FFCP PHASE1:Hg19::chr9:120466184..120466189,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:120466184..120466189,+
|short_description=p11@TLR4
|description=CAGE_peak_11_at_TLR4_5end
|association_with_transcript=-270bp_to_NM_138554,NR_024168,NR_024...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt=D1CS53,O00206 | |UniProt=D1CS53,O00206 | ||
|association_with_transcript=-270bp_to_NM_138554,NR_024168,NR_024169,uc004bjz.2,uc004bka.2,uc004bkb.2_5end | |||
|cluster_id=chr9:120466184..120466189,+ | |||
|description=CAGE_peak_11_at_TLR4_5end | |||
|id=chr9:120466184..120466189,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.47e-19;4!CL:0002222;2.47e-19;4!CL:0002224;2.47e-19;4!CL:0000319;3.25e-19;1!CL:0000359;5.13e-13;32!CL:0000159;2.72e-10;2!CL:0002589;2.72e-10;2!CL:0000192;8.61e-10;43!CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3!CL:0002590;2.79e-07;3!CL:0002592;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.26e-19,4;CL:0002222,2.26e-19,4;CL:0002224,2.26e-19,4;CL:0000319,3.91e-19,1;CL:0000359,4.11e-14,32;CL:0000192,1.58e-10,43;CL:0000514,1.58e-10,43;CL:0000159,2.99e-10,2;CL:0002589,3.27e-10,2;CL:0000187,3.06e-08,55;CL:0000680,8.15e-08,58;CL:0000056,8.15e-08,58;CL:0000355,8.15e-08,58;CL:0000393,1.97e-07,61;CL:0000211,1.97e-07,61;CL:0002590,2.47e-07,3;CL:0000064,2.79e-07,3;CL:0000067,2.79e-07,3;CL:0005012,2.79e-07,3;CL:0002304,2.79e-07,3;CL:0002592,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;8.61e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.91e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.30e-19;1!UBERON:0010077;2.47e-19;4!UBERON:0005389;2.47e-19;4!UBERON:0000484;2.47e-19;4!UBERON:0000965;2.47e-19;4!UBERON:0001803;2.47e-19;4!UBERON:0007625;1.52e-15;11!UBERON:0001801;2.34e-12;14!UBERON:0001529;2.72e-10;2!UBERON:0007204;2.72e-10;2!UBERON:0000019;2.89e-09;19!UBERON:0000047;2.89e-09;19!UBERON:0004088;2.89e-09;19!UBERON:0010230;2.89e-09;19!UBERON:0000970;7.86e-09;20!UBERON:0002104;1.95e-08;21!UBERON:0001456;1.95e-08;21!UBERON:0000020;9.44e-08;23!UBERON:0006876;1.84e-07;11!UBERON:0001032;1.89e-07;24!UBERON:0004456;1.89e-07;24!UBERON:0003498;2.79e-07;3!UBERON:0005985;2.79e-07;3!UBERON:0001778;2.79e-07;3!UBERON:0001621;2.79e-07;3!UBERON:0001775;2.79e-07;3!UBERON:0001637;5.62e-07;42!UBERON:0003509;5.62e-07;42!UBERON:0004572;5.62e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.56e-19,1;UBERON:0010077,2.26e-19,4;UBERON:0005389,2.26e-19,4;UBERON:0000484,2.26e-19,4;UBERON:0002546,2.26e-19,4;UBERON:0000965,2.26e-19,4;UBERON:0001803,2.26e-19,4;UBERON:0003073,2.26e-19,4;UBERON:0005426,2.26e-19,4;UBERON:0007625,1.45e-15,11;UBERON:0001801,2.26e-12,14;UBERON:0001529,3.27e-10,2;UBERON:0007204,3.27e-10,2;UBERON:0000076,3.52e-10,8;UBERON:0004573,4.92e-09,33;UBERON:0004571,4.92e-09,33;UBERON:0000019,7.66e-09,20;UBERON:0000047,7.66e-09,20;UBERON:0010312,7.66e-09,20;UBERON:0004088,7.66e-09,20;UBERON:0010230,7.66e-09,20;UBERON:0003072,7.66e-09,20;UBERON:0004128,7.66e-09,20;UBERON:0003071,7.66e-09,20;UBERON:0000970,1.90e-08,21;UBERON:0002104,1.90e-08,21;UBERON:0002049,3.87e-08,78;UBERON:0007798,3.87e-08,78;UBERON:0001456,4.34e-08,22;UBERON:0006876,1.73e-07,11;UBERON:0000020,1.84e-07,24;UBERON:0001032,1.84e-07,24;UBERON:0004456,1.84e-07,24;UBERON:0001134,2.60e-07,62;UBERON:0002036,2.60e-07,62;UBERON:0003082,2.60e-07,62;UBERON:0001778,2.79e-07,3;UBERON:0001775,2.79e-07,3;UBERON:0001621,3.35e-07,3;UBERON:0001637,3.71e-07,42;UBERON:0003509,3.71e-07,42;UBERON:0004572,3.71e-07,42;UBERON:0002385,4.40e-07,64;UBERON:0001015,4.40e-07,64;UBERON:0000383,4.40e-07,64 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,1.33037638477538,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.662045904066094,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0.772921620136887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,2.88662684050547,0,4.46153038096122,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,1.59691809095107,0,0,1.14499909393593,0,0,1.71567174531442,0,0,0,0,0,0,0.117812402345686,1.01091240786658,0,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0.66343897524122,2.63070531152258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.561111741760736,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0.856402095563933,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,1.33037638477538,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.662045904066094,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0.772921620136887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,2.88662684050547,0,4.46153038096122,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,1.59691809095107,0,0,1.14499909393593,0,0,1.71567174531442,0,0,0,0,0,0,0.117812402345686,1.01091240786658,0,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0.66343897524122,2.63070531152258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.561111741760736,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@TLR4 | |||
}} | }} |
Latest revision as of 18:45, 24 September 2015
Short description: | p11@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TLR4_5end |
Coexpression cluster: | NA |
Association with transcript: | -270bp_to_NM_138554, NR_024168, NR_024169, uc004bjz.2, uc004bka.2, uc004bkb.2_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | D1CS53O00206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.26e-19 | 4 |
vertebrate lens cell | 2.26e-19 | 4 |
lens epithelial cell | 2.26e-19 | 4 |
mucus secreting cell | 3.91e-19 | 1 |
vascular associated smooth muscle cell | 4.11e-14 | 32 |
smooth muscle cell | 1.58e-10 | 43 |
smooth muscle myoblast | 1.58e-10 | 43 |
seromucus secreting cell | 2.99e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 3.27e-10 | 2 |
muscle cell | 3.06e-08 | 55 |
muscle precursor cell | 8.15e-08 | 58 |
myoblast | 8.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.15e-08 | 58 |
electrically responsive cell | 1.97e-07 | 61 |
electrically active cell | 1.97e-07 | 61 |
smooth muscle cell of the brain vasculature | 2.47e-07 | 3 |
ciliated cell | 2.79e-07 | 3 |
ciliated epithelial cell | 2.79e-07 | 3 |
multi-ciliated epithelial cell | 2.79e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.79e-07 | 3 |
smooth muscle cell of the coronary artery | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.91e-19 | 1 |