FFCP PHASE1:Hg19::chr1:207095275..207095278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |||
|TSSclassifier=strong | |||
|UniProt=E9PQG1 | |||
|association_with_transcript=7bp_to_ENST00000463473,ENST00000533312_5end | |||
|cluster_id=chr1:207095275..207095278,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_FAIM3_5end | |||
|id=chr1:207095275..207095278,- | |||
|ontology_enrichment_celltype=CL:0000542!2.68e-40!53;CL:0000051!2.68e-40!53;CL:0000838!3.56e-39!52;CL:0000738!3.46e-34!140;CL:0002087!8.92e-34!119;CL:0002031!1.97e-26!124;CL:0000037!3.26e-26!172;CL:0000566!3.26e-26!172;CL:0002032!4.35e-24!165;CL:0000837!4.35e-24!165;CL:0000988!1.78e-23!182;CL:0000791!6.73e-23!18;CL:0000789!6.73e-23!18;CL:0002420!6.73e-23!18;CL:0002419!6.73e-23!18;CL:0000790!6.73e-23!18;CL:0000945!7.87e-19!24;CL:0000826!7.87e-19!24;CL:0000084!3.60e-18!25;CL:0000827!3.60e-18!25;CL:0000236!2.27e-15!14;CL:0000625!8.35e-15!11;CL:0000624!6.93e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.88e-30;18!CL:0000789;2.88e-30;18!CL:0002419;2.88e-30;18!CL:0000542;1.51e-28;53!CL:0000945;8.57e-27;24!CL:0000236;2.03e-23;13!CL:0000084;1.50e-20;25!CL:0000625;4.33e-20;11!CL:0000624;6.61e-14;6!CL:0002087;1.16e-10;104!CL:0000898;3.21e-08;3!CL:0000226;1.68e-07;3!CL:0000842;1.68e-07;3!CL:0000623;7.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.81e-53,53;CL:0000051,2.81e-53,53;CL:0000838,1.80e-51,52;CL:0002087,4.01e-31,115;CL:0000791,2.50e-30,18;CL:0000789,2.50e-30,18;CL:0002420,2.50e-30,18;CL:0002419,2.50e-30,18;CL:0000790,2.50e-30,18;CL:0000738,5.15e-27,136;CL:0000945,8.10e-27,24;CL:0000826,8.10e-27,24;CL:0000236,1.42e-25,14;CL:0002031,2.11e-23,120;CL:0000084,1.36e-20,25;CL:0000827,1.36e-20,25;CL:0000625,3.87e-20,11;CL:0000037,1.94e-19,168;CL:0000988,8.21e-18,177;CL:0002032,1.71e-17,161;CL:0000837,1.71e-17,161;CL:0000624,6.39e-14,6;CL:0000898,3.17e-08,3;CL:0000226,1.44e-07,3;CL:0000842,1.44e-07,3;CL:0000623,8.27e-07,3;CL:0000825,8.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.88e-30;18!CL:0000051;1.51e-28;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.46e-12!15;UBERON:0000179!3.46e-12!15;UBERON:0000463!3.46e-12!15;UBERON:0002390!3.86e-10!102;UBERON:0003061!3.86e-10!102;UBERON:0002193!9.46e-10!112;UBERON:0004177!3.38e-09!7;UBERON:0007023!6.49e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-20;15!UBERON:0000179;2.41e-20;15!UBERON:0000463;2.41e-20;15!UBERON:0002390;7.02e-14;32!UBERON:0002193;1.02e-09;42!UBERON:0004177;5.18e-08;5!UBERON:0005057;5.18e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.21e-20,15;UBERON:0000179,2.21e-20,15;UBERON:0000463,2.21e-20,15;UBERON:0004177,2.10e-08,7;UBERON:0005057,2.10e-08,7;UBERON:0002193,9.89e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,2.21671591514854,3.14843125254717,1.96682138424452,0.767658796194425,0.154816123316076,0,0,0,0.387336002901508,0.142169232487422,0.880801318004542,0.553995408531877,0.601633342410425,0.217010870715852,0.447830948479849,1.6194683300949,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,1.36453075028923,0.224723484445085,0,1.60464513538047,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,33.4392864476513,34.4067325095143,37.3593886622693,23.4701622411579,50.0494983795016,39.6579183568593,33.0522436392431,31.483773899667,11.9534723512984,11.1575065980478,16.0554755812596,1.32171328579026,0.560508562981536,0.263384084775077,5.50787356318733,1.57