FFCP PHASE1:Hg19::chr1:246887360..246887371,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24275 | |||
|TSSclassifier=strong | |||
|UniProt=E9PEA8,Q8NBX0 | |||
|association_with_transcript=-6bp_to_ENST00000366509,NM_016002,uc001ibr.2_5end | |||
|cluster_id=chr1:246887360..246887371,+ | |||
|coexpression_cluster_id=C3958 | |||
|description=CAGE_peak_4_at_SCCPDH_5end | |||
|id=chr1:246887360..246887371,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.75e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.66e-18;9!UBERON:0001557;5.66e-18;9!UBERON:0002298;1.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.96e-18,9;UBERON:0002298,6.72e-08,6;UBERON:0001557,2.81e-07,19 | |||
|phase1_expression=0,3.42560838225573,0.845726424575827,0,0,0,0,0,0.783556884599516,0,0,0.655324116390517,1.05506791291381,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,10.6208354749204,0,1.08371286321253,0,0,0.369754010166788,0,0,1.17440175733939,0,0,0.217010870715852,0.895661896959697,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,1.0843174571537,0.50133791063589,1.59331170856906,0,0,0.0945348171640679,0,0.263504357079378,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0.825354125820202,0.417989933073621,0.516833518338658,0.35576626268671,0.33472061276467,0,0,1.22031028774085,0,0,0.714397826272638,1.12264686313085,0.563057402416611,0,2.84779697870439,1.28241220751285,0,0,0,0,0.379891534993739,0,0,0.709336764396714,0,0,0.49333509683432,0,0,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.469737994575059,0,0.280901613404497,0,0.368502951935304,0,0,0.494533858557114,0,0,0.505008341862199,0.125118519871964,0,1.31693286264251,0.30648779579902,0.901428353439581,0,0.89694817844431,0.427114777637135,0.423863802319124,0,0.309157587715317,0,0.744467425326359,0.337552664482532,0.0974370051611986,0.504867548488229,0.644349290496095,0.484938170456436,0,0.302256294682921,0.67824236924195,0,0,0.573609190778008,0.243947412259191,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,7.09840800239063,11.4637589253109,6.50729780685401,6.17646247301406,6.75426276686459,7.35538919244399,10.651673344653,7.06397274451246,8.0796902958742,0,0,0,0,17.7457048750563,2.94848165003288,2.36315962672562,0,0.614942192715568,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0.579652024875384,0.117408694235822,0.721832238805369,0.462985512576611,0.380508304469197,5.53143078571493,5.15091697256924,0.246217006087397,0.468008530278475,0.297262324577456,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0,0.144119953416961,0.25248486685276,1.39695367442772,1.52795370223311,0,1.71072446022705,1.02827492703324,1.20137223137567,1.42913216315289,0.560655421726804,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,2.08014873822732,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,1.00451418286425,0,1.4377491329495,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,1.45579603071565,0.535286966391485,1.10391690523754,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.695068915744663,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,1.53512174720011,0.482561763430822,0,0.462629081407967,0.177561725313127,0.328508624055237,0,0.348631135379878,0.846016147141356,0.40101294060657,0.0920809889358963,0.459257792658427,0.910455840033585,0.393373244878272,0.451199612907412,0.308061348417659,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,4.84264918785573,3.3243040357149,1.34324852833307,0,0.261435451024901,0.256450125116389,0.656029291399411,0.976135183992909,4.12164046590889,0,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0.275673144969061,0.107420244868274,0.435050081742686,0.852266274161009,0.623224249527161,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,2.32218398827431,1.31717957183961,0.379473173765715,0.699869440489966,0,0,1.08890984861323,4.23647103495506,0,0,0.443430153536676,0.459446800413919,1.01489521846434,0.764637207142375,0.569647187174163,0.952927101831156,0,0,0,0,0.534120355637366,0,1.96032172784825,0.371606350251437,0.28853842595289,0.569134746787313,1.11598390910176,0.199579371432817,1.1490322207942,1.05836791361941,4.22008522356922,1.12318871245384,1.36940807419915,0.94007937463814,0,0.677167111206413,0.642352300414798,1.21079824314629,0,0.343505344755765,0.921722292925374,0.894704431569664,0.834245708559542,2.34465714482448,0.556812347790485,1.23087398947712,0.811367035427949,0.99921590399346,0,0.18714054040822,1.02555725490326,0.242721043499027,0,0.284136146806413,0.71623345421307,5.3453642549875,0.921482106297696,0,0.140669416410513,0.890469640183247,1.48323486804084,0,0,0.276283915531148,0.251932747854276,0.409074730008619,0,0.622079175323615,0.179736702294654,0.179021174675609,0,0.690503839458535,0,0,0.969332746095218,0.371072392647405,0,0.7812