FFCP PHASE1:Hg19::chr8:87755854..87755877,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:87755854..87755877,-
|short_description=p1@CNGB3
|description=CAGE_peak_1_at_CNGB3_5end
|association_with_transcript=-17bp_to_ENST00000519777_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54714 | |EntrezGene=54714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |HGNC=2153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000519777_5end | |||
|cluster_id=chr8:87755854..87755877,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_CNGB3_5end | |||
|id=chr8:87755854..87755877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.67e-09;3!CL:0000149;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.67e-09,3;CL:0000149,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.19e-09;3 | |||
|ontology_enrichment_disease=DOID:3347!6.14e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.70e-21!2;UBERON:0002757!7.70e-21!2;UBERON:0010134!7.70e-21!2;UBERON:0002784!7.70e-21!2;UBERON:0005408!7.70e-21!2;UBERON:0001899!7.70e-21!2;UBERON:0002298!4.75e-19!8;UBERON:0000966!6.64e-18!5;UBERON:0005388!6.64e-18!5;UBERON:0001802!6.64e-18!5;UBERON:0005743!2.83e-16!86;UBERON:0000073!1.43e-14!94;UBERON:0001016!1.43e-14!94;UBERON:0007023!6.35e-14!115;UBERON:0003075!6.60e-14!86;UBERON:0007284!6.60e-14!86;UBERON:0006331!9.60e-14!3;UBERON:0001896!2.65e-13!3;UBERON:0005290!2.65e-13!3;UBERON:0010096!2.65e-13!3;UBERON:0002346!3.26e-13!90;UBERON:0001017!4.94e-12!82;UBERON:0003296!6.78e-11!4;UBERON:0010133!6.78e-11!4;UBERON:0002038!7.46e-11!1;UBERON:0009661!7.46e-11!1;UBERON:0006834!9.05e-11!1;UBERON:0003076!2.91e-10!15;UBERON:0003057!2.91e-10!15;UBERON:0000955!1.27e-09!69;UBERON:0006238!1.27e-09!69;UBERON:0001049!1.61e-09!57;UBERON:0005068!1.61e-09!57;UBERON:0006241!1.61e-09!57;UBERON:0007135!1.61e-09!57;UBERON:0000970!6.17e-08!20;UBERON:0004733!1.33e-07!12;UBERON:0002028!1.33e-07!12;UBERON:0007277!1.33e-07!12;UBERON:0002104!1.45e-07!21;UBERON:0000033!1.49e-07!123;UBERON:0004121!2.69e-07!169;UBERON:0000153!3.97e-07!129;UBERON:0007811!3.97e-07!129;UBERON:0000924!4.40e-07!173;UBERON:0006601!4.40e-07!173;UBERON:0002616!4.55e-07!59;UBERON:0004732!4.71e-07!13;UBERON:0000020!6.45e-07!23;UBERON:0003056!6.88e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;9.93e-21;5!UBERON:0005388;9.93e-21;5!UBERON:0001802;9.93e-21;5!UBERON:0001894;2.47e-15;7!UBERON:0002360;9.40e-14;2!UBERON:0000094;9.40e-14;2!UBERON:0010743;9.40e-14;2!UBERON:0002148;1.55e-13;2!UBERON:0006331;1.55e-13;2!UBERON:0009662;1.55e-13;2!UBERON:0000970;7.97e-12;20!UBERON:0002104;2.70e-11;21!UBERON:0000020;2.26e-10;23!UBERON:0001032;5.74e-10;24!UBERON:0004456;5.74e-10;24!UBERON:0001781;1.67e-09;3!UBERON:0001782;1.67e-09;3!UBERON:0000988;1.81e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,1.85e-17,6;UBERON:0005388,1.85e-17,6;UBERON:0001802,1.85e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0002360,9.40e-14,2;UBERON:0000094,9.40e-14,2;UBERON:0010743,9.40e-14,2;UBERON:0002148,1.55e-13,2;UBERON:0006331,1.55e-13,2;UBERON:0009662,1.55e-13,2;UBERON:0000970,2.70e-11,21;UBERON:0002104,2.70e-11,21;UBERON:0000020,5.74e-10,24;UBERON:0001032,5.74e-10,24;UBERON:0004456,5.74e-10,24;UBERON:0001782,1.67e-09,3;UBERON:0005424,1.67e-09,3;UBERON:0000988,1.81e-09,3;UBERON:0001017,1.04e-07,81;UBERON:0003075,1.04e-07,82;UBERON:0007284,1.04e-07,82;UBERON:0001781,1.92e-07,4;UBERON:0002346,2.32e-07,86;UBERON:0001016,5.74e-07,89;UBERON:0004121,5.82e-07,171;UBERON:0000924,5.82e-07,171;UBERON:0006601,5.82e-07,171;UBERON:0003056,7.52e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90454073597164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7702171694718,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87549926029384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,4.70385358783185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2721.3653262617,1753.71961137117,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,39.3835758413376,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90454073597164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7702171694718,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87549926029384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,4.70385358783185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2721.3653262617,1753.71961137117,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,39.3835758413376,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p1@CNGB3 | |||
}} | }} |
Latest revision as of 08:43, 19 September 2015
Short description: | p1@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNGB3_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -17bp_to_ENST00000519777_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.67e-09 | 3 |
visual pigment cell | 1.92e-07 | 4 |