FFCP PHASE1:Hg19::chr22:36725352..36725370,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7579 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-355bp_to_ENST00000463027_5end | |||
|cluster_id=chr22:36725352..36725370,- | |||
|description=CAGE_peak_47_at_MYH9_5end | |||
|id=chr22:36725352..36725370,- | |||
|ontology_enrichment_celltype=CL:0000220!1.43e-08!246;CL:0002321!1.43e-08!248;CL:0002368!5.69e-08!13;CL:0000066!2.28e-07!254;CL:0000548!2.89e-07!679;CL:0000004!2.89e-07!679;CL:0000255!2.89e-07!679;CL:0002076!3.33e-07!43;CL:0000012!5.79e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.71e-11;9!CL:0002632;1.71e-11;9!CL:0000307;1.43e-09;3!CL:0000632;2.74e-09;3!CL:0000128;1.37e-08;7!CL:0000126;1.37e-08;7!CL:0000127;1.37e-08;7!CL:0002368;5.45e-08;13!CL:0002032;1.39e-07;1!CL:1001319;1.39e-07;1!CL:1000600;1.39e-07;1!CL:0000557;1.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.15e-11,9;CL:0002632,1.15e-11,9;CL:0000068,1.66e-09,3;CL:0000069,1.66e-09,3;CL:0000307,1.66e-09,3;CL:0000377,1.66e-09,3;CL:0000632,3.26e-09,3;CL:0000128,2.50e-08,7;CL:0000126,2.50e-08,7;CL:0000127,2.50e-08,7;CL:0002453,2.50e-08,7;CL:0002368,4.18e-08,13;CL:1001319,1.22e-07,1;CL:1000600,1.22e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;1.43e-09;3!UBERON:0000358;5.03e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.39e-07;1!DOID:3571;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.01e-07,1;DOID:3571,2.31e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.92e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.39e-07;1!UBERON:0001256;1.39e-07;1!UBERON:0001259;1.39e-07;1!UBERON:0007196;6.19e-07;15!UBERON:0001558;6.19e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.22e-07,1;UBERON:0001256,1.22e-07,1;UBERON:0001259,1.22e-07,1;UBERON:0007196,4.93e-07,15;UBERON:0001558,4.93e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,1.0007329835313,0.893922188854576,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0.738726348460727,1.02000345622126,0.313454721478088,0,0.684372125364421,1.00434111675842,0,0,0.0787107813136792,0,0,0.154816123316076,0,1.50602959389125,0.739508020333575,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,1.44824403882799,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.661743720148475,1.33037638477538,0.527008714158756,0,0.364295288292542,1.11235332835329,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0.66944122552934,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.916008719652036,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,0.70296429550139,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,0.89694817844431,0.213557388818567,0,0,0,1.03056216018252,0.744467425326359,0.168776332241266,0.389748020644795,0.504867548488229,0,0,0.710019185033229,0.503760491138201,0.339121184620975,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0.115930404975077,0.587043471179108,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0.179060963239896,0,0.197030760201927,1.2937654491571,0.385029108839245,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0.604780586659361,0,0.920771839728375,0.561320188866147,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0.231046011313244,1.56869953835371,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0.671624264166535,0,0,0,1.64007322849853,0.976135183992909,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.768760269460425,0.382838137483752,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0.74129687641568,0.572499546967965,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0.811641507850816,0,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0,0,0.379473173765715,0.349934720244983,0.288666338176536,1.34060455107157,2.17781969722645,0.188287601553558,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.735120647943095,0,0,0.0711418433484141,0.478278818186467,0.399158742865633,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,1.70481688083848,0,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,1.43176155503017,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,1.6156375993759,0.434589487688032,0,0.366390373607449,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0.158936578980379,0,0.652931232636591,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.252746318513952,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0.209205692624666,0.203996435272644,0.288950589901519,0,0,1.27746588066972,0.429765441419957,0.262887354279314,0,0,0,0,0,0.446342914883745,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.121499113316049,0,0,0,0.316801009558219,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,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| |||
|short_description=p47@MYH9 | |||
}} |
Latest revision as of 02:14, 20 September 2015
Short description: | p47@MYH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_MYH9_5end |
Coexpression cluster: | NA |
Association with transcript: | -355bp_to_ENST00000463027_5end |
EntrezGene: | MYH9 |
HGNC: | 7579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.15e-11 | 9 |
epithelial cell of lower respiratory tract | 1.15e-11 | 9 |
duct epithelial cell | 1.66e-09 | 3 |
branched duct epithelial cell | 1.66e-09 | 3 |
tracheal epithelial cell | 1.66e-09 | 3 |
tracheoblast | 1.66e-09 | 3 |
hepatic stellate cell | 3.26e-09 | 3 |
oligodendrocyte | 2.50e-08 | 7 |
macroglial cell | 2.50e-08 | 7 |
astrocyte | 2.50e-08 | 7 |
oligodendrocyte precursor cell | 2.50e-08 | 7 |
respiratory epithelial cell | 4.18e-08 | 13 |
bladder cell | 1.22e-07 | 1 |
lower urinary tract cell | 1.22e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.22e-07 | 1 |
wall of urinary bladder | 1.22e-07 | 1 |
mucosa of urinary bladder | 1.22e-07 | 1 |
tracheobronchial tree | 4.93e-07 | 15 |
lower respiratory tract | 4.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.01e-07 | 1 |
liver cancer | 2.31e-07 | 1 |