FFCP PHASE1:Hg19::chr1:160681984..160682004,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1683 | |||
|TSSclassifier=strong | |||
|UniProt=P09326 | |||
|association_with_transcript=-343bp_to_ENST00000368046_5end | |||
|cluster_id=chr1:160681984..160682004,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_CD48_5end | |||
|id=chr1:160681984..160682004,- | |||
|ontology_enrichment_celltype=CL:0002057!4.29e-94!42;CL:0000860!3.66e-87!45;CL:0002194!5.76e-69!63;CL:0000576!5.76e-69!63;CL:0000040!5.76e-69!63;CL:0000559!5.76e-69!63;CL:0002009!1.47e-66!65;CL:0002087!2.61e-66!119;CL:0000766!3.79e-65!76;CL:0000738!2.60e-64!140;CL:0000839!3.87e-61!70;CL:0000557!3.81e-60!71;CL:0002031!5.27e-58!124;CL:0000037!4.96e-50!172;CL:0000566!4.96e-50!172;CL:0000988!1.37e-46!182;CL:0002032!1.80e-46!165;CL:0000837!1.80e-46!165;CL:0000763!6.55e-41!112;CL:0000049!6.55e-41!112;CL:0002393!1.47e-21!9;CL:0002397!1.47e-21!9;CL:0000134!2.31e-18!358;CL:0002320!9.28e-18!365;CL:0000219!1.24e-15!390;CL:0000048!4.36e-13!430;CL:0000723!1.00e-12!436;CL:0000034!2.93e-12!444;CL:0000875!4.52e-10!3;CL:0002396!4.52e-10!3;CL:0000767!7.67e-10!3;CL:0000838!8.35e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.61e-110;33!CL:0002057;9.61e-110;33!CL:0000473;7.20e-75;39!CL:0000234;7.20e-75;39!CL:0000576;6.22e-56;48!CL:0000766;6.18e-31;69!CL:0002087;9.12e-16;104!CL:0000763;7.03e-14;100!CL:0000738;4.52e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.41e-110,42;CL:0002057,1.41e-110,42;CL:0000473,2.62e-96,48;CL:0000234,2.62e-96,48;CL:0002194,2.52e-76,59;CL:0000576,2.52e-76,59;CL:0000040,2.52e-76,59;CL:0000559,2.52e-76,59;CL:0002009,9.59e-74,61;CL:0000839,5.73e-68,66;CL:0000557,6.48e-67,67;CL:0000766,4.43e-62,72;CL:0000763,2.44e-40,108;CL:0000049,2.44e-40,108;CL:0002087,1.12e-37,115;CL:0002031,5.82e-36,120;CL:0000738,2.59e-31,136;CL:0002032,7.01e-26,161;CL:0000837,7.01e-26,161;CL:0000037,1.20e-24,168;CL:0000988,3.35e-23,177;CL:0000134,1.36e-09,354;CL:0002320,2.52e-09,361;CL:0000219,2.21e-08,386;CL:0000048,3.18e-07,427;CL:0000723,4.60e-07,433;CL:0000034,7.41e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.73e-80;42!CL:0000049;3.62e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.63e-52!80;UBERON:0002390!3.60e-48!102;UBERON:0003061!3.60e-48!102;UBERON:0001474!5.55e-48!86;UBERON:0002193!6.30e-43!112;UBERON:0004765!2.10e-39!101;UBERON:0001434!2.10e-39!101;UBERON:0002405!2.82e-37!115;UBERON:0002204!6.31e-20!167;UBERON:0003081!3.90e-17!216;UBERON:0002384!6.18e-17!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-58,76;UBERON:0001474,3.74e-54,82;UBERON:0004765,4.59e-49,90;UBERON:0002405,2.22e-47,93;UBERON:0002390,8.51e-45,98;UBERON:0003061,8.51e-45,98;UBERON:0001434,7.79e-44,100;UBERON:0002193,2.44e-40,108;UBERON:0002204,8.13e-25,167;UBERON:0003081,9.72e-20,203;UBERON:0000926,2.70e-11,315;UBERON:0004120,2.70e-11,315;UBERON:0006603,2.70e-11,315;UBERON:0002384,5.84e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0.426507697462265,0,1.66198622559563,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,2.55671940596253,3.70051099219643,2.16794459626573,1.1507695692886,1.5369642391746,2.60130452877444,3.10271112662957,3.22742341791913,1.35426486594342,0.752969358170419,0.545812300115692,1.12361742222542,1.83650335422542,3.20929027076094,1.91801137739712,0,1.19678194572979,0,3.77272010217159,2.8369261234557,4.9825779919646,2.76373531782418,1.5644487552606,2.17188844705117,3.63239701580021,5.89244217580104,8.54448446090388,0.633765858935825,1.91343869968539,0.838634582033504,0,0.150176892841506,0,0.855038231223746,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CD48 | |||
}} |
Latest revision as of 03:09, 18 September 2015
Short description: | p4@CD48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD48_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -343bp_to_ENST00000368046_5end |
EntrezGene: | CD48 |
HGNC: | 1683 |
UniProt: | P09326 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.41e-110 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-110 | 42 |
defensive cell | 2.62e-96 | 48 |
phagocyte | 2.62e-96 | 48 |
monopoietic cell | 2.52e-76 | 59 |
monocyte | 2.52e-76 | 59 |
monoblast | 2.52e-76 | 59 |
promonocyte | 2.52e-76 | 59 |
macrophage dendritic cell progenitor | 9.59e-74 | 61 |
myeloid lineage restricted progenitor cell | 5.73e-68 | 66 |
granulocyte monocyte progenitor cell | 6.48e-67 | 67 |
myeloid leukocyte | 4.43e-62 | 72 |
myeloid cell | 2.44e-40 | 108 |
common myeloid progenitor | 2.44e-40 | 108 |
nongranular leukocyte | 1.12e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 5.82e-36 | 120 |
leukocyte | 2.59e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.01e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.01e-26 | 161 |
hematopoietic stem cell | 1.20e-24 | 168 |
hematopoietic cell | 3.35e-23 | 177 |
mesenchymal cell | 1.36e-09 | 354 |
connective tissue cell | 2.52e-09 | 361 |
motile cell | 2.21e-08 | 386 |
multi fate stem cell | 3.18e-07 | 427 |
somatic stem cell | 4.60e-07 | 433 |
stem cell | 7.41e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-58 | 76 |
bone element | 3.74e-54 | 82 |
skeletal element | 4.59e-49 | 90 |
immune system | 2.22e-47 | 93 |
hematopoietic system | 8.51e-45 | 98 |
blood island | 8.51e-45 | 98 |
skeletal system | 7.79e-44 | 100 |
hemolymphoid system | 2.44e-40 | 108 |
musculoskeletal system | 8.13e-25 | 167 |
lateral plate mesoderm | 9.72e-20 | 203 |
mesoderm | 2.70e-11 | 315 |
mesoderm-derived structure | 2.70e-11 | 315 |
presumptive mesoderm | 2.70e-11 | 315 |
connective tissue | 5.84e-09 | 371 |