FFCP PHASE1:Hg19::chr19:6711060..6711085,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-92bp_to_ENST00000466344_5end | |||
|cluster_id=chr19:6711060..6711085,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_C3_5end | |||
|id=chr19:6711060..6711085,- | |||
|ontology_enrichment_celltype=CL:0000181!4.20e-07!12;CL:0000417!4.20e-07!12;CL:0000668!4.20e-07!12;CL:0000414!4.20e-07!12;CL:0000412!4.20e-07!12;CL:0000182!4.20e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.41e-18;12!CL:0002593;1.14e-09;2!CL:0002595;1.16e-08;5!CL:0000622;2.20e-08;5!CL:0000154;4.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.11e-18,12;CL:0002593,1.55e-09,2;CL:0002595,1.41e-08,5;CL:0000622,1.88e-08,5;CL:0000154,4.10e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.70e-14;11!UBERON:0009497;5.31e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.77e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.94e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-18!115;UBERON:0004111!1.53e-12!241;UBERON:0000477!7.40e-12!286;UBERON:0007100!4.23e-11!27;UBERON:0000025!5.89e-11!194;UBERON:0000948!2.49e-09!24;UBERON:0005498!2.49e-09!24;UBERON:0004140!2.49e-09!24;UBERON:0009881!2.49e-09!24;UBERON:0004141!2.49e-09!24;UBERON:0003084!2.49e-09!24;UBERON:0007005!2.49e-09!24;UBERON:0004139!2.49e-09!24;UBERON:0004291!2.49e-09!24;UBERON:0003914!1.69e-08!118;UBERON:0009497!3.81e-08!25;UBERON:0000015!3.81e-08!25;UBERON:0002423!3.81e-08!25;UBERON:0006235!3.81e-08!25;UBERON:0004161!3.81e-08!25;UBERON:0002107!3.90e-08!19;UBERON:0006925!3.90e-08!19;UBERON:0008836!3.90e-08!19;UBERON:0009854!4.41e-08!23;UBERON:0002365!4.97e-08!31;UBERON:0002330!4.97e-08!31;UBERON:0000481!5.29e-08!347;UBERON:0000483!8.30e-08!309;UBERON:0000119!1.67e-07!312;UBERON:0008835!2.10e-07!22;UBERON:0003894!2.10e-07!22;UBERON:0000468!5.82e-07!659;UBERON:0000467!7.11e-07!625;UBERON:0000480!8.53e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.88e-18;19!UBERON:0006925;2.88e-18;19!UBERON:0002365;3.93e-18;31!UBERON:0002330;3.93e-18;31!UBERON:0002423;1.73e-13;25!UBERON:0002456;1.14e-09;2!UBERON:0002368;5.85e-09;33!UBERON:0003834;1.16e-08;5!UBERON:0001533;1.16e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.85e-19,31;UBERON:0002330,6.85e-19,31;UBERON:0002107,1.79e-18,19;UBERON:0006925,1.79e-18,19;UBERON:0008836,1.79e-18,19;UBERON:0008835,1.00e-15,22;UBERON:0003894,1.00e-15,22;UBERON:0009854,5.70e-15,23;UBERON:0007499,1.22e-13,25;UBERON:0009497,1.22e-13,25;UBERON:0000015,1.22e-13,25;UBERON:0002423,1.22e-13,25;UBERON:0006235,1.22e-13,25;UBERON:0004161,1.22e-13,25;UBERON:0009856,4.73e-13,26;UBERON:0003914,7.05e-11,117;UBERON:0002456,1.55e-09,2;UBERON:0002368,2.83e-09,35;UBERON:0002530,9.82e-09,59;UBERON:0003834,1.41e-08,5;UBERON:0001533,1.41e-08,5;UBERON:0002417,3.73e-07,60;UBERON:0000916,3.73e-07,60;UBERON:0000949,7.32e-07,45;UBERON:0005172,8.58e-07,54;UBERON:0005173,8.58e-07,54 | |||
|phase1_expression=0,1.07050261945492,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0,1.12135520028461,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0.818238361772504,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,29.1536580090211,21.6221987669078,8.86184860022106,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,2.1100756394171,0,3.79897366491817,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0.120859449591622,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,1.95018073810956,0,0,0,0,0,0.214840489736547,0,0,0.178064071293475,0.495854746082934,0,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,1.46228093