FFCP PHASE1:Hg19::chr1:205601064..205601087,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3326 | |||
|TSSclassifier=strong | |||
|UniProt=P28324 | |||
|association_with_transcript=2bp_to_ENST00000289703,ENST00000357992_5end | |||
|cluster_id=chr1:205601064..205601087,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_4_at_ELK4_5end | |||
|id=chr1:205601064..205601087,- | |||
|ontology_enrichment_celltype=CL:0002139!2.87e-14!24;CL:0000071!1.55e-11!18;CL:0002546!1.55e-11!18;CL:0000115!4.25e-10!35;CL:0000213!1.71e-09!57;CL:0000215!1.71e-09!57;CL:0002031!2.57e-09!124;CL:0002078!3.15e-09!44;CL:0002087!6.70e-09!119;CL:0000738!1.06e-08!140;CL:0000542!3.77e-08!53;CL:0000051!3.77e-08!53;CL:0000838!6.61e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.57e-17;24!CL:0000071;1.91e-13;18!CL:0000115;1.75e-10;36!CL:1000413;2.15e-07;9!CL:0002078;5.67e-07;45!CL:0000213;8.27e-07;58!CL:0000215;8.27e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.84e-17,24;CL:0000071,1.20e-13,18;CL:0002546,1.20e-13,18;CL:0000115,1.95e-12,36;CL:0000213,6.50e-11,58;CL:0000215,6.50e-11,58;CL:0002078,1.70e-10,45;CL:0000542,5.80e-09,53;CL:0000051,5.80e-09,53;CL:0002031,1.07e-08,120;CL:0000738,1.11e-08,136;CL:0000838,1.13e-08,52;CL:0002087,7.54e-08,115;CL:1000413,1.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.91e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.55e-11!18;UBERON:0004638!1.55e-11!18;UBERON:0004852!1.55e-11!18;UBERON:0006914!2.87e-09!25;UBERON:0000487!4.01e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.91e-13;18!UBERON:0001986;1.91e-13;18!UBERON:0004852;1.91e-13;18!UBERON:0000487;2.34e-11;22!UBERON:0006914;1.05e-10;25!UBERON:0003915;2.15e-07;9!UBERON:0004700;2.15e-07;9!UBERON:0001917;2.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.20e-13,18;UBERON:0001986,1.20e-13,18;UBERON:0004852,1.20e-13,18;UBERON:0000487,9.74e-12,22;UBERON:0006914,1.87e-11,25;UBERON:0003915,1.23e-07,9;UBERON:0004700,1.23e-07,9;UBERON:0001917,1.23e-07,9 | |||
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| |||
|short_description=p4@ELK4 | |||
}} |
Latest revision as of 03:24, 20 September 2015
Short description: | p4@ELK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ELK4_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 2bp_to_ENST00000289703, ENST00000357992_5end |
EntrezGene: | ELK4 |
HGNC: | 3326 |
UniProt: | P28324 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.84e-17 | 24 |
blood vessel endothelial cell | 1.20e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.20e-13 | 18 |
endothelial cell | 1.95e-12 | 36 |
lining cell | 6.50e-11 | 58 |
barrier cell | 6.50e-11 | 58 |
meso-epithelial cell | 1.70e-10 | 45 |
lymphocyte | 5.80e-09 | 53 |
common lymphoid progenitor | 5.80e-09 | 53 |
hematopoietic lineage restricted progenitor cell | 1.07e-08 | 120 |
leukocyte | 1.11e-08 | 136 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 52 |
nongranular leukocyte | 7.54e-08 | 115 |
endothelial cell of artery | 1.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.20e-13 | 18 |
endothelium | 1.20e-13 | 18 |
cardiovascular system endothelium | 1.20e-13 | 18 |
simple squamous epithelium | 9.74e-12 | 22 |
squamous epithelium | 1.87e-11 | 25 |
endothelial tube | 1.23e-07 | 9 |
arterial system endothelium | 1.23e-07 | 9 |
endothelium of artery | 1.23e-07 | 9 |