FFCP PHASE1:Hg19::chr20:19869819..19869845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-173bp_to_ENST00000459721_5end | |||
|cluster_id=chr20:19869819..19869845,+ | |||
|description=CAGE_peak_13_at_RIN2_5end | |||
|id=chr20:19869819..19869845,+ | |||
|ontology_enrichment_celltype=CL:0000222!9.42e-17!119;CL:0000359!3.30e-10!32;CL:0000183!8.11e-10!59;CL:0000192!9.75e-10!42;CL:0000514!9.75e-10!42;CL:0000187!1.10e-09!54;CL:0000680!4.43e-09!57;CL:0000056!4.43e-09!57;CL:0000355!4.43e-09!57;CL:0000220!1.15e-08!246;CL:0002321!2.41e-08!248;CL:0000213!4.26e-08!57;CL:0000215!4.26e-08!57;CL:0002139!6.57e-08!24;CL:0002539!1.54e-07!10;CL:0000393!1.98e-07!60;CL:0000211!1.98e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.23e-12;32!CL:0002539;8.28e-09;10!CL:0002139;1.13e-08;24!CL:0000192;2.04e-08;43!CL:0000213;4.68e-07;58!CL:0000215;4.68e-07;58!CL:0000115;6.95e-07;36!CL:0000071;8.30e-07;18!CL:0000708;8.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.46e-14,121;CL:0000359,8.12e-13,32;CL:0000192,6.66e-11,43;CL:0000514,6.66e-11,43;CL:0000213,3.14e-09,58;CL:0000215,3.14e-09,58;CL:0002539,6.86e-09,10;CL:0002139,1.07e-08,24;CL:0000187,1.60e-07,55;CL:0000708,5.40e-07,3;CL:0000115,5.41e-07,36;CL:0000680,6.58e-07,58;CL:0000056,6.58e-07,58;CL:0000355,6.58e-07,58;CL:0002582,8.59e-07,3;CL:0000071,9.82e-07,18;CL:0002546,9.82e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-08;43!CL:0002546;8.30e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!4.97e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.28e-11;14!DOID:120;1.76e-07;27!DOID:193;8.66e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.68e-11,14;DOID:120,1.31e-07,27;DOID:193,6.62e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.50e-19!84;UBERON:0000055!7.74e-19!69;UBERON:0001981!2.78e-18!60;UBERON:0007500!2.78e-18!60;UBERON:0004537!2.78e-18!60;UBERON:0006965!2.78e-18!60;UBERON:0004111!3.91e-18!241;UBERON:0002049!5.53e-18!79;UBERON:0007798!5.53e-18!79;UBERON:0000119!2.01e-16!312;UBERON:0001637!3.80e-16!42;UBERON:0003509!3.80e-16!42;UBERON:0004572!3.80e-16!42;UBERON:0000477!2.24e-15!286;UBERON:0000483!3.64e-15!309;UBERON:0000025!9.23e-15!194;UBERON:0003914!1.29e-14!118;UBERON:0001009!2.30e-14!113;UBERON:0004535!7.29e-14!110;UBERON:0004573!1.46e-13!33;UBERON:0004571!1.46e-13!33;UBERON:0000481!5.75e-12!347;UBERON:0000490!2.99e-10!138;UBERON:0000947!1.39e-09!21;UBERON:0010191!1.39e-09!21;UBERON:0000467!6.11e-09!625;UBERON:0000480!8.23e-09!626;UBERON:0002385!1.17e-08!63;UBERON:0001015!1.17e-08!63;UBERON:0000383!1.17e-08!63;UBERON:0000475!1.52e-08!365;UBERON:0000486!3.63e-08!82;UBERON:0005256!4.23e-08!143;UBERON:0001134!5.14e-08!61;UBERON:0002036!5.14e-08!61;UBERON:0003082!5.14e-08!61;UBERON:0004290!5.76e-08!70;UBERON:0002100!1.50e-07!216;UBERON:0004237!1.54e-07!10;UBERON:0004695!1.54e-07!10;UBERON:0002111!1.54e-07!10;UBERON:0004178!1.54e-07!10;UBERON:0000914!1.78e-07!83;UBERON:0002329!1.78e-07!83;UBERON:0003077!1.78e-07!83;UBERON:0003059!1.78e-07!83;UBERON:0007282!1.78e-07!83;UBERON:0009618!1.78e-07!83;UBERON:0007285!1.78e-07!83;UBERON:0001135!2.58e-07!15;UBERON:0000468!3.29e-07!659;UBERON:0000992!6.03e-07!13;UBERON:0003104!6.05e-07!238;UBERON:0009142!6.05e-07!238;UBERON:0000923!7.10e-07!604;UBERON:0005291!7.10e-07!604;UBERON:0006598!7.10e-07!604;UBERON:0002532!7.10e-07!604;UBERON:0002050!9.19e-07!605;UBERON:0005423!9.19e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.90e