FFCP PHASE1:Hg19::chr1:198636401..198636419,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-211bp_to_ENST00000413577_5end | |||
|cluster_id=chr1:198636401..198636419,- | |||
|coexpression_cluster_id=C3918 | |||
|description=CAGE_peak_3_at_ENST00000413577_5end | |||
|id=chr1:198636401..198636419,- | |||
|ontology_enrichment_celltype=CL:0002620!2.03e-43!23;CL:0000057!3.51e-18!75;CL:0000055!2.68e-09!180;CL:0000197!1.82e-07!6;CL:0000098!1.82e-07!6;CL:0002167!1.82e-07!6;CL:0002580!6.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.04e-52;23!CL:0000511;1.93e-16;1!CL:0002625;1.93e-16;1!CL:0000216;1.93e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.37e-52,23;CL:0000511,1.41e-16,1;CL:0002625,1.41e-16,1;CL:0000216,1.41e-16,1;CL:0000057,1.84e-15,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.83e-24!5;DOID:450!3.83e-24!5;DOID:66!3.83e-24!5;DOID:423!3.83e-24!5;DOID:0080000!3.83e-24!5;DOID:11722!3.83e-24!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.63e-49;5!DOID:450;8.63e-49;5!DOID:66;8.63e-49;5!DOID:423;8.63e-49;5!DOID:0080000;8.63e-49;5!DOID:11722;8.63e-49;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.65e-49,5;DOID:450,8.65e-49,5;DOID:66,8.65e-49,5;DOID:423,8.65e-49,5;DOID:0080000,8.65e-49,5;DOID:11722,8.65e-49,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.88e-27!40;UBERON:0002199!1.76e-23!45;UBERON:0002416!1.76e-23!45;UBERON:0003102!1.63e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.30e-23;41!UBERON:0002199;1.21e-19;46!UBERON:0002416;1.21e-19;46!UBERON:0001136;1.93e-16;1!UBERON:0001343;1.93e-16;1!UBERON:0004910;1.93e-16;1!UBERON:0004813;1.93e-16;1!UBERON:0003102;2.35e-14;50!UBERON:0004909;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.95e-29,41;UBERON:0002199,5.24e-26,46;UBERON:0002416,5.24e-26,46;UBERON:0001136,1.41e-16,1;UBERON:0001343,1.41e-16,1;UBERON:0004910,1.41e-16,1;UBERON:0005154,1.41e-16,1;UBERON:0005295,1.41e-16,1;UBERON:0004813,1.41e-16,1;UBERON:0005297,1.41e-16,1;UBERON:0005294,1.41e-16,1;UBERON:0010141,1.41e-16,1;UBERON:0005891,1.41e-16,1;UBERON:0003102,1.10e-11,99;UBERON:0004909,5.94e-09,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30535125653269,1.49490172172997,1.69545520927649,1.50045548042201,0.412210116953756,2.83404594050192,1.30281799432113,0.843881661206331,2.33848812386877,0.757301322732344,0.920498986422993,0.161646056818812,0.710019185033229,3.12331504505685,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98989253361951,3.451893928307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000413577 | |||
}} |
Latest revision as of 01:56, 28 July 2015
Short description: | p3@ENST00000413577 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000413577_5end |
Coexpression cluster: | C3918_glioblastoma_Fibroblast_Preadipocyte_liposarcoma_mesodermal_extraskeletal_osteoclastoma |
Association with transcript: | -211bp_to_ENST00000413577_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.37e-52 | 23 |
androgen binding protein secreting cell | 1.41e-16 | 1 |
seminiferous tubule epithelial cell | 1.41e-16 | 1 |
Sertoli cell | 1.41e-16 | 1 |
fibroblast | 1.84e-15 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.95e-29 | 41 |
integument | 5.24e-26 | 46 |
integumental system | 5.24e-26 | 46 |
mesothelium | 1.41e-16 | 1 |
seminiferous tubule of testis | 1.41e-16 | 1 |
epithelium of male gonad | 1.41e-16 | 1 |
epithelial cord | 1.41e-16 | 1 |
sex cord | 1.41e-16 | 1 |
seminiferous tubule epithelium | 1.41e-16 | 1 |
testis sex cord | 1.41e-16 | 1 |
genital ridge | 1.41e-16 | 1 |
primitive sex cord of indifferent gonad | 1.41e-16 | 1 |
coelomic epithelium | 1.41e-16 | 1 |
surface structure | 1.10e-11 | 99 |
epithelium of gonad | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.65e-49 | 5 |
myotonic disease | 8.65e-49 | 5 |
muscle tissue disease | 8.65e-49 | 5 |
myopathy | 8.65e-49 | 5 |
muscular disease | 8.65e-49 | 5 |
myotonic dystrophy | 8.65e-49 | 5 |