FFCP PHASE1:Hg19::chr1:186946626..186946652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:186946626..186946652,+ | |||
|description=CAGE_peak_at_chr1:186946626..186946652,+ | |||
|id=chr1:186946626..186946652,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.27e-36!24;CL:0000115!6.89e-28!35;CL:0000071!1.15e-27!18;CL:0002546!1.15e-27!18;CL:0000222!8.19e-26!119;CL:0000359!8.46e-23!32;CL:0002078!3.18e-20!44;CL:0000192!7.38e-17!42;CL:0000514!7.38e-17!42;CL:0002539!1.66e-14!10;CL:0000187!1.84e-14!54;CL:0000680!2.77e-14!57;CL:0000056!2.77e-14!57;CL:0000355!2.77e-14!57;CL:1000413!4.40e-14!9;CL:0000183!9.24e-14!59;CL:0000213!1.47e-13!57;CL:0000215!1.47e-13!57;CL:0000393!3.82e-13!60;CL:0000211!3.82e-13!60;CL:0000220!1.13e-11!246;CL:0002321!1.99e-11!248;CL:0002543!7.00e-11!6;CL:0002544!6.39e-10!6;CL:0005020!8.79e-10!6;CL:0002138!8.79e-10!6;CL:0005022!8.79e-10!6;CL:0002551!4.13e-08!6;CL:0000055!6.95e-08!180;CL:0002057!1.28e-07!42;CL:0002371!1.87e-07!591;CL:0000860!8.64e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.93e-69;24!CL:0000071;9.99e-53;18!CL:0000115;6.28e-43;36!CL:0000359;7.05e-30;32!CL:0002078;1.29e-26;45!CL:1000413;6.34e-26;9!CL:0002543;6.74e-20;6!CL:0002539;3.41e-18;10!CL:0000213;3.85e-18;58!CL:0000215;3.85e-18;58!CL:0002138;4.95e-18;6!CL:0002544;8.24e-18;6!CL:0000192;2.73e-17;43!CL:0002618;6.40e-11;3!CL:0002592;3.01e-10;3!CL:0002144;3.79e-10;3!CL:0000187;2.16e-08;55!CL:0000076;7.85e-08;63!CL:0002545;1.49e-07;2!CL:0002589;2.51e-07;2!CL:0000393;2.69e-07;61!CL:0000211;2.69e-07;61!CL:0002594;4.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.51e-69,24;CL:0000071,3.88e-53,18;CL:0002546,3.88e-53,18;CL:0000115,6.23e-52,36;CL:0000222,1.11e-42,121;CL:0002078,4.53e-40,45;CL:0000359,9.75e-33,32;CL:0000213,1.86e-29,58;CL:0000215,1.86e-29,58;CL:1000413,3.20e-26,9;CL:0000192,5.53e-23,43;CL:0000514,5.53e-23,43;CL:0002543,6.66e-20,6;CL:0002321,1.69e-19,250;CL:0002539,3.42e-18,10;CL:0002544,5.19e-18,6;CL:0005020,9.74e-18,6;CL:0002138,9.74e-18,6;CL:0005022,9.74e-18,6;CL:0000187,7.99e-17,55;CL:0000680,1.09e-15,58;CL:0000056,1.09e-15,58;CL:0000355,1.09e-15,58;CL:0000393,1.15e-14,61;CL:0000211,1.15e-14,61;CL:0000076,9.90e-12,63;CL:0002618,6.41e-11,3;CL:0002144,3.01e-10,3;CL:0002592,3.01e-10,3;CL:0002545,1.54e-07,2;CL:0002589,2.72e-07,2;CL:0002594,3.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;9.99e-53;18!CL:0005022;4.95e-18;6!CL:0000514;2.73e-17;43!CL:0000222;6.40e-10;121!CL:0000355;5.92e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.51e-49!79;UBERON:0007798!1.51e-49!79;UBERON:0000055!1.48e-48!69;UBERON:0001981!1.64e-43!60;UBERON:0007500!1.64e-43!60;UBERON:0004537!1.64e-43!60;UBERON:0006965!1.64e-43!60;UBERON:0001637!2.10e-40!42;UBERON:0003509!2.10e-40!42;UBERON:0004572!2.10e-40!42;UBERON:0004535!2.76e-38!110;UBERON:0001009!1.03e-36!113;UBERON:0004872!3.04e-35!84;UBERON:0004573!1.10e-33!33;UBERON:0004571!1.10e-33!33;UBERON:0001986!1.15e-27!18;UBERON:0004638!1.15e-27!18;UBERON:0004852!1.15e-27!18;UBERON:0003914!1.17e-26!118;UBERON:0003081!7.80e-22!216;UBERON:0000487!1.87e-21!22;UBERON:0000947!1.84e-20!21;UBERON:0010191!1.84e-20!21;UBERON:0000490!5.67e-20!138;UBERON:0006914!4.01e-18!25;UBERON:0000483!1.02e-16!309;UBERON:0000119!2.58e-16!312;UBERON:0004290!3.25e-16!70;UBERON:0000477!7.40e-16!286;UBERON:0000025!1.73e-15!194;UBERON:0004111!3.19e-15!241;UBERON:0000914!6.18e-15!83;UBERON:0002329!6.18e-15!83;UBERON:0003077!6.18e-15!83;UBERON:0003059!6.18e-15!83;UBERON:0007282!6.18e-15!83;UBERON:0009618!6.18e-15!83;UBERON:0007285