FFCP PHASE1:Hg19::chr22:46663895..46663937,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26082 | |||
|TSSclassifier=strong | |||
|UniProt=A9UJP8 | |||
|association_with_transcript=0bp_to_ENST00000421359,ENST00000475467_5end | |||
|cluster_id=chr22:46663895..46663937,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_TTC38_5end | |||
|id=chr22:46663895..46663937,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.61e-14!119;CL:0000183!1.65e-13!59;CL:0000055!6.04e-13!180;CL:0000187!2.87e-11!54;CL:0000680!2.97e-11!57;CL:0000056!2.97e-11!57;CL:0000355!2.97e-11!57;CL:0000192!1.00e-10!42;CL:0000514!1.00e-10!42;CL:0000393!2.88e-10!60;CL:0000211!2.88e-10!60;CL:0000115!7.82e-10!35;CL:0000359!2.30e-09!32;CL:0002078!7.21e-09!44;CL:0002321!2.68e-08!248;CL:0000220!3.44e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.64e-09;32!CL:0000115;1.50e-08;36!CL:0000192;3.20e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.73e-15,121;CL:0000187,1.35e-11,55;CL:0000680,1.41e-11,58;CL:0000056,1.41e-11,58;CL:0000355,1.41e-11,58;CL:0000192,4.63e-11,43;CL:0000514,4.63e-11,43;CL:0000393,1.40e-10,61;CL:0000211,1.40e-10,61;CL:0000115,4.14e-10,36;CL:0000359,2.30e-09,32;CL:0002078,3.90e-09,45;CL:0002321,1.11e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.20e-08;43!CL:0000355;8.70e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.14e-20!118;UBERON:0005256!2.26e-16!143;UBERON:0002049!9.70e-16!79;UBERON:0007798!9.70e-16!79;UBERON:0000490!1.43e-15!138;UBERON:0000055!9.31e-14!69;UBERON:0000481!9.47e-14!347;UBERON:0004872!1.49e-13!84;UBERON:0003104!6.35e-13!238;UBERON:0009142!6.35e-13!238;UBERON:0001981!8.69e-13!60;UBERON:0007500!8.69e-13!60;UBERON:0004537!8.69e-13!60;UBERON:0006965!8.69e-13!60;UBERON:0004290!1.26e-12!70;UBERON:0001009!2.39e-12!113;UBERON:0002385!2.69e-12!63;UBERON:0001015!2.69e-12!63;UBERON:0000383!2.69e-12!63;UBERON:0001134!5.38e-12!61;UBERON:0002036!5.38e-12!61;UBERON:0003082!5.38e-12!61;UBERON:0004535!1.51e-11!110;UBERON:0000119!1.59e-11!312;UBERON:0000914!2.37e-11!83;UBERON:0002329!2.37e-11!83;UBERON:0003077!2.37e-11!83;UBERON:0003059!2.37e-11!83;UBERON:0007282!2.37e-11!83;UBERON:0009618!2.37e-11!83;UBERON:0007285!2.37e-11!83;UBERON:0002100!2.64e-11!216;UBERON:0005172!3.69e-11!55;UBERON:0005173!3.69e-11!55;UBERON:0000483!7.51e-11!309;UBERON:0000477!2.40e-10!286;UBERON:0000468!7.17e-10!659;UBERON:0000486!7.23e-10!82;UBERON:0001637!7.60e-10!42;UBERON:0003509!7.60e-10!42;UBERON:0004572!7.60e-10!42;UBERON:0002417!2.09e-09!61;UBERON:0000916!2.09e-09!61;UBERON:0003103!6.36e-09!69;UBERON:0000025!9.14e-09!194;UBERON:0004111!3.14e-08!241;UBERON:0000467!3.22e-08!625;UBERON:0000480!5.05e-08!626;UBERON:0000475!5.36e-08!365;UBERON:0002113!9.23e-08!27;UBERON:0003918!9.23e-08!27;UBERON:0005095!9.23e-08!27;UBERON:0007687!9.23e-08!27;UBERON:0004573!2.30e-07!33;UBERON:0004571!2.30e-07!33;UBERON:0009569