-18;33!UBERON:0004571;1.90e-18;33!UBERON:0001637;8.72e-15;42!UBERON:0003509;8.72e-15;42!UBERON:0004572;8.72e-15;42!UBERON:0002118;3.15e-11;5!UBERON:0007500;6.25e-11;56!UBERON:0001981;6.25e-11;56!UBERON:0004537;6.25e-11;56!UBERON:0000947;1.78e-10;21!UBERON:0010191;1.78e-10;21!UBERON:0000992;1.57e-09;13!UBERON:0004237;8.28e-09;10!UBERON:0004695;8.28e-09;10!UBERON:0002111;8.28e-09;10!UBERON:0004178;8.28e-09;10!UBERON:0000055;2.21e-08;65!UBERON:0000487;3.60e-08;22!UBERON:0002049;1.81e-07;75!UBERON:0007798;1.81e-07;75!UBERON:0001135;2.58e-07;15!UBERON:0003914;5.84e-07;74!UBERON:0006914;6.52e-07;25!UBERON:0004638;8.30e-07;18!UBERON:0001986;8.30e-07;18!UBERON:0004852;8.30e-07;18!UBERON:0003210;8.40e-07;3!UBERON:0000991;8.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.51e-19,33;UBERON:0004571,1.51e-19,33;UBERON:0000055,1.90e-19,68;UBERON:0001637,4.39e-19,42;UBERON:0003509,4.39e-19,42;UBERON:0004572,4.39e-19,42;UBERON:0007500,1.16e-18,59;UBERON:0001981,1.16e-18,59;UBERON:0004537,1.16e-18,59;UBERON:0006965,1.16e-18,59;UBERON:0002049,5.10e-17,78;UBERON:0007798,5.10e-17,78;UBERON:0004872,2.47e-14,83;UBERON:0002118,1.99e-11,5;UBERON:0004535,1.99e-11,109;UBERON:0001009,6.92e-11,112;UBERON:0000947,1.65e-10,21;UBERON:0010191,1.65e-10,21;UBERON:0003914,4.51e-10,117;UBERON:0000992,1.15e-09,13;UBERON:0000490,6.64e-09,148;UBERON:0004237,6.86e-09,10;UBERON:0004695,6.86e-09,10;UBERON:0002111,6.86e-09,10;UBERON:0004178,6.86e-09,10;UBERON:0000487,4.20e-08,22;UBERON:0001135,2.25e-07,15;UBERON:0003210,5.40e-07,3;UBERON:0000991,7.10e-07,21;UBERON:0009196,7.10e-07,21;UBERON:0009117,7.10e-07,21;UBERON:0005564,7.10e-07,21;UBERON:0006914,7.42e-07,25;UBERON:0002385,9.09e-07,64;UBERON:0001015,9.09e-07,64;UBERON:0000383,9.09e-07,64;UBERON:0004638,9.82e-07,18;UBERON:0001986,9.82e-07,18;UBERON:0004852,9.82e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,2.6893005858071,1.20538905604795,1.46062018077475,1.95173119516203,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0.795285947051099,0,0.283604451492204,0.221729397462564,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,1.39133685156694,0,1.38856200643038,0.56530794192401,1.67799774483962,0.550236083880135,1.04497483268405,2.32575083252396,1.77883131343355,0.33472061276467,2.81980521976403,0,1.22031028774085,1.10298924103761,0.81014194788176,0.535798369704479,0,0.450445921933289,0,1.89853131913626,1.46561395144326,0,0,0,0.993943903390637,0.25326102332916,1.85372853138506,1.43418310374407,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0.311211035399766,0.67355336034844,0.980771418680752,0.454072282934794,0,0,2.80944069147288,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.125118519871964,0,0,0,0.901428353439581,0.340296549480063,0,0,0,0.900273288253207,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0.193260853163297,0.818238361772504,0,0,0,0.116193942869518,0,0,0,3.12899064659632,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,1.20097467208968,0.219500570817251,0,0,0,0,0,0,0.695582429850461,0.234817388471643,1.58803092537181,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0.992425680696705,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90622843387113,2.61576041299968,2.42016343209135,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,2.71295439353627,0.871533458600294,2.7992437530976,0,0,0,0.479249710983165,0,0,0,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