FFCP PHASE1:Hg19::chr1:25291620..25291635,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |||
|TSSclassifier=strong | |||
|UniProt=O14814 | |||
|association_with_transcript=-8bp_to_ENST00000479341,uc009vrl.1_5end | |||
|cluster_id=chr1:25291620..25291635,- | |||
|description=CAGE_peak_4_at_RUNX3_5end | |||
|id=chr1:25291620..25291635,- | |||
|ontology_enrichment_celltype=CL:0000037!5.56e-48!172;CL:0000566!5.56e-48!172;CL:0000988!7.48e-47!182;CL:0002032!1.71e-45!165;CL:0000837!1.71e-45!165;CL:0000738!1.82e-45!140;CL:0002087!6.26e-44!119;CL:0002031!5.00e-40!124;CL:0002057!2.73e-27!42;CL:0000860!1.36e-24!45;CL:0000763!9.01e-23!112;CL:0000049!9.01e-23!112;CL:0000542!1.07e-21!53;CL:0000051!1.07e-21!53;CL:0002009!4.07e-21!65;CL:0000838!5.26e-21!52;CL:0002194!1.78e-19!63;CL:0000576!1.78e-19!63;CL:0000040!1.78e-19!63;CL:0000559!1.78e-19!63;CL:0000557!4.58e-19!71;CL:0000839!4.40e-17!70;CL:0000766!1.48e-16!76;CL:0000084!2.07e-16!25;CL:0000827!2.07e-16!25;CL:0000134!2.21e-15!358;CL:0002320!1.90e-14!365;CL:0000219!1.65e-12!390;CL:0000791!3.16e-12!18;CL:0000789!3.16e-12!18;CL:0002420!3.16e-12!18;CL:0002419!3.16e-12!18;CL:0000790!3.16e-12!18;CL:0000625!2.26e-10!11;CL:0000048!6.16e-08!430;CL:0000723!1.94e-07!436;CL:0000034!8.31e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-44;33!CL:0002057;1.83e-44;33!CL:0000473;1.26e-29;39!CL:0000234;1.26e-29;39!CL:0000576;1.36e-21;48!CL:0002087;7.90e-15;104!CL:0000766;8.95e-12;69!CL:0000084;1.45e-09;25!CL:0000763;2.58e-09;100!CL:0000738;9.56e-09;136!CL:0000453;4.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,5.65e-39,161;CL:0000837,5.65e-39,161;CL:0000860,8.56e-39,42;CL:0002057,8.56e-39,42;CL:0000037,4.24e-38,168;CL:0000988,1.25e-36,177;CL:0002087,8.33e-36,115;CL:0002031,2.05e-35,120;CL:0000738,5.14e-34,136;CL:0000473,8.41e-33,48;CL:0000234,8.41e-33,48;CL:0002009,3.84e-27,61;CL:0000763,4.39e-26,108;CL:0000049,4.39e-26,108;CL:0002194,1.89e-24,59;CL:0000576,1.89e-24,59;CL:0000040,1.89e-24,59;CL:0000559,1.89e-24,59;CL:0000557,6.45e-24,67;CL:0000839,5.53e-21,66;CL:0000766,1.49e-18,72;CL:0000134,1.34e-14,354;CL:0002320,5.70e-14,361;CL:0000838,6.41e-12,52;CL:0000219,9.17e-12,386;CL:0000542,1.36e-11,53;CL:0000051,1.36e-11,53;CL:0000084,1.24e-09,25;CL:0000827,1.24e-09,25;CL:0000048,4.15e-09,427;CL:0000723,9.53e-09,433;CL:0000034,2.78e-08,441;CL:0000453,4.71e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-29;42!CL:0000049;5.52e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.93e-11!51;DOID:0060083!1.93e-11!51;DOID:1240!3.48e-09!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.82e-08,51;DOID:0060083,5.82e-08,51;DOID:1240,2.27e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.78e-25!102;UBERON:0003061!3.78e-25!102;UBERON:0002193!2.34e-23!112;UBERON:0001474!1.60e-16!86;UBERON:0002371!2.40e-15!80;UBERON:0004765!2.88e-14!101;UBERON:0001434!2.88e-14!101;UBERON:0002384!3.87e-14!375;UBERON:0002405!1.18e-13!115;UBERON:0004177!7.59e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.35e-07;3!UBERON:0004177;6.26e-07;5!UBERON:0005057;6.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.37e-25,98;UBERON:0003061,4.37e-25,98;UBERON:0002193,1.58e-24,108;UBERON:0002405,2.75e-24,93;UBERON:0001474,1.29e-22,82;UBERON:0002371,4.84e-20,76;UBERON:0004765,9.53e-20,90;UBERON:0001434,4.96e-18,100;UBERON:0002384,9.67e-14,371;UBERON:0002204,9.08e-08,167;UBERON:0004177,1.64e-07,7;UBERON:0005057,1.64e-07,7;UBERON:0003081,2.68e-07,203;UBERON:0002106,6.52e-07,3;UBERON:0004854,6.52e-07,3;UBERON:0009034,6.52e-07,3;UBERON:0002095,6.52e-07,3;UBERON:0004782,6.52e-07,3;UBERON:0003281,6.52e-07,3;UBERON:0009664,6.52e-07,3;UBERON:0002296,6.52e-07,3;UBERON:0005602,6.52e-07,3;UBERON:0001179,6.52e-07,3;UBERON:0006293,6.52e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,9.01678187825825,9.27736660784387,9.36658297632783,0,0.383829398097213,0.928896739896456,0,0,0,0,0.284338464974843,0,0,0.601633342410425,1.30206522429511,0,0,0,5.23433659606433,11.7141542543531,9.94594650870046,3.71886459049095,9.04569353648017,5.26500830521676,2.01384674625505,7.42866048934392,2.83778675866302,3.10271112662957,7.74581620300591,5.41705946377367,6.77672422353377,14.7369321031237,6.06753408001728,4.59125838556354,8.02322567690234,5.75403413219137,6.92687730392104,10.7710375115681,5.11469700639233,0.580418477257168,3.97169657283798,3.73693349397345,4.52247597462138