FFCP PHASE1:Hg19::chr1:26317321..26317401,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8579 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_DQ892796,DQ896043_5end | |||
|cluster_id=chr1:26317321..26317401,- | |||
|coexpression_cluster_id=C1622 | |||
|description=CAGE_peak_2_at_PAFAH2_5end | |||
|id=chr1:26317321..26317401,- | |||
|ontology_enrichment_celltype=CL:0000791!8.59e-20!18;CL:0000789!8.59e-20!18;CL:0002420!8.59e-20!18;CL:0002419!8.59e-20!18;CL:0000790!8.59e-20!18;CL:0000084!8.87e-18!25;CL:0000827!8.87e-18!25;CL:0000037!9.25e-18!172;CL:0000566!9.25e-18!172;CL:0000988!1.73e-15!182;CL:0002032!7.50e-14!165;CL:0000837!7.50e-14!165;CL:0000625!9.78e-14!11;CL:0000738!4.06e-12!140;CL:0002031!9.68e-09!124;CL:0000838!2.78e-08!52;CL:0000542!5.58e-08!53;CL:0000051!5.58e-08!53;CL:0002087!3.36e-07!119;CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5;CL:0000763!5.58e-07!112;CL:0000049!5.58e-07!112;CL:0000624!7.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.25e-33;18!CL:0000789;9.25e-33;18!CL:0002419;9.25e-33;18!CL:0000084;2.81e-31;25!CL:0000625;8.13e-25;11!CL:0000097;5.65e-12;5!CL:0000542;3.65e-09;53!CL:0000623;1.24e-08;3!CL:0000784;1.85e-08;3!CL:0000624;1.97e-08;6!CL:0000767;6.41e-08;3!CL:0000226;2.73e-07;3!CL:0000842;2.73e-07;3!CL:0000898;5.76e-07;3!CL:0002144;8.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.11e-33,18;CL:0000789,8.11e-33,18;CL:0002420,8.11e-33,18;CL:0002419,8.11e-33,18;CL:0000790,8.11e-33,18;CL:0000084,2.43e-31,25;CL:0000827,2.43e-31,25;CL:0000625,8.06e-25,11;CL:0000738,2.62e-19,136;CL:0000037,7.68e-19,168;CL:0000838,3.03e-17,52;CL:0000988,3.21e-17,177;CL:0000542,8.52e-17,53;CL:0000051,8.52e-17,53;CL:0002032,7.25e-14,161;CL:0000837,7.25e-14,161;CL:0000097,5.53e-12,5;CL:0002028,5.53e-12,5;CL:0002031,1.75e-11,120;CL:0002087,2.80e-10,115;CL:0000623,1.23e-08,3;CL:0000825,1.23e-08,3;CL:0000624,1.70e-08,6;CL:0000784,1.80e-08,3;CL:0000767,5.99e-08,3;CL:0000226,2.59e-07,3;CL:0000842,2.59e-07,3;CL:0000898,5.41e-07,3;CL:0002144,7.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.25e-33;18!CL:0000051;3.65e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.87e-15!115;UBERON:0000178!1.68e-10!15;UBERON:0000179!1.68e-10!15;UBERON:0000463!1.68e-10!15;UBERON:0002193!4.58e-10!112;UBERON:0002390!1.11e-07!102;UBERON:0003061!1.11e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.81e-20;15!UBERON:0000179;6.81e-20;15!UBERON:0000463;6.81e-20;15!UBERON:0002390;2.62e-13;32!UBERON:0002193;2.27e-12;42!UBERON:0004177;1.19e-07;5!UBERON:0005057;1.19e-07;5!UBERON:0010523;8.99e-07;3!UBERON:0001915;8.99e-07;3!UBERON:0001982;8.99e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.70e-20,15;UBERON:0000179,6.70e-20,15;UBERON:0000463,6.70e-20,15;UBERON:0002193,4.07e-13,108;UBERON:0004177,5.10e-11,7;UBERON:0005057,5.10e-11,7;UBERON:0002390,2.61e-10,98;UBERON:0003061,2.61e-10,98;UBERON:0002370,7.93e-10,4;UBERON:0005058,7.93e-10,4;UBERON:0009113,7.93e-10,4;UBERON:0003295,7.93e-10,4;UBERON:0005562,7.93e-10,4;UBERON:0010523,7.93e-07,3;UBERON:0001915,7.93e-07,3;UBERON:0001982,7.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5876568591649,24.9489108763188,4.79929982279836,0,0,0,0,0,0.293600439334847,3.87796785972314,3.40925560699241,5.859293509328,0.447830948479849,1.29557466407592,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,4.48406850385229,0.790152254325231,2.16380747125216,1.57204305099666,0.822405995998037,13.7092926220356,3.58514493296949,3.31413464014313,0,12.5893816280246,3.82987679717288,2.87994062958707,4.33286182024025,7.81357050326618,6.63302672555379,8.05745732558013,8.29050053357545,12.4615326866073,4.59688345802387,4.81573490561484,5.22677619024884,6.68525121915641,5.3650869104269,4.46715679127419,3.03623630423403,7.32700452945422,9.76625180784628,12.3558765778289,9.78738274005523,8.95906278080929,16.240994451805,12.7859716103769,13.9591759476578,10.4835506476861,16.0464117470104,8.83428863685074,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.72038491523742,0,0,0.324547393654683,0,0,20.0332124416487,15.4438625910635,16.3441300585009,0,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,2.41697590265488,6.84244895146661,1.46437234528902,