!6.18e-15!83;UBERON:0004237!1.66e-14!10;UBERON:0004695!1.66e-14!10;UBERON:0002111!1.66e-14!10;UBERON:0004178!1.66e-14!10;UBERON:0003915!4.40e-14!9;UBERON:0004700!4.40e-14!9;UBERON:0001917!4.40e-14!9;UBERON:0000467!1.57e-13!625;UBERON:0000480!1.88e-13!626;UBERON:0002385!5.37e-13!63;UBERON:0001015!5.37e-13!63;UBERON:0000383!5.37e-13!63;UBERON:0001134!9.03e-13!61;UBERON:0002036!9.03e-13!61;UBERON:0003082!9.03e-13!61;UBERON:0000486!2.60e-12!82;UBERON:0000926!5.60e-11!448;UBERON:0004120!5.60e-11!448;UBERON:0006603!5.60e-11!448;UBERON:0000468!5.69e-11!659;UBERON:0002204!6.24e-11!167;UBERON:0001135!2.58e-10!15;UBERON:0000923!2.83e-10!604;UBERON:0005291!2.83e-10!604;UBERON:0006598!2.83e-10!604;UBERON:0002532!2.83e-10!604;UBERON:0002050!3.34e-10!605;UBERON:0005423!3.34e-10!605;UBERON:0000922!1.05e-09!612;UBERON:0005256!5.92e-09!143;UBERON:0001473!4.75e-07!8;UBERON:0004536!4.75e-07!8;UBERON:0006558!4.75e-07!8;UBERON:0001638!7.96e-07!9;UBERON:0003920!7.96e-07!9;UBERON:0004582!7.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.99e-53;18!UBERON:0001986;9.99e-53;18!UBERON:0004852;9.99e-53;18!UBERON:0000487;3.17e-42;22!UBERON:0001637;8.06e-40;42!UBERON:0003509;8.06e-40;42!UBERON:0004572;8.06e-40;42!UBERON:0004573;1.83e-39;33!UBERON:0004571;1.83e-39;33!UBERON:0000055;2.40e-38;65!UBERON:0006914;1.48e-36;25!UBERON:0007500;2.33e-36;56!UBERON:0001981;2.33e-36;56!UBERON:0004537;2.33e-36;56!UBERON:0002049;1.52e-31;75!UBERON:0007798;1.52e-31;75!UBERON:0000490;5.75e-30;33!UBERON:0003915;6.34e-26;9!UBERON:0004700;6.34e-26;9!UBERON:0001917;6.34e-26;9!UBERON:0000947;5.36e-25;21!UBERON:0010191;5.36e-25;21!UBERON:0003914;8.02e-24;74!UBERON:0004237;3.41e-18;10!UBERON:0004695;3.41e-18;10!UBERON:0002111;3.41e-18;10!UBERON:0004178;3.41e-18;10!UBERON:0000025;9.47e-15;93!UBERON:0001009;4.95e-14;112!UBERON:0004535;5.10e-14;109!UBERON:0001473;2.40e-13;8!UBERON:0004536;2.40e-13;8!UBERON:0006558;2.40e-13;8!UBERON:0001638;5.46e-13;9!UBERON:0003920;5.46e-13;9!UBERON:0004582;5.46e-13;9!UBERON:0010260;4.30e-12;9!UBERON:0001135;1.17e-11;15!UBERON:0002465;1.57e-10;10!UBERON:0003498;3.01e-10;3!UBERON:0005985;3.01e-10;3!UBERON:0001621;3.01e-10;3!UBERON:0010523;3.79e-10;3!UBERON:0001915;3.79e-10;3!UBERON:0001982;3.79e-10;3!UBERON:0004111;1.87e-08;130!UBERON:0000119;5.35e-08;139!UBERON:0005800;1.49e-07;2!UBERON:0001515;1.49e-07;2!UBERON:0001529;2.51e-07;2!UBERON:0007204;2.51e-07;2!UBERON:0001310;4.16e-07;4!UBERON:0000483;8.18e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.55e-77,68;UBERON:0002049,2.74e-69,78;UBERON:0007798,2.74e-69,78;UBERON:0007500,1.79e-66,59;UBERON:0001981,1.79e-66,59;UBERON:0004537,1.79e-66,59;UBERON:0006965,1.79e-66,59;UBERON:0001637,2.25e-53,42;UBERON:0003509,2.25e-53,42;UBERON:0004572,2.25e-53,42;UBERON:0004638,3.88e-53,18;UBERON:0001986,3.88e-53,18;UBERON:0004852,3.88e-53,18;UBERON:0004535,1.25e-48,109;UBERON:0001009,5.19e-47,112;UBERON:0004872,7.02e-47,83;UBERON:0004573,6.47e-43,33;UBERON:0004571,6.47e-43,33;UBERON:0000487,1.48e-42,22;UBERON:0006914,7.58e-37,25;UBERON:0003914,6.08e-34,117;UBERON:0003081,3.99e-28,203;UBERON:0000490,1.13e-27,148;UBERON:0003915,3.20e-26,9;UBERON:0004700,3.20e-26,9;UBERON:0001917,3.20e-26,9;UBERON:0000947,3.99e-25,21;UBERON:0010191,3.99e-25,21;UBERON:0004237,3.42e-18,10;UBERON:0004695,3.42e-18,10;UBERON:0002111,3.42e-18,10;UBERON:0004178,3.42e-18,10;UBERON:0004111,1.20e-16,240;UBERON:0000025,2.04e-16,192;UBERON:0007503,9.63e-16,78;UBERON:0000926,2.14e-15,315;UBERON:0004120,2.14e-15,315;UBERON:0006603,2.14e-15,315;UBERON