FFCP PHASE1:Hg19::chr1:144932464..144932503,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_uc001emf.1_5end | |||
|cluster_id=chr1:144932464..144932503,- | |||
|description=CAGE_peak_15_at_PDE4DIP_5end | |||
|id=chr1:144932464..144932503,- | |||
|ontology_enrichment_celltype=CL:0000066!2.47e-14!254;CL:0002076!2.02e-09!43;CL:0000223!6.25e-09!59;CL:0000838!1.48e-08!52;CL:0000542!2.29e-08!53;CL:0000051!2.29e-08!53;CL:0000084!7.60e-07!25;CL:0000827!7.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.91e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.18e-14,253;CL:0002076,2.95e-13,42;CL:0000223,1.51e-12,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.44e-07;58 | |||
|ontology_enrichment_disease=DOID:305!7.89e-18!106;DOID:0050687!1.03e-12!143;DOID:1749!7.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.91e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-19,106;DOID:0050687,1.05e-12,143;DOID:1749,1.31e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.87e-14!169;UBERON:0000925!9.87e-14!169;UBERON:0006595!9.87e-14!169;UBERON:0001007!1.11e-11!155;UBERON:0001555!1.11e-11!155;UBERON:0007026!1.11e-11!155;UBERON:0004921!1.77e-11!129;UBERON:0004185!1.77e-11!129;UBERON:0000077!1.34e-10!130;UBERON:0005911!2.90e-09!82;UBERON:0001004!9.46e-09!72;UBERON:0000065!1.71e-08!53;UBERON:0001041!3.77e-08!98;UBERON:0008947!3.99e-07!38;UBERON:0003258!3.99e-07!38 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.42e-14,160;UBERON:0000925,2.42e-14,160;UBERON:0006595,2.42e-14,160;UBERON:0004921,4.27e-12,118;UBERON:0001007,6.27e-12,145;UBERON:0001555,6.27e-12,145;UBERON:0007026,6.27e-12,145;UBERON:0005911,2.95e-11,82;UBERON:0001004,3.97e-10,74;UBERON:0001041,7.43e-10,87;UBERON:0000065,1.93e-08,54;UBERON:0005153,4.31e-08,37;UBERON:0008947,3.46e-07,38;UBERON:0003258,3.46e-07,38 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,1.22866968250754,0.697801167972428,4.36882744260345,2.63766978228454,0.37129905888014,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.410623275218653,0.251085279189606,1.14620108621927,0.985207073399349,1.49550484495991,0,0,0.464448369948228,4.59710612239464,1.8072355126695,1.47901604066715,0.774672005803016,0.142169232487422,0.293600439334847,0,0.401088894940283,0.434021741431704,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,4.44754626931777,4.26730222566507,2.40237592221607,3.4485146397269,0.661044872784862,1.90810750907073,1.1384259382189,0.587237189370939,1.52909291250092,1.32171328579026,0,0.263384084775077,4.32761494250433,0.786021525498329,2.87842098599313,0.167186495390678,5.21475626613745,4.73447805734733,1.94826728407911,1.11410456885174,2.94605907474837,1.55073726208535,1.08321545506006,1.40900451698243,1.04047478047903,1.80881695064044,1.10540007114339,2.89803085735052,4.74517002118593,3.21048993707656,2.09071047609954,1.13309342697566,2.68254345521345,6.52892146416997,2.78321661221453,5.09704662918555,3.90650072313851,3.8018081777935,3.91495309602209,2.68771883424279,8.74515085866421,3.31488152861624,0.821127996921047,0.403213486449465,0.534880391567015,2.02754165435919,0,1.34140171940727,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,0.567208902984407,1.10864698731282,0.790513071238134,0.72038491523742,0.364295288292542,0.741568885568859,0.649094787309367,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0.673588117878509,0.675668882899933,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0,0.312160076830321,0.570471821544449,0,0.352303495931295,0.161872944368132,0.702254033511242,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0,0.30648779579902,0.150238058906597,0.567160915800105,0.179389635688862,0,0.211931901159562,0,0.515262646192195,0.515281080091258,0.18611685633159,0.506328996723799,0,0.757301322732344,0.0920498986422993,0.161646056818812,0,0,0.67824236924195,3.67195621010264,3.00020732649918,2.00763216772303,1.21973706129595,0.927708378250397,1.04574548582567,0.829288440122964,1.00928340350251,1.45990943630332,0,0,0,0,0,1.41968160047813,1.68584690078102,2.16909926895134,1.7647035637183,2.39667388501647,0.949082476444386,2.02246962240247,0.392442930250692,0.769494313892781,0,0,0,1.47008711385542,3.80265104465493,2.94848165003288,4.72631925345123,2.6487785964879,4.18160691046586,0.343135620597051,1.64625428112938,0,2.41269533787914,6.94413338688972,0,0,1.44331342025273,0,0.469634776943287,0.288732895522148,0.462985512576611,0.380508304469197,9.4824527755113,4.29243081047436,0,0.468008530278475,0.148631162288728,1.87467667973554,2.35174979478403,3.40260233381728,3.58234090811393,1.16253575405585,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,1.20575750823834,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0.560425719967636,0.985153801009636,0.215627574859517,0.513372145118994,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0.535286966391485,0.473107245101804,0.468565659970853,0,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,2.06768026122887,1.72571360654893,2.881644060693,3.03127571446259,0,4.83824469327489,0.496215615637554,0.153461973288062,0.280660094433074,0.384417447767103,0,0.160853921143607,1.48418066444991,0.462629081407967,0.177561725313127,0.492762936082855,1.03850885836724,0.232420756919918,4.23008073570678,2.20557117333613,1.38121483403844,0,0.364182336013434,0.262248829918848,0,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.270946437543853,2.00675909541941,0.764628819135115,1.66215201785745,0.895499018888713,0,0.261435451024901,0.512900250232778,0.656029291399411,0.650756789328606,3.50339439602256,0.640986253728404,0.41254749960294,1.14853107599234,2.60024098414608,0,0,0.770243085573222,1.38153307253517,0.137836572484531,0.214840489736547,0.290033387828457,0.511359764496605,0.356128142586949,3.8015530533025,1.15314040419064,5.35973392477253,0.6069466851333,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0.429374660225974,0,1.2655176988749,0.571890581771475,0,0,0.95460974377781,0.78494864019923,0.539617372749944,0.54907405947211,0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| |||
|short_description=p15@PDE4DIP | |||
}} |
Latest revision as of 16:46, 16 September 2015
Short description: | p15@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PDE4DIP_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_uc001emf.1_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.18e-14 | 253 |
endo-epithelial cell | 2.95e-13 | 42 |
endodermal cell | 1.51e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.42e-14 | 160 |
endoderm | 2.42e-14 | 160 |
presumptive endoderm | 2.42e-14 | 160 |
subdivision of digestive tract | 4.27e-12 | 118 |
digestive system | 6.27e-12 | 145 |
digestive tract | 6.27e-12 | 145 |
primitive gut | 6.27e-12 | 145 |
endo-epithelium | 2.95e-11 | 82 |
respiratory system | 3.97e-10 | 74 |
foregut | 7.43e-10 | 87 |
respiratory tract | 1.93e-08 | 54 |
epithelial bud | 4.31e-08 | 37 |
respiratory primordium | 3.46e-07 | 38 |
endoderm of foregut | 3.46e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-19 | 106 |
cell type cancer | 1.05e-12 | 143 |
squamous cell carcinoma | 1.31e-08 | 14 |