832832557,1.22443999994674,0,0,0.508507300585533,0,0,0,1.04174996959975,0.885741385813839,0,0,0.331737779793674,0.295547618953547,0,1.52513848926586,0.139423744278603,0.307801034015188,2.62066728448103,0,0,0,4.14701507651495,5.95384357112105,1.06606955203727,1.02193298195737,0.784901281975124,0.166211681900156,0.225595660617181,0.19606253431774,0,0.569261198172555,0.635746315921515,0.843992258112108,0.489698424477443,0.141353071433941,0.432777279484182,0,0.353830258013357,0,0,0.123563938946503,0.208843899010911,2.15683625538167,0.802577647298789,0.234264445725339,0.729819156862664,0,0.485560759068186,0,0,0.61214552326098,0.379119477770928,0.300646838828985,0.518440956986236,0,0,0,0,0.284609546029793,0.832048038078832,0.347119476670262,0.195984794828755,0,0,0.51595809741485,0.0967563312890851,0,0,0.484945082442097,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.633107959558787,0.586654148204409,0.240476460754601,0,0.19980960958213,0.144090417154106,0.687219576995494,0.343189995723929,0,0.124252535565433,0,0.407712618220842,0.627617077873999,0.407992870545287,0,0.600420288709789,2.19048606227189,1.27746588066972,0,0,0,0.458320848023367,0.717873024576814,0.599037001496973,0,0.446342914883745,0.201550417460179,0.720599767084807,0,1.02418136999391,1.81314888438566,1.41547442093788,0.393709926058995,0.254019996197353,0,0,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0.182248669974074,0,0.472834243795189,0.786818822024972,0.105600336519406,39.4432146532259,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0,0,0,0.340776043570843,0,2.19828350517124,5.30027555648885,1.68067843270016,4.09921065402339,0,0,0.320362237703084,0,0,0,0,0.121792598380896,0,1.08803560673895,2.2562090462043,0.306345576763462,0.983617892129413,0.471162288750703,0,0.244052529803926,0,0,6.54481404067428,2.54595252059672,0.276697269872462,0.624902039810533,1.36484205787483,1.99825733481477,0.705797459094515,0.936669811613763,0.434763085832475,0.597019211547496,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.310874401165561,0,0.318593534327405,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0.521988583930423,0.680117776536817,0.694567422971502,0.244736704506468,1.25362188757041,9.57284486199014,0,0.530067437837643,0,0.168942440653073,1.02496607435179,12.7809226440543,0.607719912354764,0.553033744606923,0,0,0,0,0.737318726261158,0.211312123358627,0.39997479170986,0.640150378164845,0,1.13503190713367,0.184105950251841,0,0,0.255788742607303,0.539124056983409,0.786329709279482,0.436838552768056,0.509197589862076,1.2754495206101,0.123935764259002,0,0,1.02520268501629,2.40171224485641,1.05802783107205,0.3062454773532,0.192687675289379,0,0.638535436228605,0.41023272848151,0.504143392443436,0.207471757392654,0,1.42769420259154,0.0981477185010256,0.11796972334774,0,0.462102664601353,0.762764190934334,0,0.994581110581374,0.376051641746286,0,0,0,0.327543835020193,0,0.472763092328763,0.781078098613847,0,0.570742291745161,1.09394961803644,0,0,0.175871244359621,2.55524855279191,0,1.3451348888753,0,0,3.63679717666819,0.230467975111559,0,1.76721305739762,0.591954962065642,1.53651993149159,0.333694205676207,1.64835494986079,0,0.280272163313789,2.73947616152849,0,1.43325506366115,0.285906176706625,0.316027223465453,0.116241425368125,0,0,0,0.3414369541879,0,0,0.118332000730565,0,0.846774100381858,2.2910686854405,0,0,3.02009665854039,0.196300467230486,0,0,0.307988420568741,0,0.485710993059139,3.50909195193158,0.596852325484105,0.237840181555137,0.45178432815584,0.109940516745429,0.150962843566674,0.771741581079447,0.218559560503957,0,0.735444965261716,0,1.96308467114945,12.4759488137376,0.8453114551668,0.339854229375634,0.0939839179798536,0.128915775947154,0,0.178553938605658,0,0,0,0,3.44014999563483,0.473314686579554,0.407948941145488,0.872701380680755,1.0580536810308,1.48798007266701,0.924351257262837,0,0,0.218531143927391,0.760191006068622,0.101988829741982,0,0,0,0.303114792872958,0.267964130156178,0,1.44806194206653,0.213233981900981,0.476128862927481,0.387533459016037,0.248298857183432,0.112131862580613,0.572824424503484,0,0,0.684466602170562,0.0673520530145875,0.215166616178029,0.332660356546013,0.407016343054873,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p4@SCCPDH | |||
}} |
Latest revision as of 23:01, 16 September 2015
Short description: | p4@SCCPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCCPDH_5end |
Coexpression cluster: | C3958_large_Hep2_Hepatocyte_testis_Basophils_spinal_mesothelioma |
Association with transcript: | -6bp_to_ENST00000366509, NM_016002, uc001ibr.2_5end |
EntrezGene: | SCCPDH |
HGNC: | 24275 |
UniProt: | E9PEA8Q8NBX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.96e-18 | 9 |
brainstem | 6.72e-08 | 6 |
upper respiratory tract | 2.81e-07 | 19 |