FFCP PHASE1:Hg19::chr1:155292487..155292538,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-264bp_to_ENST00000467820_5end | |||
|cluster_id=chr1:155292487..155292538,+ | |||
|description=CAGE_peak_7_at_RUSC1_5end | |||
|id=chr1:155292487..155292538,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002595;2.10e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,5.33e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-22!94;UBERON:0001016!1.03e-22!94;UBERON:0001017!7.16e-22!82;UBERON:0005743!1.01e-21!86;UBERON:0001049!3.63e-21!57;UBERON:0005068!3.63e-21!57;UBERON:0006241!3.63e-21!57;UBERON:0007135!3.63e-21!57;UBERON:0000025!5.67e-21!194;UBERON:0000955!1.35e-18!69;UBERON:0006238!1.35e-18!69;UBERON:0002616!3.81e-18!59;UBERON:0003075!2.20e-17!86;UBERON:0007284!2.20e-17!86;UBERON:0007023!6.28e-17!115;UBERON:0004111!2.17e-16!241;UBERON:0003080!2.22e-16!42;UBERON:0002780!1.08e-15!41;UBERON:0001890!1.08e-15!41;UBERON:0006240!1.08e-15!41;UBERON:0002346!2.93e-15!90;UBERON:0000477!1.62e-12!286;UBERON:0002020!2.62e-12!34;UBERON:0003528!2.62e-12!34;UBERON:0001893!2.90e-12!34;UBERON:0003056!7.26e-12!61;UBERON:0002791!8.71e-12!33;UBERON:0001869!2.81e-11!32;UBERON:0000483!5.25e-11!309;UBERON:0000119!6.39e-11!312;UBERON:0000468!3.01e-10!659;UBERON:0000480!3.80e-10!626;UBERON:0000467!9.20e-10!625;UBERON:0004121!4.92e-09!169;UBERON:0000956!1.00e-08!25;UBERON:0000203!1.00e-08!25;UBERON:0000922!1.53e-08!612;UBERON:0000924!4.22e-08!173;UBERON:0006601!4.22e-08!173;UBERON:0002050!5.09e-08!605;UBERON:0005423!5.09e-08!605;UBERON:0000033!5.80e-08!123;UBERON:0000923!7.03e-08!604;UBERON:0005291!7.03e-08!604;UBERON:0006598!7.03e-08!604;UBERON:0002532!7.03e-08!604;UBERON:0002619!7.09e-08!22;UBERON:0000153!9.64e-08!129;UBERON:0007811!9.64e-08!129;UBERON:0001950!6.70e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;1.08e-08;3!UBERON:0003834;2.10e-08;5!UBERON:0001533;2.10e-08;5!UBERON:0002298;2.95e-07;6!UBERON:0002780;4.31e-07;41!UBERON:0001890;4.31e-07;41!UBERON:0000073;4.91e-07;53!UBERON:0002616;4.91e-07;53!UBERON:0004732;4.96e-07;13!UBERON:0003528;6.95e-07;34!UBERON:0002020;6.95e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-13,89;UBERON:0001017,6.58e-13,81;UBERON:0003075,7.51e-13,82;UBERON:0007284,7.51e-13,82;UBERON:0001049,8.39e-13,56;UBERON:0005068,8.39e-13,56;UBERON:0006241,8.39e-13,56;UBERON:0007135,8.39e-13,56;UBERON:0000073,3.46e-12,53;UBERON:0002616,3.46e-12,53;UBERON:0002346,5.75e-12,86;UBERON:0000955,5.76e-12,68;UBERON:0006238,5.76e-12,68;UBERON:0007023,2.43e-11,114;UBERON:0000025,4.33e-10,192;UBERON:0010371,7.36e-09,104;UBERON:0002780,1.61e-08,41;UBERON:0001890,1.61e-08,41;UBERON:0003080,1.61e-08,41;UBERON:0006240,1.61e-08,41;UBERON:0000988,2.09e-08,3;UBERON:0004111,3.72e-08,240;UBERON:0003834,5.33e-08,5;UBERON:0001533,5.33e-08,5;UBERON:0010314,6.71e-08,132;UBERON:0003528,6.86e-08,34;UBERON:0002020,6.86e-08,34;UBERON:0003056,1.20e-07,61;UBERON:0004121,4.25e-07,171;UBERON:0000924,4.25e-07,171;UBERON:0006601,4.25e-07,171;UBERON:0002298,4.91e-07,6;UBERON:0004732,6.67e-07,13;UBERON:0002133,7.26e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.401088894940283,1.08505435357926,0,0,0,0.290796477559129,0,0.485168122375632,0.697287110717054,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0.918251677112708,0,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0,1.13477044938228,0,0,1.0429658368404,0.434377689410233,2.42159801053347,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0.570025487482497,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.189069634328136,0.665188192387692,0.351339142772504,0.589405839739707,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,1.62028389576352,0.357198913136319,0.673588117878509,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.25326102332916,0.529636723252875,0.860509