FFCP PHASE1:Hg19::chr21:46321607..46321655,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:46321607..46321655,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr21:46321607..46321655,- | |||
|id=chr21:46321607..46321655,- | |||
|ontology_enrichment_celltype=CL:0000738!4.86e-64!140;CL:0000037!1.13e-63!172;CL:0000566!1.13e-63!172;CL:0002032!1.39e-59!165;CL:0000837!1.39e-59!165;CL:0000988!1.12e-57!182;CL:0002087!9.07e-57!119;CL:0000766!1.31e-51!76;CL:0002009!2.71e-51!65;CL:0002031!4.47e-50!124;CL:0000763!7.84e-50!112;CL:0000049!7.84e-50!112;CL:0002194!1.02e-49!63;CL:0000576!1.02e-49!63;CL:0000040!1.02e-49!63;CL:0000559!1.02e-49!63;CL:0000557!7.97e-45!71;CL:0002057!1.25e-43!42;CL:0000839!2.64e-42!70;CL:0000860!1.98e-39!45;CL:0000134!5.49e-14!358;CL:0002320!5.21e-13!365;CL:0000219!4.52e-11!390;CL:0002393!1.36e-09!9;CL:0002397!1.36e-09!9;CL:0000542!1.73e-09!53;CL:0000051!1.73e-09!53;CL:0000838!3.69e-09!52;CL:0000094!2.15e-08!8;CL:0000084!5.24e-08!25;CL:0000827!5.24e-08!25;CL:0000048!6.55e-07!430;CL:0000990!7.84e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.73e-58;33!CL:0002057;6.73e-58;33!CL:0000473;7.69e-58;39!CL:0000234;7.69e-58;39!CL:0000576;2.72e-49;48!CL:0000766;2.66e-39;69!CL:0000763;1.27e-20;100!CL:0002087;7.38e-19;104!CL:0000738;2.33e-18;136!CL:0000235;1.16e-12;6!CL:0000988;2.22e-11;177!CL:0002393;2.52e-11;6!CL:0002397;2.52e-11;6!CL:0000094;3.26e-11;8!CL:0000081;8.01e-08;11!CL:0000219;1.76e-07;193!CL:0000840;1.80e-07;5!CL:0000775;6.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.36e-92,61;CL:0000766,6.04e-92,72;CL:0000473,6.69e-91,48;CL:0000234,6.69e-91,48;CL:0002194,2.62e-89,59;CL:0000576,2.62e-89,59;CL:0000040,2.62e-89,59;CL:0000559,2.62e-89,59;CL:0000557,1.75e-82,67;CL:0000860,4.26e-79,42;CL:0002057,4.26e-79,42;CL:0000839,3.75e-78,66;CL:0000738,3.28e-73,136;CL:0002087,1.62e-68,115;CL:0000763,6.98e-68,108;CL:0000049,6.98e-68,108;CL:0002031,2.78e-64,120;CL:0000037,4.40e-62,168;CL:0002032,9.80e-62,161;CL:0000837,9.80e-62,161;CL:0000988,8.50e-58,177;CL:0000134,1.10e-18,354;CL:0002320,6.67e-18,361;CL:0002393,2.76e-16,9;CL:0002397,2.76e-16,9;CL:0000219,3.67e-15,386;CL:0000235,1.14e-12,6;CL:0000048,7.52e-12,427;CL:0000723,2.13e-11,433;CL:0000034,2.36e-11,441;CL:0000094,2.92e-11,8;CL:0000081,7.43e-08,11;CL:0000840,2.10e-07,5;CL:0001029,2.10e-07,5;CL:0000775,6.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-56;42!CL:0000049;3.52e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.35e-47!102;UBERON:0003061!5.35e-47!102;UBERON:0002193!2.95e-42!112;UBERON:0002371!2.88e-38!80;UBERON:0001474!7.10e-34!86;UBERON:0002405!2.76e-27!115;UBERON:0004765!3.31e-26!101;UBERON:0001434!3.31e-26!101;UBERON:0002384!3.71e-12!375;UBERON:0003081!3.26e-11!216;UBERON:0002204!7.01e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.02e-08;15!UBERON:0000179;2.02e-08;15!UBERON:0000463;2.02e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-73,98;UBERON:0003061,1.26e-73,98;UBERON:0002371,9.30e-71,76;UBERON:0002193,4.76e-65,108;UBERON:0001474,2.32e-64,82;UBERON:0004765,3.76e-57,90;UBERON:0002405,8.57e-57,93;UBERON:0001434,9.32e-50,100;UBERON:0003081,9.00e-26,203;UBERON:0002204,3.60e-23,167;UBERON:0002384,7.73e-17,371;UBERON:0000926,2.20e-10,315;UBERON:0004120,2.20e-10,315;UBERON:0006603,2.20e-10,315;UBERON:0000178,2.42e-08,15;UBERON:0000179,2.42e-08,15;UBERON:0000463,2.42e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.550975469195755,3.14691421479123,0.767658796194425,1.85779347979291,0,0,0,0,0,0.293600439334847,1.66198622559563,8.82395568868623,3.90619567288533,2.91090116511902,3.56283032620878,2.83333124397605,12.9404432513813,9.82477453590904,4.85168122375632,16.5024616203036,6.57868620834921,3.71647645074124,14.6723120084297,11.2710710872804,7.09446689665756,9.65