:0002329,1.10e-14,71;UBERON:0003059,1.10e-14,71;UBERON:0007282,1.10e-14,71;UBERON:0004290,1.10e-14,71;UBERON:0009618,1.10e-14,71;UBERON:0003077,2.10e-14,72;UBERON:0007285,2.10e-14,72;UBERON:0001134,2.40e-14,62;UBERON:0002036,2.40e-14,62;UBERON:0003082,2.40e-14,62;UBERON:0007524,3.95e-14,73;UBERON:0002385,9.69e-14,64;UBERON:0001015,9.69e-14,64;UBERON:0000383,9.69e-14,64;UBERON:0001473,3.95e-13,8;UBERON:0004536,3.95e-13,8;UBERON:0006558,3.95e-13,8;UBERON:0001638,5.42e-13,9;UBERON:0003920,5.42e-13,9;UBERON:0004582,5.42e-13,9;UBERON:0010260,3.34e-12,9;UBERON:0000486,9.12e-12,83;UBERON:0001135,1.18e-11,15;UBERON:0002204,7.75e-11,167;UBERON:0000483,1.55e-10,306;UBERON:0002465,2.32e-10,10;UBERON:0000119,2.51e-10,309;UBERON:0010523,3.01e-10,3;UBERON:0001915,3.01e-10,3;UBERON:0001621,3.01e-10,3;UBERON:0001982,3.01e-10,3;UBERON:0005256,5.76e-08,122;UBERON:0005800,1.54e-07,2;UBERON:0001515,1.54e-07,2;UBERON:0001529,2.72e-07,2;UBERON:0007204,2.72e-07,2;UBERON:0001310,3.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,5.3786011716142,5.42425075221579,5.11217063271161,4.87932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,2.3015391385772,1.0246428261164,1.6553756092201,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0.989553900560148,1.39624560335142,0.426224750532694,2.61188314765726,1.13477044938228,3.11411124497787,0.502497330513487,0.521482918420201,0.434377689410233,1.21079900526674,5.52416453981347,12.9749578850763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.886917589850256,1.22968699970376,0,0,0,0,0,0,0,0,0,2.38514888840046,1.72046919021225,1.73570250803797,6.78369530308812,7.97048928798821,2.75118041940067,2.92592953151535,1.03366703667732,1.06729878806013,2.00832367658802,21.3499538067848,26.6095237001479,1.70843440283719,21.3244586600604,6.48113558305408,22.6821309841563,27.8416422056451,47.7472677249286,30.6633274931766,10.4419222552494,16.8545604415975,0,0,0,0,0.506522046658319,0,0,0.709336764396714,0,0,0,0,0.538842688278752,0.326923806226917,0,0,0,1.24864030732128,1.1409436430889,0.896692083310806,0.704606991862589,0.647491777472526,0.140450806702248,0,0.859840221182376,0,0,0,0,0,0.168336113954066,0.625592599359821,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,2.88662684050547,28.7507404338191,0,19.3451039999839,6.48179717607255,34.0554932499931,0,0,0,0,0,1.87467667973554,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,4.59253004246592,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,1.3940745403212,1.23213432070436,2.66153015158511,7.82939692867565,5.37440235401368,6.29749501664761,0,0,0,0,0,1.27281299170375,0.78494864019923,0,0,0,3.43710218674637,9.5106192703805,8.42516912477962,0,0.731140468893853,1.05650146756755,0,0,0,0,3.98063385144732,16.2226827543892,0,0,2.63783490051515,1.8589409885985,0,0,0,2.85336841185,0.354761064070598,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,53.5887896311291,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0.466311601748341,2.36568239983414,0.477890301491107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.9902337890485,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0,0.333694205676207,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,1.45771421354797,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:186946626..186946652,+ | |||
}} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:186946626..186946652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186946626..186946652, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data