.35142424497814,0.300946099727719,0,0,0,0,0.260650843404249,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,2.31314540703983,1.24293207719189,1.72467027628999,4.15403543346897,1.51073491997947,0,0.802025881213139,0.184161977871793,0.803701137152247,1.0925470080403,1.31124414959424,0,0,0,0,0.316654886678627,0,1.70093705276516,0.647747748306418,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,4.82051789532479,0.386682873168488,0.616194468458578,0.307007349452259,0.413509717453592,0.107420244868274,0,0.426133137080504,0.445160178233687,0.495854746082934,0,0.638063562472921,0.10115778085555,2.32422774648643,0.94443704049192,1.3940745403212,2.7723022215848,0.532306030317022,0.869932992075073,2.03856641014312,1.00187420719394,0.372158369359667,0,0,0,0,1.27281299170375,1.56989728039846,0.179872457583315,0.274537029736055,0,1.01091240786658,1.58510321173008,2.10629228119491,0,1.21856744815642,0,1.77449884830381,1.1312434556297,0,1.65409603063837,0,0.438450885253763,0.578775534266688,0,0.608731130888112,0.92947049429925,1.40847801266121,0.286822704408103,0,0.35667105148125,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,1.42068073403207,0,0,0,0,0.281338832821026,2.11486539543521,0,0,0,0.828851746593443,0,0.20453736500431,0,0.311039587661807,0.269605053441981,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.384751292518985,0.113942055847001,0.23056390438806,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,1.99052386215701,4.15750553165694,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,5.98188485436467,6.28884716163448,5.33685961292283,4.77889719091835,0.569219092059585,6.51770963161752,0,0.0979923974143777,0,0.52418000472609,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,2.32971271899477,0.397429223405979,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0,0,0,0.288109595976299,3.35481846026668,0.471388069233591,1.08723364858891,0.313808538937,0.101998217636322,0,2.40168115483916,0.547621515567972,0,0.859530882839914,0,0.837847203816763,0.229160424011684,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.604651252380536,0.720599767084807,0,0,0,0,2.85439696392771,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,1.27134268827375,0,2.5926644736038,0.326587360109409,0,0,0,0.453248366080503,0.146552233678082,1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| |||
|short_description=p13@RIN2 | |||
}} |
Latest revision as of 16:07, 24 September 2015
Short description: | p13@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000459721_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.46e-14 | 121 |
vascular associated smooth muscle cell | 8.12e-13 | 32 |
smooth muscle cell | 6.66e-11 | 43 |
smooth muscle myoblast | 6.66e-11 | 43 |
lining cell | 3.14e-09 | 58 |
barrier cell | 3.14e-09 | 58 |
aortic smooth muscle cell | 6.86e-09 | 10 |
endothelial cell of vascular tree | 1.07e-08 | 24 |
muscle cell | 1.60e-07 | 55 |
leptomeningeal cell | 5.40e-07 | 3 |
endothelial cell | 5.41e-07 | 36 |
muscle precursor cell | 6.58e-07 | 58 |
myoblast | 6.58e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.58e-07 | 58 |
visceral preadipocyte | 8.59e-07 | 3 |
blood vessel endothelial cell | 9.82e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.82e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.68e-11 | 14 |
female reproductive organ cancer | 1.31e-07 | 27 |
reproductive organ cancer | 6.62e-07 | 29 |