778771,1.05650146756755,0,0,0,0,3.3171948762061,0.876901770507525,0,0,0,0,0,0,0,0,0,0.422215270595328,3.29294892959902,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.703347082052564,0.667852230137435,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.461701551022782,1.93701494939902,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,2.44849212238722,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,2.97035336011451,0.171986032471617,0,0.219267951258557,0.246346371159628,0.387956065953678,0,0.225980740780532,0,0.397429223405979,0.0633107959558787,0,0.400794101257669,0.640358984218058,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,1.09524303113594,0,0,0,1.95497680890578,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,0.0671834724867263,0.360299883542404,0,1.81201319306614,1.97798060114799,1.28066733322951,0.0984274815147488,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0,0,0,0,3.57347663186684,0.662091970365432,0,0,0,0,0,0,0,0,12.0172831616028,11.9256200020999,0,0.52893040697076,0,0,0.427149650270779,0.314408610199332,0.414239055347196,2.97699613087171,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,2.11739237728355,0,0,0,0,0,0,0,0,1.14420034198462,0.453692771289717,0.15543720058278,0.443565449968902,0,1.79921244865442,0.310525913752519,0,0,1.04349012362347,1.35231848097497,4.18885733385675,0,0,0.859284456339908,0.464033759878494,1.59238355479446,0,0,0,0,0,0.428883182749851,0.521988583930423,0.226705925512272,0,0.244736704506468,0,2.16161013012681,0.877136198314828,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0.49131575253029,0,0,0,0.413373593002368,0,0,0.548257766857182,0.496211178389294,0,1.40538670403555,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0.118193840883968,0,0.39246546425257,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0,0,1.45051314914126,1.19502933965765,0,0,0,0,0,0.22910686854405,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0,1.48798007266701,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,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| |||
|short_description=p12@C3 | |||
}} |
Latest revision as of 18:10, 24 September 2015
Short description: | p12@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -92bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.11e-18 | 12 |
smooth muscle cell of the internal thoracic artery | 1.55e-09 | 2 |
smooth muscle cell of the subclavian artery | 1.41e-08 | 5 |
acinar cell | 1.88e-08 | 5 |
protein secreting cell | 4.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 6.85e-19 | 31 |
exocrine system | 6.85e-19 | 31 |
liver | 1.79e-18 | 19 |
digestive gland | 1.79e-18 | 19 |
liver bud | 1.79e-18 | 19 |
hepatic diverticulum | 1.00e-15 | 22 |
liver primordium | 1.00e-15 | 22 |
digestive tract diverticulum | 5.70e-15 | 23 |
epithelial sac | 1.22e-13 | 25 |
epithelium of foregut-midgut junction | 1.22e-13 | 25 |
anatomical boundary | 1.22e-13 | 25 |
hepatobiliary system | 1.22e-13 | 25 |
foregut-midgut junction | 1.22e-13 | 25 |
septum transversum | 1.22e-13 | 25 |
sac | 4.73e-13 | 26 |
epithelial tube | 7.05e-11 | 117 |
internal thoracic artery | 1.55e-09 | 2 |
endocrine gland | 2.83e-09 | 35 |
gland | 9.82e-09 | 59 |
thoracic segment blood vessel | 1.41e-08 | 5 |
subclavian artery | 1.41e-08 | 5 |
abdominal segment of trunk | 3.73e-07 | 60 |
abdomen | 3.73e-07 | 60 |
endocrine system | 7.32e-07 | 45 |
abdomen element | 8.58e-07 | 54 |
abdominal segment element | 8.58e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.94e-08 | 14 |