FFCP PHASE1:Hg19::chr1:198607616..198607629,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9666 | |||
|TSSclassifier=strong | |||
|UniProt=E9PMF7 | |||
|association_with_transcript=-171bp_to_ENST00000367379_5end | |||
|cluster_id=chr1:198607616..198607629,+ | |||
|description=CAGE_peak_12_at_PTPRC_5end | |||
|id=chr1:198607616..198607629,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.87e-25!18;CL:0000789!3.87e-25!18;CL:0002420!3.87e-25!18;CL:0002419!3.87e-25!18;CL:0000790!3.87e-25!18;CL:0000084!5.08e-23!25;CL:0000827!5.08e-23!25;CL:0000037!6.49e-20!172;CL:0000566!6.49e-20!172;CL:0000625!2.55e-18!11;CL:0000988!3.89e-18!182;CL:0002032!7.31e-18!165;CL:0000837!7.31e-18!165;CL:0000838!1.61e-17!52;CL:0000542!4.51e-17!53;CL:0000051!4.51e-17!53;CL:0000738!1.31e-14!140;CL:0002031!2.56e-14!124;CL:0002087!2.58e-14!119;CL:0000624!5.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.88e-23;25!CL:0000791;1.35e-18;18!CL:0000789;1.35e-18;18!CL:0002419;1.35e-18;18!CL:0000625;4.45e-14;11!CL:0000624;2.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.37e-23,25;CL:0000827,2.37e-23,25;CL:0000791,2.23e-18,18;CL:0000789,2.23e-18,18;CL:0002420,2.23e-18,18;CL:0002419,2.23e-18,18;CL:0000790,2.23e-18,18;CL:0000625,4.78e-14,11;CL:0000838,9.75e-11,52;CL:0000542,1.62e-10,53;CL:0000051,1.62e-10,53;CL:0000624,4.44e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-18;18 | |||
|ontology_enrichment_disease=DOID:1036!4.82e-11!8;DOID:1240!6.21e-08!39;DOID:2531!2.24e-07!51;DOID:0060083!2.24e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3371;7.08e-11;1!DOID:4549;7.08e-11;1!DOID:5861;7.08e-11;1!DOID:6496;7.08e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.77e-10,1;DOID:4549,1.77e-10,1;DOID:5861,1.77e-10,1;DOID:6496,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.04e-08!7;UBERON:0002390!4.92e-07!102;UBERON:0003061!4.92e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.205601498999509,1.67186495390678,0,0,0,1.22551502573691,1.17842362989935,0.886135578334485,0.541607727530031,0.384273959177026,0.780356085359269,0.164437904603676,0.276350017785848,1.15921234294021,1.33457906845854,0.802622484269139,0,1.35971211237079,0,1.37450978193052,1.77113784413652,1.27426165729639,0.651083453856419,0.950452044448374,0.752875595388864,1.53583933385302,1.24930726552346,1.18388626022008,0.821127996921047,0,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,1.19115887728894,0,0,0.540031437238115,0,0,0,0,0,0,0,1.75368900001705,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.67043704337145,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,3.06579894587209,0.31396051279005,0,0.451191321234361,0,1.51039428278258,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.059073520298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.213233981900981,0,1.42095601639213,0.993195428733726,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p12@PTPRC | |||
}} |
Latest revision as of 14:26, 19 September 2015
Short description: | p12@PTPRC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PTPRC_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_ENST00000367379_5end |
EntrezGene: | PTPRC |
HGNC: | 9666 |
UniProt: | E9PMF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.37e-23 | 25 |
pro-T cell | 2.37e-23 | 25 |
mature alpha-beta T cell | 2.23e-18 | 18 |
alpha-beta T cell | 2.23e-18 | 18 |
immature T cell | 2.23e-18 | 18 |
mature T cell | 2.23e-18 | 18 |
immature alpha-beta T cell | 2.23e-18 | 18 |
CD8-positive, alpha-beta T cell | 4.78e-14 | 11 |
lymphoid lineage restricted progenitor cell | 9.75e-11 | 52 |
lymphocyte | 1.62e-10 | 53 |
common lymphoid progenitor | 1.62e-10 | 53 |
CD4-positive, alpha-beta T cell | 4.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.77e-10 | 1 |
extraosseous chondrosarcoma | 1.77e-10 | 1 |
myxoid chondrosarcoma | 1.77e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.77e-10 | 1 |