,7.30076085788282,3.25783267057675,0.605399502633369,2.20966581592539,2.21523671208619,0.211255286311942,0,0.419317291016752,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,2.75393678159366,0.393010762749165,0.822405995998037,1.33749196312542,0,0,0,0.779873198196215,0,0,0.270803863765016,0.384273959177026,1.69077151827842,4.43982342429925,2.48715016007264,6.66547097190621,0.741432815810302,0.535081656179426,1.04535523804977,1.58633079776593,0.383220493601921,0.34362744548263,0.759059076058509,0.95569624297229,1.95325036156926,1.90090408889675,1.05402583354441,1.15187950038977,2.49861453104692,0.236777252044017,0.821127996921047,0.604820229674197,0.267440195783507,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,1.75591048352335,0,0.901428353439581,0,0.538168907066586,0.213557388818567,0,0,0,1.03056216018252,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06136407159222,0.394061520403854,0.215627574859517,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.413536052245775,0.215714200818617,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,4.67004270573551,3.4653989966647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,1.23408681925858,0,1.08006287447623,0,0,0,0,0.743212700502875,0,8.67930488850652,0.159426272728822,2.59453182862662,0.383010740264733,12.9120885461569,0,0,0.228234679033192,0,0,5.92521222305612,1.4452926759333,1.21079824314629,1.27753871307098,1.03051603426729,0.614481528616916,0.223676107892416,0.500547425135725,0.781552381608161,1.11362469558097,0,0,0.66614393599564,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,2.47205811340139,0,0.796991953004279,1.65770349318689,0,0,9.60061482596342,0,0,0,2.55786185113436,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.8837630767403,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.884575645033392,0,1.18608451472249,0.494255755786011,0.522109747527277,0.067401132980677,0,0,0.182454789215666,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,1.37041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.611989305817931,0.577901179803038,0,0,0,0,4.99485973130698,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,5.92713324460491,0,0,0,0,0,2.4747128070665,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0,0,0,0.640724475406168,0,0,1.9846640872478,9.28774669920338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7127920012698,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,1.32864840313363,5.88835419321039,0.655219697692825,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6397180036227,0,0.0752103283492573,1.0085253435176,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,12.0995686933568,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.389134845943,0.655678681511872,0,0.245148321753905,0,0,0.297046400327086,0,0,1.12780701575824,1.09578409555081,22.3868189271841,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.775066918032073,1.67601728598816,0,0,0.404234377916439,0,0,3.2328985447002,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,11.2198972306132 | |||
|short_description=p4@RUNX3 | |||
}} |
Latest revision as of 02:42, 17 September 2015
Short description: | p4@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RUNX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000479341, uc009vrl.1_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | O14814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.37e-25 | 98 |
blood island | 4.37e-25 | 98 |
hemolymphoid system | 1.58e-24 | 108 |
immune system | 2.75e-24 | 93 |
bone element | 1.29e-22 | 82 |
bone marrow | 4.84e-20 | 76 |
skeletal element | 9.53e-20 | 90 |
skeletal system | 4.96e-18 | 100 |
connective tissue | 9.67e-14 | 371 |
musculoskeletal system | 9.08e-08 | 167 |
hemopoietic organ | 1.64e-07 | 7 |
immune organ | 1.64e-07 | 7 |
lateral plate mesoderm | 2.68e-07 | 203 |
spleen | 6.52e-07 | 3 |
gastrointestinal system mesentery | 6.52e-07 | 3 |
stomach region | 6.52e-07 | 3 |
mesentery | 6.52e-07 | 3 |
gastrointestinal system serosa | 6.52e-07 | 3 |
mesentery of stomach | 6.52e-07 | 3 |
gut mesentery | 6.52e-07 | 3 |
dorsal mesentery | 6.52e-07 | 3 |
dorsal mesogastrium | 6.52e-07 | 3 |
peritoneal cavity | 6.52e-07 | 3 |
spleen primordium | 6.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.82e-08 | 51 |
immune system cancer | 5.82e-08 | 51 |
leukemia | 2.27e-07 | 39 |