e-40;1!UBERON:0004813;1.81e-40;1!UBERON:0005631;3.05e-36;10!UBERON:0000158;3.05e-36;10!UBERON:0004909;5.15e-21;2!UBERON:0000478;1.13e-15;24!UBERON:0005904;3.26e-11;4!UBERON:0000305;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.87e-53,3;UBERON:0001136,9.91e-41,1;UBERON:0001343,9.91e-41,1;UBERON:0004910,9.91e-41,1;UBERON:0005154,9.91e-41,1;UBERON:0005295,9.91e-41,1;UBERON:0004813,9.91e-41,1;UBERON:0005297,9.91e-41,1;UBERON:0005294,9.91e-41,1;UBERON:0010141,9.91e-41,1;UBERON:0005891,9.91e-41,1;UBERON:0005631,4.10e-26,14;UBERON:0000158,4.10e-26,14;UBERON:0003124,1.44e-23,7;UBERON:0004909,3.81e-21,2;UBERON:0004871,8.98e-21,8;UBERON:0000478,1.25e-15,24;UBERON:0005904,2.80e-11,4;UBERON:0000305,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0,0.957003479195758,1.37396390102793,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56203764501618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:102604493..102604499,+ | |||
}} |
Latest revision as of 22:47, 28 July 2015
Short description: | p@chr2:102604493..102604499, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:102604493..102604499, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.87e-53 | 3 |
androgen binding protein secreting cell | 9.91e-41 | 1 |
seminiferous tubule epithelial cell | 9.91e-41 | 1 |
Sertoli cell | 9.91e-41 | 1 |
extraembryonic cell | 1.68e-19 | 19 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
protein secreting cell | 5.92e-08 | 6 |
epithelial cell of uterus | 6.34e-08 | 6 |
stromal cell of endometrium | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.87e-53 | 3 |
mesothelium | 9.91e-41 | 1 |
seminiferous tubule of testis | 9.91e-41 | 1 |
epithelium of male gonad | 9.91e-41 | 1 |
epithelial cord | 9.91e-41 | 1 |
sex cord | 9.91e-41 | 1 |
seminiferous tubule epithelium | 9.91e-41 | 1 |
testis sex cord | 9.91e-41 | 1 |
genital ridge | 9.91e-41 | 1 |
primitive sex cord of indifferent gonad | 9.91e-41 | 1 |
coelomic epithelium | 9.91e-41 | 1 |
extraembryonic membrane | 4.10e-26 | 14 |
membranous layer | 4.10e-26 | 14 |
chorion | 1.44e-23 | 7 |
epithelium of gonad | 3.81e-21 | 2 |
somatic layer of lateral plate mesoderm | 8.98e-21 | 8 |
extraembryonic structure | 1.25e-15 | 24 |
duct of male reproductive system | 2.80e-11 | 4 |
amnion | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.34e-08 | 6 |