FFCP PHASE1:Hg19::chr1:201178049..201178059,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:201178049..201178059,+ | |||
|coexpression_cluster_id=C1256 | |||
|description=CAGE_peak_at_chr1:201178049..201178059,+ | |||
|id=chr1:201178049..201178059,+ | |||
|ontology_enrichment_celltype=CL:0000342!2.17e-07!1;CL:0002565!2.17e-07!1;CL:0000515!5.22e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.83e-18;10!UBERON:0007687;1.83e-18;10 | |||
|ontology_enrichment_disease=DOID:0060085!1.91e-07!1;DOID:3165!1.91e-07!1;DOID:0060121!1.91e-07!1;DOID:2438!1.91e-07!1;DOID:4418!1.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002426!4.89e-08!1;UBERON:0003831!4.89e-08!1;UBERON:0003898!4.89e-08!1;UBERON:0004830!4.89e-08!1;UBERON:0001774!4.89e-08!1;UBERON:0003830!4.89e-08!1;UBERON:0005175!4.89e-08!1;UBERON:0003897!4.89e-08!1;UBERON:0001103!4.89e-08!1;UBERON:0010084!4.89e-08!1;UBERON:0000989!1.01e-07!1;UBERON:0008811!1.01e-07!1;UBERON:0006258!1.01e-07!1;UBERON:0005876!1.01e-07!1;UBERON:0004874!1.01e-07!1;UBERON:0002506!2.17e-07!1;UBERON:0001769!2.17e-07!1;UBERON:0003112!2.31e-07!1;UBERON:0000032!2.31e-07!1;UBERON:0005253!2.31e-07!1;UBERON:0003128!2.31e-07!1;UBERON:0002241!2.31e-07!1;UBERON:0001703!2.31e-07!1;UBERON:0004761!2.31e-07!1;UBERON:0009617!2.31e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.30e-21;1!UBERON:0003831;2.30e-21;1!UBERON:0003898;2.30e-21;1!UBERON:0004830;2.30e-21;1!UBERON:0003830;2.30e-21;1!UBERON:0005175;2.30e-21;1!UBERON:0001774;2.30e-21;1!UBERON:0001103;2.30e-21;1!UBERON:0005090;2.23e-11;2!UBERON:0001630;2.23e-11;2!UBERON:0002113;4.52e-08;24!UBERON:0011143;4.52e-08;24!UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3!UBERON:0000489;8.95e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.30e-21,1;UBERON:0003831,2.30e-21,1;UBERON:0003898,2.30e-21,1;UBERON:0004830,2.30e-21,1;UBERON:0003830,2.30e-21,1;UBERON:0005175,2.30e-21,1;UBERON:0001774,2.30e-21,1;UBERON:0001103,2.30e-21,1;UBERON:0010084,2.30e-21,1;UBERON:0005090,2.23e-11,2;UBERON:0001630,2.23e-11,2;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3;UBERON:0002113,1.60e-07,26;UBERON:0003918,1.60e-07,26;UBERON:0011143,1.60e-07,26;UBERON:0005095,1.60e-07,26;UBERON:0007687,1.60e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79695391420225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0,0,0,4.09986429740715,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,2.24263725161227,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:201178049..201178059,+ | |||
}} |
Latest revision as of 02:05, 28 July 2015
Short description: | p@chr1:201178049..201178059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201178049..201178059, + |
Coexpression cluster: | C1256_mesothelioma_leiomyoblastoma_diaphragm_skeletal_renal_endometrial_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.30e-21 | 1 |
respiratory system muscle | 2.30e-21 | 1 |
skeletal muscle of trunk | 2.30e-21 | 1 |
respiratory system skeletal muscle | 2.30e-21 | 1 |
thoracic segment muscle | 2.30e-21 | 1 |
chest organ | 2.30e-21 | 1 |
muscle of trunk | 2.30e-21 | 1 |
diaphragm | 2.30e-21 | 1 |
future diaphragm | 2.30e-21 | 1 |
muscle structure | 2.23e-11 | 2 |
muscle organ | 2.23e-11 | 2 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
kidney | 1.60e-07 | 26 |
kidney mesenchyme | 1.60e-07 | 26 |
upper urinary tract | 1.60e-07 | 26 |
kidney rudiment | 1.60e-07 | 26 |
kidney field | 1.60e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.35e-11 | 2 |