!4.42e-07!113;UBERON:0000926!4.76e-07!448;UBERON:0004120!4.76e-07!448;UBERON:0006603!4.76e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;6.83e-08;74!UBERON:0000055;1.61e-07;65!UBERON:0002113;1.83e-07;24!UBERON:0011143;1.83e-07;24!UBERON:0007500;1.98e-07;56!UBERON:0001981;1.98e-07;56!UBERON:0004537;1.98e-07;56!UBERON:0005172;2.11e-07;52!UBERON:0005173;2.11e-07;52!UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0002049;5.78e-07;75!UBERON:0007798;5.78e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.76e-20,117;UBERON:0003104,5.39e-20,160;UBERON:0009142,5.39e-20,160;UBERON:0000490,8.96e-17,148;UBERON:0002049,3.68e-16,78;UBERON:0007798,3.68e-16,78;UBERON:0007503,2.67e-15,78;UBERON:0005256,4.82e-15,122;UBERON:0000055,3.55e-14,68;UBERON:0004872,6.53e-14,83;UBERON:0007500,3.18e-13,59;UBERON:0001981,3.18e-13,59;UBERON:0004537,3.18e-13,59;UBERON:0006965,3.18e-13,59;UBERON:0002329,5.98e-13,71;UBERON:0003059,5.98e-13,71;UBERON:0007282,5.98e-13,71;UBERON:0004290,5.98e-13,71;UBERON:0009618,5.98e-13,71;UBERON:0002385,1.27e-12,64;UBERON:0001015,1.27e-12,64;UBERON:0000383,1.27e-12,64;UBERON:0001009,1.27e-12,112;UBERON:0007524,2.15e-12,73;UBERON:0001134,2.54e-12,62;UBERON:0002036,2.54e-12,62;UBERON:0003082,2.54e-12,62;UBERON:0003077,2.66e-12,72;UBERON:0007285,2.66e-12,72;UBERON:0004535,8.21e-12,109;UBERON:0000119,1.05e-11,309;UBERON:0002100,1.23e-11,199;UBERON:0000483,5.02e-11,306;UBERON:0005172,7.77e-11,54;UBERON:0005173,7.77e-11,54;UBERON:0000486,3.73e-10,83;UBERON:0001637,7.60e-10,42;UBERON:0003509,7.60e-10,42;UBERON:0004572,7.60e-10,42;UBERON:0002417,4.18e-09,60;UBERON:0000916,4.18e-09,60;UBERON:0003103,1.23e-08,68;UBERON:0000025,2.87e-08,192;UBERON:0004111,7.31e-08,240;UBERON:0002113,1.98e-07,26;UBERON:0003918,1.98e-07,26;UBERON:0011143,1.98e-07,26;UBERON:0005095,1.98e-07,26;UBERON:0007687,1.98e-07,26;UBERON:0004573,2.30e-07,33;UBERON:0004571,2.30e-07,33;UBERON:0009569,4.73e-07,112 | |||
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| |||
|short_description=p1@TTC38 | |||
}} |
Latest revision as of 05:27, 25 September 2015
Short description: | p1@TTC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC38_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000421359, ENST00000475467_5end |
EntrezGene: | TTC38 |
HGNC: | 26082 |
UniProt: | A9UJP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.73e-15 | 121 |
muscle cell | 1.35e-11 | 55 |
muscle precursor cell | 1.41e-11 | 58 |
myoblast | 1.41e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-11 | 58 |
smooth muscle cell | 4.63e-11 | 43 |
smooth muscle myoblast | 4.63e-11 | 43 |
electrically responsive cell | 1.40e-10 | 61 |
electrically active cell | 1.40e-10 | 61 |
endothelial cell | 4.14e-10 | 36 |
vascular associated smooth muscle cell | 2.30e-09 | 32 |
meso-epithelial cell | 3.90e-09 | 45 |
embryonic cell | 1.11e-08 | 250 |