FFCP PHASE1:Hg19::chr1:176760336..176760340,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14615 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-240bp_to_ENST00000479836_5end | |||
|cluster_id=chr1:176760336..176760340,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_PAPPA2_5end | |||
|id=chr1:176760336..176760340,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.14e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.18e-38;3!CL:0000307;1.14e-10;3!CL:0000349;6.38e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.18e-38,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000349,6.38e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.33e-29;1!CL:0000377;1.14e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.14e-09!3;UBERON:0000920!2.14e-09!3;UBERON:0005631!3.55e-09!14;UBERON:0000158!3.55e-09!14;UBERON:0002110!1.79e-08!3;UBERON:0006242!1.79e-08!3;UBERON:0000478!6.60e-08!24;UBERON:0003124!6.76e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.18e-38;3!UBERON:0000920;2.18e-38;3!UBERON:0005631;2.66e-12;10!UBERON:0000158;2.66e-12;10!UBERON:0000478;2.43e-11;24!UBERON:0001987;1.96e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.18e-38,3;UBERON:0003124,7.12e-37,7;UBERON:0005631,6.89e-19,14;UBERON:0000158,6.89e-19,14;UBERON:0000478,2.43e-11,24;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4071421764199,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,12.7094131048652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,3.19001159731919,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.126621591911757,0.195551382734803,0.160317640503067,0.213452994739353,0,0,0,0,0.288109595976299,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7899279887825,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@PAPPA2 | |||
}} |
Latest revision as of 20:25, 18 September 2015
Short description: | p3@PAPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAPPA2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -240bp_to_ENST00000479836_5end |
EntrezGene: | PAPPA2 |
HGNC: | 14615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.18e-38 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
extraembryonic cell | 6.38e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.18e-38 | 3 |
chorion | 7.12e-37 | 7 |
extraembryonic membrane | 6.89e-19 | 14 |
membranous layer | 6.89e-19 | 14 |
extraembryonic structure | 2.43e-11 | 24 |
placenta | 1.96e-08 | 4 |
allantois | 1.96e-08 | 4 |