287906062532,9.68227025375739,13.5426486594342,13.9299331261527,8.73299680185107,3.59557575112135,13.4676912643197,6.41858054152187,5.11469700639233,12.8642007072819,12.3667467725412,7.2458207590558,15.0908804086864,4.53908179752912,6.85104473895132,18.592401228999,7.30076085788282,6.73285418585862,12.1079900526674,4.05105399586321,5.69632297393592,7.81644559354185,5.31510749912609,1.25795187305026,6.29040334420373,8.10955221344134,4.50031642751824,4.56020389985998,6.96208370196815,1.64397738388171,0,0,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,1.14681968437569,1.32171328579026,0.560508562981536,0,0,1.96505381374582,2.05601498999509,1.00311897234407,0.977766799900771,1.4203434172042,1.94826728407911,2.22820913770347,0.294605907474837,0.664601683750863,1.89562704635511,1.79327847615945,1.69077151827842,1.80881695064044,1.38175008892924,2.02862160014537,1.18629250529648,1.33770414044857,2.09071047609954,1.24640276967323,1.14966148080576,0.68725489096526,1.26509846009751,0.637130828648193,0,0,1.05402583354441,1.15187950038977,0,2.13099526839615,0,1.61285394579786,3.7441627409691,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,3.24547393654683,1.39303789839414,7.31268782853758,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,5.85010662848094,8.62060741274624,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,5.02257091432126,23.1917333431335,0,0,0,0,0.205476322550383,0,0.784596007954691,1.37921532141349,3.66566877261179,2.43851768931522,0,0,0,0,0,5.24304916763028,41.8826042885635,2.07207756718018,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0.82707210449155,7.54999702865159,3.73546452312055,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,1.52927441428475,7.40541343326411,1.66762242820452,0.822724546172388,1.29694662238543,1.08006287447623,6.34500141035416,0,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0.399158742865633,0.5745161103971,3.38677732358213,0,1.40398589056729,0.456469358066384,0.313359791546046,0,0.169291777801603,0.481764225311099,0.201799707191048,0.425846237690326,2.40453741329035,0.921722292925374,0.223676107892416,0.667396566847634,1.17232857241224,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,3.06579894587209,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.788662062837943,0,0,0,0,0.858452096273142,0,0,0,0,0,0.164831716762333,0,0,0.254019996197353,0,0,0,0,0,1.1248694577575,1.5476039091159,0.0607495566580247,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0.79994958341972,1.06691729694141,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.743614585554013,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0,0,0,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0.469919589899268,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0.213233981900981,0,0.258355639344024,0.31037357147929,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.641136984606466 | |||
|short_description=p@chr21:46321607..46321655,- | |||
}} |
Latest revision as of 18:32, 28 July 2015
Short description: | p@chr21:46321607..46321655, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46321607..46321655, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-73 | 98 |
blood island | 1.26e-73 | 98 |
bone marrow | 9.30e-71 | 76 |
hemolymphoid system | 4.76e-65 | 108 |
bone element | 2.32e-64 | 82 |
skeletal element | 3.76e-57 | 90 |
immune system | 8.57e-57 | 93 |
skeletal system | 9.32e-50 | 100 |
lateral plate mesoderm | 9.00e-26 | 203 |
musculoskeletal system | 3.60e-23 | 167 |
connective tissue | 7.73e-17 | 371 |
mesoderm | 2.20e-10 | 315 |
mesoderm-derived structure | 2.20e-10 | 315 |
presumptive mesoderm | 2.20e-10 | 315 |
blood | 2.42e-08 | 15 |
haemolymphatic fluid | 2.42e-08 | 15 |
organism substance | 2.42e-08 | 15 |