FFCP PHASE1:Hg19::chr1:205419053..205419068,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18725 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000367154_5end | |||
|cluster_id=chr1:205419053..205419068,- | |||
|description=CAGE_peak_2_at_LEMD1_5end | |||
|id=chr1:205419053..205419068,- | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-25!254;CL:0000223!5.93e-14!59;CL:0002076!5.72e-12!43 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.44e-11;10!CL:1000494;7.44e-11;10!CL:0002076;1.38e-09;42!CL:0002251;5.11e-08;20!CL:0002621;6.71e-08;3!CL:0000239;7.64e-08;3!CL:1000615;7.64e-08;3!CL:0002306;7.64e-08;3!CL:1000449;7.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.62e-16,253;CL:0000223,2.85e-12,58;CL:1000507,8.71e-11,10;CL:1000494,8.71e-11,10;CL:0002076,1.89e-10,42;CL:0002251,4.20e-08,20;CL:0002621,6.83e-08,3;CL:0000239,8.44e-08,3;CL:1000615,8.44e-08,3;CL:0002306,8.44e-08,3;CL:1000449,8.11e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;6.44e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.29e-14!106;DOID:0050687!1.64e-11!143;DOID:162!6.13e-08!235;DOID:14566!1.31e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;4.48e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.31e-11,106;DOID:299,4.61e-08,25;DOID:0050687,8.99e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.26e-14!169;UBERON:0000925!1.26e-14!169;UBERON:0006595!1.26e-14!169;UBERON:0001007!1.33e-12!155;UBERON:0001555!1.33e-12!155;UBERON:0007026!1.33e-12!155;UBERON:0005911!2.81e-11!82;UBERON:0004921!2.18e-09!129;UBERON:0004185!2.18e-09!129;UBERON:0000077!3.83e-09!130;UBERON:0000466!5.89e-09!126;UBERON:0001048!1.45e-08!168;UBERON:0000464!5.68e-08!104;UBERON:0001041!1.05e-07!98;UBERON:0005177!1.05e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.44e-11;10!UBERON:0009773;7.44e-11;10!UBERON:0001231;7.44e-11;10!UBERON:0004810;7.44e-11;10!UBERON:0000305;4.23e-09;7!UBERON:0005631;1.12e-08;10!UBERON:0000158;1.12e-08;10!UBERON:0001949;6.71e-08;3!UBERON:0006853;7.64e-08;3!UBERON:0007685;7.64e-08;3!UBERON:0004134;7.64e-08;3!UBERON:0006555;7.35e-07;15!UBERON:0004819;7.35e-07;15!UBERON:0001285;7.35e-07;15!UBERON:0007684;7.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.71e-11,10;UBERON:0000305,3.06e-09,7;UBERON:0006555,2.34e-08,16;UBERON:0004819,2.34e-08,16;UBERON:0005631,4.76e-08,14;UBERON:0000158,4.76e-08,14;UBERON:0004871,5.09e-08,8;UBERON:0001949,6.83e-08,3;UBERON:0006853,8.44e-08,3;UBERON:0007685,8.44e-08,3;UBERON:0004134,8.44e-08,3;UBERON:0004211,8.11e-07,15;UBERON:0009773,8.11e-07,15;UBERON:0001231,8.11e-07,15;UBERON:0001285,8.11e-07,15;UBERON:0007684,8.11e-07,15;UBERON:0004208,8.11e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,2.62129646556207,1.84636884759917,0,0,0,0,0,0,0.738726348460727,0,0,0.85870796139317,3.01123735160345,1.00434111675842,0.229240217243854,0.328402357799783,0.314843125254717,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,2.01210257911091,0,0,0,0,0,0,2.45790524626576,0.886917589850256,1.14185221401064,0.523916301990851,2.91436230634034,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.732186172644509,0.367663080345869,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0.286836620748814,0,1.68203280042692,0,0,0.933633106199299,0,0.326923806226917,1.05950199351452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,2.45471508531751,4.01526433544605,0.121973706129595,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,1.09750285408626,0,0.904760751704678,5.64789515467031,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,0.839910640994298,2.97727704209012,0.358234090811393,0.290633938513962,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,1.77866236955724,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,2.11673205330776,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.802025881213139,1.28913384510255,0,0,0,3.15839729035188,4.08181286653398,0,1.46139224653261,1.26661954671451,0,0,0,0,0,0.501689773854853,3.3133915495855,2.49322802678617,1.34324852833307,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.824328093181778,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0.330569830