FFCP PHASE1:Hg19::chr1:19567634..19567652,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28957 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-436bp_to_ENST00000467423_5end | |||
|cluster_id=chr1:19567634..19567652,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_3_at_KIAA0090_5end | |||
|id=chr1:19567634..19567652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002552;6.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.22e-39;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.03e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.82e-07!2;UBERON:0002757!1.82e-07!2;UBERON:0010134!1.82e-07!2;UBERON:0002784!1.82e-07!2;UBERON:0005408!1.82e-07!2;UBERON:0001899!1.82e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-56;2!UBERON:0002757;1.13e-56;2!UBERON:0010134;1.13e-56;2!UBERON:0005408;1.13e-56;2!UBERON:0001899;1.13e-56;2!UBERON:0003296;5.61e-29;4!UBERON:0010133;5.61e-29;4!UBERON:0002784;5.61e-29;4!UBERON:0000966;9.62e-24;5!UBERON:0005388;9.62e-24;5!UBERON:0001802;9.62e-24;5!UBERON:0001894;4.73e-17;7!UBERON:0000970;1.46e-13;20!UBERON:0002104;5.94e-13;21!UBERON:0000020;6.86e-12;23!UBERON:0001032;2.00e-11;24!UBERON:0004456;2.00e-11;24!UBERON:0000019;5.58e-07;19!UBERON:0000047;5.58e-07;19!UBERON:0004088;5.58e-07;19!UBERON:0010230;5.58e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-56,2;UBERON:0002757,1.13e-56,2;UBERON:0010134,1.13e-56,2;UBERON:0005408,1.13e-56,2;UBERON:0001899,1.13e-56,2;UBERON:0003296,5.61e-29,4;UBERON:0010133,5.61e-29,4;UBERON:0002784,5.61e-29,4;UBERON:0000966,5.35e-20,6;UBERON:0005388,5.35e-20,6;UBERON:0001802,5.35e-20,6;UBERON:0001894,4.73e-17,7;UBERON:0006222,4.73e-17,7;UBERON:0000970,5.82e-13,21;UBERON:0002104,5.82e-13,21;UBERON:0000020,1.97e-11,24;UBERON:0001032,1.97e-11,24;UBERON:0004456,1.97e-11,24;UBERON:0003056,8.45e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58726814966023,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,4.70797211106354,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,10.7929581706751,5.3724627989127,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,5.16720428703517,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@KIAA0090 | |||
}} |
Latest revision as of 12:03, 19 September 2015
Short description: | p3@KIAA0090 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIAA0090_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -436bp_to_ENST00000467423_5end |
EntrezGene: | KIAA0090 |
HGNC: | 28957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-56 | 2 |
regional part of epithalamus | 1.13e-56 | 2 |
secretory circumventricular organ | 1.13e-56 | 2 |
circumventricular organ | 1.13e-56 | 2 |
epithalamus | 1.13e-56 | 2 |
gland of diencephalon | 5.61e-29 | 4 |
neuroendocrine gland | 5.61e-29 | 4 |
regional part of diencephalon | 5.61e-29 | 4 |
retina | 5.35e-20 | 6 |
photoreceptor array | 5.35e-20 | 6 |
posterior segment of eyeball | 5.35e-20 | 6 |
diencephalon | 4.73e-17 | 7 |
future diencephalon | 4.73e-17 | 7 |
eye | 5.82e-13 | 21 |
visual system | 5.82e-13 | 21 |
sense organ | 1.97e-11 | 24 |
sensory system | 1.97e-11 | 24 |
entire sense organ system | 1.97e-11 | 24 |
pre-chordal neural plate | 8.45e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.11e-08 | 4 |