862246441,0.709336764396714,0,1.06748995729705,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,0.70296429550139,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0.232387885739037,1.0366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0,1.3032332212413,0,0,0.231860809950154,0,0.866198686566443,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.126995788584338,0.381988425558278,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0.336393253036082,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,1.62786481617433,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.508189248444927,0,3.09315525111078,0.502548796003046,1.91381625495949,0.749007023947182,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,0.535286966391485,0,0,0,0,0,0,0.553107505625109,0.173767228936166,0.587403472388222,0.343143423810856,0,0.647142602455851,0.213455115606889,0,1.66435439510497,0,0.248107807818777,0.61384789315225,0.841980283299221,0.128139149255701,0,0.482561763430822,0,0,0.355123450626254,0.0821271560138091,1.55776328755086,0.232420756919918,0,0,0,0,0,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.422206515571503,0,0.340187410553031,0.647747748306418,3.08454505380579,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.915694648183434,0.990113999047056,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0,0.255679882248303,0.267096106940212,0.330569830721956,0.576570202095319,0.255225424989168,0.2023155617111,0,0.94443704049192,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0.48763373908959,1.21856744815642,1.05650146756755,0,0,0,1.10273068709225,0,1.31535265576129,0.578775534266688,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0.286822704408103,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0.476463550915578,0,0,0,0,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0.844016498463076,0.445234820091624,0.16480387422676,0.844501632511974,1.39473591775749,0.552567831062295,0,1.32949287252801,0,0.622079175323615,0,0,0,0.591860433821602,0,0,0,0.371072392647405,5.98841394003583,0,0.524759999977174,3.62499787717397,0,0.508507300585533,0.236387681767936,1.03423011972439,0,1.56262495439963,0.885741385813839,0.482385754501632,0,3.98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| |||
|short_description=p7@RUSC1 | |||
}} |
Latest revision as of 12:36, 17 September 2015
Short description: | p7@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RUSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -264bp_to_ENST00000467820_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.47e-13 | 89 |
central nervous system | 6.58e-13 | 81 |
neural plate | 7.51e-13 | 82 |
presumptive neural plate | 7.51e-13 | 82 |
neural tube | 8.39e-13 | 56 |
neural rod | 8.39e-13 | 56 |
future spinal cord | 8.39e-13 | 56 |
neural keel | 8.39e-13 | 56 |
regional part of nervous system | 3.46e-12 | 53 |
regional part of brain | 3.46e-12 | 53 |
neurectoderm | 5.75e-12 | 86 |
brain | 5.76e-12 | 68 |
future brain | 5.76e-12 | 68 |
adult organism | 2.43e-11 | 114 |
tube | 4.33e-10 | 192 |
ecto-epithelium | 7.36e-09 | 104 |
regional part of forebrain | 1.61e-08 | 41 |
forebrain | 1.61e-08 | 41 |
anterior neural tube | 1.61e-08 | 41 |
future forebrain | 1.61e-08 | 41 |
pons | 2.09e-08 | 3 |
anatomical conduit | 3.72e-08 | 240 |
thoracic segment blood vessel | 5.33e-08 | 5 |
subclavian artery | 5.33e-08 | 5 |
structure with developmental contribution from neural crest | 6.71e-08 | 132 |
brain grey matter | 6.86e-08 | 34 |
gray matter | 6.86e-08 | 34 |
pre-chordal neural plate | 1.20e-07 | 61 |
ectoderm-derived structure | 4.25e-07 | 171 |
ectoderm | 4.25e-07 | 171 |
presumptive ectoderm | 4.25e-07 | 171 |
brainstem | 4.91e-07 | 6 |
segmental subdivision of nervous system | 6.67e-07 | 13 |
atrioventricular valve | 7.26e-07 | 2 |