204305099666,4.72883447698871,5.68434084328306,14.340579731878,15.6237775892462,15.5861382726329,4.12218690475142,12.3734481139432,10.8551608345974,14.8942125070759,2.0494611156108,3.51160238411671,2.46656856905514,1.10540007114339,3.18783394308558,18.0909607057714,23.5435928718948,12.5442628565972,1.13309342697566,3.83220493601921,8.24705869158312,10.3738073727996,8.28270077242652,9.76625180784628,5.70271226669025,8.2816315492775,11.9027548373609,13.742379920758,6.62976305723247,4.10563998460523,2.82249440514625,0.802320587350522,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68008530278475,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.448340575974109,2.75843064282698,1.07813787429759,1.41177339907723,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03011288817817,3.8828556147351,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,6.5968189200182,6.88173486428138,4.5571774973933,9.76750279376935,11.1067813733272,9.07862635669804,7.56044012133361,4.75875105776562,0,0,0,2.9728508020115,0,0.711418433484141,0.159426272728822,0,0,0,0,0,0.684704037099577,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,0,4.97311047956066,0,0,7.50817313312524,0,0,0,0,1.28236427328014,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.747511887973863,0.471612915298998,0,5.95399226174341,1.18566979138767,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0,0,0,8.98825102935078,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,0,0,10.3382309777839,13.5361564744512,0.199882311849858,0,0,0,0,2.75237570042724,0.143339583151451,0,0.135982980381829,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,3.87533459016037,3.22788514338461,0,0,0,0,0,10.6416243763048,0.932388670104793,0,0,0,0,0,0,0.122241444182866,0,0,7.84967795005002,5.77023286145819 | |||
|short_description=p4@FAIM3 | |||
}} |
Latest revision as of 06:18, 20 September 2015
Short description: | p4@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAIM3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 7bp_to_ENST00000463473, ENST00000533312_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | E9PQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.81e-53 | 53 |
common lymphoid progenitor | 2.81e-53 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-51 | 52 |
nongranular leukocyte | 4.01e-31 | 115 |
mature alpha-beta T cell | 2.50e-30 | 18 |
alpha-beta T cell | 2.50e-30 | 18 |
immature T cell | 2.50e-30 | 18 |
mature T cell | 2.50e-30 | 18 |
immature alpha-beta T cell | 2.50e-30 | 18 |
leukocyte | 5.15e-27 | 136 |
lymphocyte of B lineage | 8.10e-27 | 24 |
pro-B cell | 8.10e-27 | 24 |
B cell | 1.42e-25 | 14 |
hematopoietic lineage restricted progenitor cell | 2.11e-23 | 120 |
T cell | 1.36e-20 | 25 |
pro-T cell | 1.36e-20 | 25 |
CD8-positive, alpha-beta T cell | 3.87e-20 | 11 |
hematopoietic stem cell | 1.94e-19 | 168 |
hematopoietic cell | 8.21e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-17 | 161 |
CD4-positive, alpha-beta T cell | 6.39e-14 | 6 |
naive T cell | 3.17e-08 | 3 |
single nucleate cell | 1.44e-07 | 3 |
mononuclear cell | 1.44e-07 | 3 |
natural killer cell | 8.27e-07 | 3 |
pro-NK cell | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.21e-20 | 15 |
haemolymphatic fluid | 2.21e-20 | 15 |
organism substance | 2.21e-20 | 15 |
hemopoietic organ | 2.10e-08 | 7 |
immune organ | 2.10e-08 | 7 |
hemolymphoid system | 9.89e-07 | 108 |