721956,0,2.29702882490251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0.470719003883896,0.43050537267123,0,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,2.02965735142199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0.66866030566487,10.5130374318373,11.9372242368845,5.3453642549875,11.3649459776716,0,0,0.111308705022906,5.10892010102955,0,0.597743964753209,0.276283915531148,0,0.306806047506464,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,2.54253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.461701551022782,0,0,0.0897576444097721,0.54323685961004,2.87101043758728,0,0,0,0,0,0.451191321234361,1.17637520590644,2.01385904371011,0.37950746544837,0,0.843992258112108,5.71314828557017,0,0,0,0.619202951523374,0,0,0.123563938946503,0.208843899010911,0,0,0,0,1.56531695145672,1.45668227720456,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,1.13843818411917,0,2.77695581336209,3.42973390950322,1.39294730528644,4.54289337429278,0,0,0,0,0.484945082442097,0,0.451961481561065,0.137041924646751,0,0,0.977756913674015,4.24841747333129,0.213452994739353,0.19980960958213,2.59362750877391,0,0,0.288109595976299,0.869767748958028,2.59263438078475,2.8539883275459,1.569042694685,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,5.82479747637269,0.787831823072237,1.2362378757175,1.68508859635462,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0.472834243795189,0.786818822024972,0,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0,0,0,6.34333520085005,0.533937062838473,0.157204305099666,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.499921631848426,0,0.570930667089935,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.450772826991655,0,0.813741466409323,0,0.751873899297419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,1.09642024789354,0.176689145945881,2.12205442098006,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0.184105950251841,0.979156554036111,0.622077260032973,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,0.917142992608395,0.462102664601353,0,0.690359926060101,0,0.526472298444801,0.20170506870352,0.781514011233092,0.523813388962845,0.327543835020193,8.87136517302272,0,0,0,0,0,0,0,0,1.66091155931474,0,0.336283722218824,0,0.455324382702595,0.532214220975833,0.345701962667338,0.514464028312255,0,0,2.12748913591143,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0.863710364874486,0.47775168788705,0,0,5.46334699230189,1.21700790611806,0,0.207216164163037,0,0,2.15113679410139,0.118332000730565,0,0,1.3746412112643,0.31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| |||
|short_description=p2@LEMD1 | |||
}} |
Latest revision as of 02:55, 20 September 2015
Short description: | p2@LEMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LEMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367154_5end |
EntrezGene: | LEMD1 |
HGNC: | 18725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.62e-16 | 253 |
endodermal cell | 2.85e-12 | 58 |
kidney tubule cell | 8.71e-11 | 10 |
nephron tubule epithelial cell | 8.71e-11 | 10 |
endo-epithelial cell | 1.89e-10 | 42 |
epithelial cell of alimentary canal | 4.20e-08 | 20 |
gingival epithelial cell | 6.83e-08 | 3 |
brush border epithelial cell | 8.44e-08 | 3 |
kidney cortex tubule cell | 8.44e-08 | 3 |
epithelial cell of proximal tubule | 8.44e-08 | 3 |
epithelial cell of nephron | 8.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.71e-11 | 10 |
amnion | 3.06e-09 | 7 |
excretory tube | 2.34e-08 | 16 |
kidney epithelium | 2.34e-08 | 16 |
extraembryonic membrane | 4.76e-08 | 14 |
membranous layer | 4.76e-08 | 14 |
somatic layer of lateral plate mesoderm | 5.09e-08 | 8 |
gingival epithelium | 6.83e-08 | 3 |
renal cortex tubule | 8.44e-08 | 3 |
region of nephron tubule | 8.44e-08 | 3 |
proximal tubule | 8.44e-08 | 3 |
nephron epithelium | 8.11e-07 | 15 |
renal tubule | 8.11e-07 | 15 |
nephron tubule | 8.11e-07 | 15 |
nephron | 8.11e-07 | 15 |
uriniferous tubule | 8.11e-07 | 15 |
nephrogenic mesenchyme | 8.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.31e-11 | 106 |
adenocarcinoma | 4.61e-08 | 25 |
cell type cancer | 8.99e-08 | 143 |