FFCP PHASE1:Hg19::chr1:239550209..239550229,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000492335_5end | |||
|cluster_id=chr1:239550209..239550229,+ | |||
|coexpression_cluster_id=C1067 | |||
|description=CAGE_peak_8_at_CHRM3_5end | |||
|id=chr1:239550209..239550229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.35e-13;82!UBERON:0006298;1.09e-08;1!UBERON:0008801;1.63e-08;1!UBERON:0005754;4.10e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.10e-08;1!DOID:4549;4.10e-08;1!DOID:5861;4.10e-08;1!DOID:6496;4.10e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.24e-08,1;DOID:4549,6.24e-08,1;DOID:5861,6.24e-08,1;DOID:6496,6.24e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-38!115;UBERON:0001950!4.40e-33!20;UBERON:0001017!2.11e-30!82;UBERON:0005743!8.55e-30!86;UBERON:0002619!1.33e-29!22;UBERON:0000073!3.14e-28!94;UBERON:0001016!3.14e-28!94;UBERON:0000956!5.56e-28!25;UBERON:0000203!5.56e-28!25;UBERON:0001893!2.23e-27!34;UBERON:0001869!2.35e-27!32;UBERON:0000955!4.47e-26!69;UBERON:0006238!4.47e-26!69;UBERON:0002791!7.27e-26!33;UBERON:0001049!2.53e-23!57;UBERON:0005068!2.53e-23!57;UBERON:0006241!2.53e-23!57;UBERON:0007135!2.53e-23!57;UBERON:0002780!2.87e-23!41;UBERON:0001890!2.87e-23!41;UBERON:0006240!2.87e-23!41;UBERON:0002020!6.04e-23!34;UBERON:0003528!6.04e-23!34;UBERON:0003080!1.58e-22!42;UBERON:0002616!3.50e-19!59;UBERON:0000153!1.58e-18!129;UBERON:0007811!1.58e-18!129;UBERON:0003075!1.74e-18!86;UBERON:0007284!1.74e-18!86;UBERON:0000033!5.36e-18!123;UBERON:0002346!3.58e-17!90;UBERON:0004121!9.95e-17!169;UBERON:0003056!1.58e-16!61;UBERON:0000924!5.47e-16!173;UBERON:0006601!5.47e-16!173;UBERON:0000200!1.39e-11!6;UBERON:0001871!4.04e-11!7;UBERON:0001872!3.71e-10!5;UBERON:0002021!6.63e-10!5;UBERON:0000062!2.18e-08!511;UBERON:0000922!5.88e-08!612;UBERON:0000481!2.04e-07!347;UBERON:0000468!2.70e-07!659;UBERON:0000475!5.32e-07!365;UBERON:0005409!9.10e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.94e-62;20!UBERON:0002619;2.05e-56;22!UBERON:0000956;1.32e-49;25!UBERON:0000203;1.32e-49;25!UBERON:0001869;1.57e-46;32!UBERON:0001893;6.14e-44;34!UBERON:0002791;2.37e-40;32!UBERON:0003528;1.12e-36;34!UBERON:0002020;1.12e-36;34!UBERON:0001872;5.07e-34;5!UBERON:0002780;2.05e-28;41!UBERON:0001890;2.05e-28;41!UBERON:0001870;1.09e-21;3!UBERON:0000200;1.56e-18;6!UBERON:0000955;4.27e-17;68!UBERON:0000073;5.84e-17;53!UBERON:0002616;5.84e-17;53!UBERON:0001829;1.71e-15;2!UBERON:0002702;6.34e-15;2!UBERON:0001017;5.63e-14;75!UBERON:0002021;2.26e-13;5!UBERON:0001016;4.75e-12;83!UBERON:0001044;2.10e-11;6!UBERON:0003293;2.10e-11;6!UBERON:0003294;2.10e-11;6!UBERON:0010047;2.10e-11;6!UBERON:0003408;2.10e-11;6!UBERON:0000167;2.10e-11;6!UBERON:0006947;5.41e-10;3!UBERON:0004054;5.41e-10;3!UBERON:0007023;7.38e-09;114!UBERON:0001736;1.09e-08;1!UBERON:0002022;1.63e-08;1!UBERON:0001831;1.63e-08;1!UBERON:0001567;1.63e-08;1!UBERON:0002581;4.10e-08;1!UBERON:0002902;4.10e-08;1!UBERON:0001882;4.10e-08;1!UBERON:0001000;4.10e-08;1!UBERON:0000998;4.10e-08;1!UBERON:0006868;4.10e-08;1!UBERON:0009899;4.10e-08;1!UBERON:0007190;4.10e-08;1!UBERON:0005352;4.10e-08;1!UBERON:0005403;4.10e-08;1!UBERON:0005904;1.05e-07;4!UBERON:0011216;2.47e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.78e-62,20;UBERON:0002619,1.61e-56,22;UBERON:0001869,1.95e-50,32;UBERON:0000956,1.06e-49,25;UBERON:0000203,1.06e-49,25;UBERON:0001893,2.21e-47,34;UBERON:0002791,2.89e-44,32;UBERON:0003528,1.42e-41,34;UBERON:0002020,1.42e-41,34;UBERON:0002780,5.63e-39,41;UBERON:0001890,5.63e-39,41;UBERON:0003080,5.63e-39,41;UBERON:0006240,5.63e-39,41;UBERON:0001872,5.86e-34,5;UBERON:0000955,5.55