FFCP PHASE1:Hg19::chr9:120470472..120470490,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:120470472..120470490,+
|short_description=p9@TLR4
|description=CAGE_peak_9_at_TLR4_5end
|association_with_transcript=0bp_to_ENST00000490685_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490685_5end | |||
|cluster_id=chr9:120470472..120470490,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_TLR4_5end | |||
|id=chr9:120470472..120470490,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.71e-36!63;CL:0000576!1.71e-36!63;CL:0000040!1.71e-36!63;CL:0000559!1.71e-36!63;CL:0002057!2.34e-36!42;CL:0002009!7.29e-35!65;CL:0000860!5.11e-33!45;CL:0000766!2.13e-32!76;CL:0000839!3.30e-31!70;CL:0000557!1.54e-30!71;CL:0000763!1.11e-16!112;CL:0000049!1.11e-16!112;CL:0002087!8.45e-13!119;CL:0002031!1.01e-11!124;CL:0000738!6.00e-11!140;CL:0002032!2.89e-07!165;CL:0000837!2.89e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-82;33!CL:0002057;2.85e-82;33!CL:0000473;1.17e-71;39!CL:0000234;1.17e-71;39!CL:0000576;4.21e-39;48!CL:0000766;5.90e-27;69!CL:0000763;1.40e-15;100!CL:0002087;2.00e-10;104!CL:0000738;1.07e-08;136!CL:0002595;4.82e-08;5!CL:0000235;3.28e-07;6!CL:0000775;7.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.35e-81,48;CL:0000234,4.35e-81,48;CL:0000860,9.07e-76,42;CL:0002057,9.07e-76,42;CL:0002194,2.03e-63,59;CL:0000576,2.03e-63,59;CL:0000040,2.03e-63,59;CL:0000559,2.03e-63,59;CL:0002009,3.87e-61,61;CL:0000766,2.50e-58,72;CL:0000839,4.93e-56,66;CL:0000557,4.21e-55,67;CL:0000763,1.49e-36,108;CL:0000049,1.49e-36,108;CL:0002087,2.73e-29,115;CL:0002031,8.86e-28,120;CL:0000738,1.59e-27,136;CL:0002032,4.18e-22,161;CL:0000837,4.18e-22,161;CL:0000037,7.09e-21,168;CL:0000988,1.95e-19,177;CL:0000048,2.71e-09,427;CL:0000723,4.84e-09,433;CL:0000134,8.47e-09,354;CL:0000034,1.02e-08,441;CL:0002320,1.79e-08,361;CL:0002595,4.54e-08,5;CL:0000219,2.50e-07,386;CL:0000235,4.60e-07,6;CL:0000775,6.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.84e-56;42!CL:0000049;4.63e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.92e-27!80;UBERON:0001474!8.79e-24!86;UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0004765!6.61e-20!101;UBERON:0001434!6.61e-20!101;UBERON:0002405!3.74e-19!115;UBERON:0002193!4.33e-19!112;UBERON:0002204!2.29e-16!167;UBERON:0003081!1.52e-13!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.82e-08;5!UBERON:0001533;4.82e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.52e-51,76;UBERON:0001474,7.67e-47,82;UBERON:0004765,4.53e-42,90;UBERON:0002390,8.91e-41,98;UBERON:0003061,8.91e-41,98;UBERON:0002405,1.72e-40,93;UBERON:0001434,3.62e-37,100;UBERON:0002193,2.44e-36,108;UBERON:0002204,1.88e-27,167;UBERON:0003081,1.19e-22,203;UBERON:0000926,1.11e-11,315;UBERON:0004120,1.11e-11,315;UBERON:0006603,1.11e-11,315;UBERON:0002384,9.74e-09,371;UBERON:0003834,4.54e-08,5;UBERON:0001533,4.54e-08,5 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.446961094427288,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20326668482085,0,0.671746422719773,0,0.257575567634187,2.61716829803216,1.51150377475524,1.94067248950253,1.39457422143411,0.822335776043652,2.47765096716083,3.74000110018796,3.07392847834921,1.6553756092201,1.72372840368309,1.29096936716765,2.70852973188684,2.63539275359647,0.545812300115692,1.34834090667051,3.67300670845083,1.28371610830437,0,2.63881040149373,2.19410023383795,1.70489900213078,8.9964863974861,5.6738522469114,4.35975574296902,3.26623264833766,4.17186334736161,1.3031330682307,4.23779651843358,2.94622108790052,6.64571013625857,0.845021145247767,0,0,0.561643155732475,0,0.48217676009124,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,6.32501818449095,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,14.9580729602012,0.414415513436035,0,0,0,0.415941723061614,1.42743191037729,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.532685175939381,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14499909393593,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0,1.99031692572366,1.31535265576129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,0.661983911750998,0.627865836814451,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0.686520205190771,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0.169927114687817,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.446961094427288,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20326668482085,0,0.671746422719773,0,0.257575567634187,2.61716829803216,1.51150377475524,1.94067248950253,1.39457422143411,0.822335776043652,2.47765096716083,3.74000110018796,3.07392847834921,1.6553756092201,1.72372840368309,1.29096936716765,2.70852973188684,2.63539275359647,0.545812300115692,1.34834090667051,3.67300670845083,1.28371610830437,0,2.63881040149373,2.19410023383795,1.70489900213078,8.9964863974861,5.6738522469114,4.35975574296902,3.26623264833766,4.17186334736161,1.3031330682307,4.23779651843358,2.94622108790052,6.64571013625857,0.845021145247767,0,0,0.561643155732475,0,0.48217676009124,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,6.32501818449095,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,14.9580729602012,0.414415513436035,0,0,0,0.415941723061614,1.42743191037729,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.532685175939381,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14499909393593,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0,1.99031692572366,1.31535265576129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,0.661983911750998,0.627865836814451,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0.686520205190771,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0.169927114687817,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p9@TLR4 | |||
}} | }} |
Latest revision as of 18:54, 24 September 2015
Short description: | p9@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TLR4_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 0bp_to_ENST00000490685_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.52e-51 | 76 |
bone element | 7.67e-47 | 82 |
skeletal element | 4.53e-42 | 90 |
hematopoietic system | 8.91e-41 | 98 |
blood island | 8.91e-41 | 98 |
immune system | 1.72e-40 | 93 |
skeletal system | 3.62e-37 | 100 |
hemolymphoid system | 2.44e-36 | 108 |
musculoskeletal system | 1.88e-27 | 167 |
lateral plate mesoderm | 1.19e-22 | 203 |
mesoderm | 1.11e-11 | 315 |
mesoderm-derived structure | 1.11e-11 | 315 |
presumptive mesoderm | 1.11e-11 | 315 |
connective tissue | 9.74e-09 | 371 |
thoracic segment blood vessel | 4.54e-08 | 5 |
subclavian artery | 4.54e-08 | 5 |