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,10.153651286537,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,3.70388410061289,4.37584550139576,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,23.2447865794917,12.0250307013648,9.94427678577034,12.7504857760644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.99972991182057,0,0,0,0,0,0,0,0,0,2.01753259188349,28.1753987088756,23.9346608094064,25.5402642196699,0,0,0,0,0,0,8.97484377612075,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,6.03999762292127,5.97674323699288,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.522870902049801,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,14.2085330585007,9.94028369285088,11.9625909306574,12.388052323805,5.34770955012053,8.43015304550532,11.8806916192385,7.9312517629427,0,0,0,0,0,12.2363970559272,1.91311527274587,1.1974762285969,0.766021480529467,0.423347165447766,0.649243880549111,1.12318871245384,0,0.626719583092093,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,1.9538809540204,0,0,0.270455678475983,0.66614393599564,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0.23056390438806,0,0,0,0.0915975934018623,0,5.10966490978682,0,0.997270091400938,0,0,0,0.189753732724185,1.11255605286265,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0.443175571691151,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.492555124496034,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.628817220398664,1.24271716604159,1.48849806543585,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.786329709279482,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0,0,0,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0.235676547101626,0,0,0,0,1.12780701575824,3.02952073475813,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,1.42838658878244,66.0098658523982,62.1367890101538,0,0.0636471582781649,0,0.435433495793923,0,1.27968900727716,0.143444410785353,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,9.862415885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| |||
|short_description=p2@PAFAH2 | |||
}} |
Latest revision as of 04:28, 17 September 2015
Short description: | p2@PAFAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAFAH2_5end |
Coexpression cluster: | C1622_thymus_CD8_Natural_vein_blood_acute_Basophils |
Association with transcript: | -14bp_to_DQ892796, DQ896043_5end |
EntrezGene: | PAFAH2 |
HGNC: | 8579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.11e-33 | 18 |
alpha-beta T cell | 8.11e-33 | 18 |
immature T cell | 8.11e-33 | 18 |
mature T cell | 8.11e-33 | 18 |
immature alpha-beta T cell | 8.11e-33 | 18 |
T cell | 2.43e-31 | 25 |
pro-T cell | 2.43e-31 | 25 |
CD8-positive, alpha-beta T cell | 8.06e-25 | 11 |
leukocyte | 2.62e-19 | 136 |
hematopoietic stem cell | 7.68e-19 | 168 |
lymphoid lineage restricted progenitor cell | 3.03e-17 | 52 |
hematopoietic cell | 3.21e-17 | 177 |
lymphocyte | 8.52e-17 | 53 |
common lymphoid progenitor | 8.52e-17 | 53 |
hematopoietic oligopotent progenitor cell | 7.25e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.25e-14 | 161 |
mast cell | 5.53e-12 | 5 |
basophil mast progenitor cell | 5.53e-12 | 5 |
hematopoietic lineage restricted progenitor cell | 1.75e-11 | 120 |
nongranular leukocyte | 2.80e-10 | 115 |
natural killer cell | 1.23e-08 | 3 |
pro-NK cell | 1.23e-08 | 3 |
CD4-positive, alpha-beta T cell | 1.70e-08 | 6 |
plasmacytoid dendritic cell | 1.80e-08 | 3 |
basophil | 5.99e-08 | 3 |
single nucleate cell | 2.59e-07 | 3 |
mononuclear cell | 2.59e-07 | 3 |
naive T cell | 5.41e-07 | 3 |
capillary endothelial cell | 7.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.70e-20 | 15 |
haemolymphatic fluid | 6.70e-20 | 15 |
organism substance | 6.70e-20 | 15 |
hemolymphoid system | 4.07e-13 | 108 |
hemopoietic organ | 5.10e-11 | 7 |
immune organ | 5.10e-11 | 7 |
hematopoietic system | 2.61e-10 | 98 |
blood island | 2.61e-10 | 98 |
thymus | 7.93e-10 | 4 |
hemolymphoid system gland | 7.93e-10 | 4 |
thymic region | 7.93e-10 | 4 |
pharyngeal gland | 7.93e-10 | 4 |
thymus primordium | 7.93e-10 | 4 |
microcirculatory vessel | 7.93e-07 | 3 |
endothelium of capillary | 7.93e-07 | 3 |
capillary | 7.93e-07 | 3 |