e-32,68;UBERON:0006238,5.55e-32,68;UBERON:0000073,1.25e-29,53;UBERON:0002616,1.25e-29,53;UBERON:0001017,1.89e-29,81;UBERON:0001049,6.58e-28,56;UBERON:0005068,6.58e-28,56;UBERON:0006241,6.58e-28,56;UBERON:0007135,6.58e-28,56;UBERON:0001016,3.40e-26,89;UBERON:0007023,1.62e-25,114;UBERON:0003056,2.08e-25,61;UBERON:0001870,1.17e-21,3;UBERON:0000200,1.64e-18,6;UBERON:0003075,3.43e-18,82;UBERON:0007284,3.43e-18,82;UBERON:0002346,3.27e-17,86;UBERON:0004121,6.99e-17,171;UBERON:0000924,6.99e-17,171;UBERON:0006601,6.99e-17,171;UBERON:0001829,1.33e-15,2;UBERON:0002702,5.15e-15,2;UBERON:0011216,1.24e-14,223;UBERON:0010371,1.00e-13,104;UBERON:0002021,1.91e-13,5;UBERON:0001044,1.86e-11,6;UBERON:0003293,1.86e-11,6;UBERON:0003294,1.86e-11,6;UBERON:0010047,1.86e-11,6;UBERON:0000167,1.86e-11,6;UBERON:0010314,3.50e-10,132;UBERON:0006947,5.18e-10,3;UBERON:0004054,5.18e-10,3;UBERON:0004111,8.98e-10,240;UBERON:0001736,1.05e-08,1;UBERON:0006298,1.05e-08,1;UBERON:0001831,1.31e-08,1;UBERON:0001567,1.31e-08,1;UBERON:0008801,1.31e-08,1;UBERON:0002022,1.52e-08,1;UBERON:0002902,2.69e-08,1;UBERON:0009899,2.69e-08,1;UBERON:0001000,3.33e-08,1;UBERON:0005352,3.33e-08,1;UBERON:0007190,4.41e-08,1;UBERON:0000998,4.72e-08,1;UBERON:0006868,4.72e-08,1;UBERON:0002581,5.07e-08,1;UBERON:0001882,7.16e-08,1;UBERON:0005403,7.16e-08,1;UBERON:0005904,1.01e-07,4;UBERON:0003408,4.75e-07,10;UBERON:0000025,4.92e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0.19924798825107,0.552567831062295,0,0.306806047506464,0,0,0,0.179021174675609,0,0.690503839458535,0,0,2.90799823828566,1.11321717794222,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0.593042257361244,0.247127877893006,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,1.57833761139756,0,0.61214552326098,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.775912131907355,1.059073520298,0,0,0,2.02594547058812,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,2.61223093629506,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,0.976210119215705,1.3771002377715,0.573409195690071,0.110929051536852,0.18628920882415,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.02766760154335,4.25089728976755,0.478901577171454,2.05116364240755,0.756215088665154,1.79808856406967,0.968853873791107,0,0,0.235939446695481,0,0,0,0,0,0.902523940191087,0,0.781514011233092,0,0,0,1.2832141077495,1.56215619722769,2.48024155801421,1.71222687523548,1.09394961803644,2.74128883428591,0,0,0,0,0,0,0,0,0,0,0.883606528698812,1.24968269769413,0,0.222462803784138,0.470958557103084,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,2.58136415292167,0,0,1.27016115057279,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,1.6941912305844,0,0,0.154348316215889,0.437119121007915,0,3.43207650455468,0.235676547101626,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,3.66983426723633,0,0,2.03974470572744,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0.459474497674225,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0,0,0.560659312903067,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0.665756774185513,0,0 | |||
|short_description=p8@CHRM3 | |||
}} |
Latest revision as of 16:24, 16 September 2015
Short description: | p8@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CHRM3_5end |
Coexpression cluster: | C1067_ductus_salivary_smooth_submaxillary_medial_parotid_seminal |
Association with transcript: | 0bp_to_ENST00000492335_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.24e-08 | 1 |
extraosseous chondrosarcoma | 6.24e-08 | 1 |
myxoid chondrosarcoma | 6.24e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 6.24e-08 | 1 |